RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 HLA-CQ95604 372 aa16.94■□□□□ 0.3
CACNA1A-227ENST00000636549 SOCS6O14544 535 aa16.94■□□□□ 0.3
CACNA1A-227ENST00000636549 MAGEA6P43360 314 aa16.94■□□□□ 0.3
CACNA1A-227ENST00000636549 ADARB1P78563 741 aaKnown RBP16.94■□□□□ 0.3
CACNA1A-227ENST00000636549 OR5D16Q8NGK9 328 aa16.94■□□□□ 0.3
CACNA1A-227ENST00000636549 MUCL1Q96DR8 90 aa16.94■□□□□ 0.3
CACNA1A-227ENST00000636549 FNIP2Q9P278 1114 aa16.94■□□□□ 0.3
CACNA1A-227ENST00000636549 EDARQ9UNE0 448 aa16.94■□□□□ 0.3
CACNA1A-227ENST00000636549 GJE1A6NN92 205 aa16.94■□□□□ 0.3
CACNA1A-227ENST00000636549 EPHA5P54756 1037 aa16.94■□□□□ 0.3
CACNA1A-227ENST00000636549 SLC18B1Q6NT16 456 aa16.94■□□□□ 0.3
CACNA1A-227ENST00000636549 FOXJ1Q92949 421 aa16.94■□□□□ 0.3
CACNA1A-227ENST00000636549 GMLQ99445 158 aa16.94■□□□□ 0.3
CACNA1A-227ENST00000636549 CDC6Q99741 560 aa16.94■□□□□ 0.3
CACNA1A-227ENST00000636549 EN2P19622 333 aaPredicted RBP16.93■□□□□ 0.3
CACNA1A-227ENST00000636549 RAB6AP20340 208 aa16.93■□□□□ 0.3
CACNA1A-227ENST00000636549 PTGER4P35408 488 aa16.93■□□□□ 0.3
CACNA1A-227ENST00000636549 EMP2P54851 167 aa16.93■□□□□ 0.3
CACNA1A-227ENST00000636549 FOXC1Q12948 553 aa16.93■□□□□ 0.3
CACNA1A-227ENST00000636549 PTGR1Q14914 329 aa16.93■□□□□ 0.3
CACNA1A-227ENST00000636549 PIGGQ5H8A4 983 aa16.93■□□□□ 0.3
CACNA1A-227ENST00000636549 LCMT2O60294 686 aaKnown RBP16.93■□□□□ 0.3
CACNA1A-227ENST00000636549 DLX3O60479 287 aa16.93■□□□□ 0.3
CACNA1A-227ENST00000636549 FOXD2O60548 495 aaPredicted RBP16.93■□□□□ 0.3
CACNA1A-227ENST00000636549 SERPINA5P05154 406 aa16.93■□□□□ 0.3
CACNA1A-227ENST00000636549 TFPTP0C1Z6 253 aa16.93■□□□□ 0.3
CACNA1A-227ENST00000636549 MYOGP15173 224 aa16.93■□□□□ 0.3
CACNA1A-227ENST00000636549 UBAC2Q8NBM4 344 aa16.93■□□□□ 0.3
CACNA1A-227ENST00000636549 MSANTD3Q96H12 275 aa16.93■□□□□ 0.3
CACNA1A-227ENST00000636549 C7orf26Q96N11 449 aa16.93■□□□□ 0.3
CACNA1A-227ENST00000636549 WIF1Q9Y5W5 379 aa16.93■□□□□ 0.3
CACNA1A-227ENST00000636549 LRRTM2O43300 516 aa16.93■□□□□ 0.3
CACNA1A-227ENST00000636549 PAX6P26367 422 aa16.93■□□□□ 0.3
CACNA1A-227ENST00000636549 ARL16Q0P5N6 197 aa16.93■□□□□ 0.3
CACNA1A-227ENST00000636549 RAB11BQ15907 218 aa16.93■□□□□ 0.3
CACNA1A-227ENST00000636549 RNF38Q9H0F5 515 aa16.93■□□□□ 0.3
CACNA1A-227ENST00000636549 SMOC2Q9H3U7 446 aa16.93■□□□□ 0.3
CACNA1A-227ENST00000636549 TTLL8A6PVC2 850 aa16.93■□□□□ 0.3
CACNA1A-227ENST00000636549 KDM4EB2RXH2 506 aaPredicted RBP16.93■□□□□ 0.3
CACNA1A-227ENST00000636549 EMC8O43402 210 aa16.93■□□□□ 0.3
CACNA1A-227ENST00000636549 ZNF217O75362 1048 aa16.93■□□□□ 0.3
CACNA1A-227ENST00000636549 C1GALT1C1LP0DN25 315 aa16.93■□□□□ 0.3
CACNA1A-227ENST00000636549 GCGRP47871 477 aa16.93■□□□□ 0.3
CACNA1A-227ENST00000636549 P2RY14Q15391 338 aa16.93■□□□□ 0.3
CACNA1A-227ENST00000636549 DRICH1Q6PGQ1 229 aaPredicted RBP16.93■□□□□ 0.3
CACNA1A-227ENST00000636549 KLHDC8AQ8IYD2 350 aa16.93■□□□□ 0.3
CACNA1A-227ENST00000636549 BOCQ9BWV1 1114 aa16.93■□□□□ 0.3
CACNA1A-227ENST00000636549 USP32Q8NFA0 1604 aa16.93■□□□□ 0.3
CACNA1A-227ENST00000636549 PIP5K1CO60331 668 aa16.93■□□□□ 0.3
CACNA1A-227ENST00000636549 ANXA7P20073 488 aaKnown RBP16.93■□□□□ 0.3
CACNA1A-227ENST00000636549 ALDH3B1P43353 468 aa16.93■□□□□ 0.3
CACNA1A-227ENST00000636549 GLO1Q04760 184 aa16.93■□□□□ 0.3
CACNA1A-227ENST00000636549 KLHDC10Q6PID8 442 aa16.93■□□□□ 0.3
CACNA1A-227ENST00000636549 OVCH1Q7RTY7 1134 aa16.93■□□□□ 0.3
CACNA1A-227ENST00000636549 ACKR4Q9NPB9 350 aa16.93■□□□□ 0.3
CACNA1A-227ENST00000636549 SALL3Q9BXA9 1300 aa16.92■□□□□ 0.3
CACNA1A-227ENST00000636549 E9PI62 339 aa16.92■□□□□ 0.3
CACNA1A-227ENST00000636549 TNFRSF8P28908 595 aa16.92■□□□□ 0.3
CACNA1A-227ENST00000636549 FAM189BP81408 668 aa16.92■□□□□ 0.3
CACNA1A-227ENST00000636549 TP53I3Q53FA7 332 aa16.92■□□□□ 0.3
CACNA1A-227ENST00000636549 CLECL1Q8IZS7 167 aa16.92■□□□□ 0.3
CACNA1A-227ENST00000636549 SIT1Q9Y3P8 196 aa16.92■□□□□ 0.3
CACNA1A-227ENST00000636549 A6NIN4 97 aa16.92■□□□□ 0.3
CACNA1A-227ENST00000636549 SSX4O60224 188 aa16.92■□□□□ 0.3
CACNA1A-227ENST00000636549 GPR143P51810 404 aa16.92■□□□□ 0.3
CACNA1A-227ENST00000636549 ZNF687Q8N1G0 1237 aa16.92■□□□□ 0.3
CACNA1A-227ENST00000636549 HSPB11Q9Y547 144 aa16.92■□□□□ 0.3
CACNA1A-227ENST00000636549 HSBP1L1C9JCN9 74 aa16.92■□□□□ 0.3
CACNA1A-227ENST00000636549 TSPAN15O95858 294 aa16.92■□□□□ 0.3
CACNA1A-227ENST00000636549 AMY2AP04746 511 aa16.92■□□□□ 0.3
CACNA1A-227ENST00000636549 PFKMP08237 780 aa16.92■□□□□ 0.3
CACNA1A-227ENST00000636549 COL9A3Q14050 684 aaPredicted RBP16.92■□□□□ 0.3
CACNA1A-227ENST00000636549 AKR1C8PQ5T2L2 129 aa16.92■□□□□ 0.3
CACNA1A-227ENST00000636549 GINS3Q9BRX5 216 aa16.92■□□□□ 0.3
CACNA1A-227ENST00000636549 A6NHS1 94 aa16.92■□□□□ 0.3
CACNA1A-227ENST00000636549 GYPBP06028 91 aa16.92■□□□□ 0.3
CACNA1A-227ENST00000636549 UPP1Q16831 310 aa16.92■□□□□ 0.3
CACNA1A-227ENST00000636549 SNIP1Q8TAD8 396 aaKnown RBP16.92■□□□□ 0.3
CACNA1A-227ENST00000636549 C8orf33Q9H7E9 229 aaPredicted RBP16.92■□□□□ 0.3
CACNA1A-227ENST00000636549 LRIT1Q9P2V4 623 aa16.92■□□□□ 0.3
CACNA1A-227ENST00000636549 NSG1A0A0A6YYJ2 146 aa16.92■□□□□ 0.3
CACNA1A-227ENST00000636549 JAM2P57087 298 aa16.92■□□□□ 0.3
CACNA1A-227ENST00000636549 ACY1Q03154 408 aa16.92■□□□□ 0.3
CACNA1A-227ENST00000636549 LRIG1Q96JA1 1093 aa16.92■□□□□ 0.3
CACNA1A-227ENST00000636549 DCLRE1CQ96SD1 692 aaKnown RBP16.92■□□□□ 0.3
CACNA1A-227ENST00000636549 KLHL13Q9P2N7 655 aa16.92■□□□□ 0.3
CACNA1A-227ENST00000636549 CSNK1EP49674 416 aaKnown RBP16.91■□□□□ 0.3
CACNA1A-227ENST00000636549 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.91■□□□□ 0.3
CACNA1A-227ENST00000636549 CST9LP1Q5W188 147 aa16.91■□□□□ 0.3
CACNA1A-227ENST00000636549 PINK1Q9BXM7 581 aa16.91■□□□□ 0.3
CACNA1A-227ENST00000636549 TMEM184CQ9NVA4 438 aa16.91■□□□□ 0.3
CACNA1A-227ENST00000636549 TMEM248Q9NWD8 314 aa16.91■□□□□ 0.3
CACNA1A-227ENST00000636549 CDH10Q9Y6N8 788 aa16.91■□□□□ 0.3
CACNA1A-227ENST00000636549 IQGAP1P46940 1657 aa16.91■□□□□ 0.3
CACNA1A-227ENST00000636549 RPS18P62269 152 aaKnown RBP16.91■□□□□ 0.3
CACNA1A-227ENST00000636549 PLD6Q8N2A8 252 aaKnown RBP16.91■□□□□ 0.3
CACNA1A-227ENST00000636549 C4orf32Q8N8J7 132 aa16.91■□□□□ 0.3
CACNA1A-227ENST00000636549 HUS1BQ8NHY5 278 aa16.91■□□□□ 0.3
CACNA1A-227ENST00000636549 ST7LQ8TDW4 575 aa16.91■□□□□ 0.3
CACNA1A-227ENST00000636549 ITFG2Q969R8 447 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms