RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 TRPC4Q9UBN4 977 aa13.92□□□□□ -0.18
CACNA1A-220ENST00000635988 PRAMEF27A3QJZ7 478 aa13.91□□□□□ -0.18
CACNA1A-220ENST00000635988 LANCL1O43813 399 aa13.91□□□□□ -0.18
CACNA1A-220ENST00000635988 FGBP02675 491 aa13.91□□□□□ -0.18
CACNA1A-220ENST00000635988 TCRBP04435 133 aa13.91□□□□□ -0.18
CACNA1A-220ENST00000635988 CKMP06732 381 aa13.91□□□□□ -0.18
CACNA1A-220ENST00000635988 F8A1P23610 371 aa13.91□□□□□ -0.18
CACNA1A-220ENST00000635988 BTCP35070 178 aa13.91□□□□□ -0.18
CACNA1A-220ENST00000635988 KHKP50053 298 aa13.91□□□□□ -0.18
CACNA1A-220ENST00000635988 BAMBIQ13145 260 aa13.91□□□□□ -0.18
CACNA1A-220ENST00000635988 TRAM2Q15035 370 aa13.91□□□□□ -0.18
CACNA1A-220ENST00000635988 ZNF791Q3KP31 576 aaPredicted RBP13.91□□□□□ -0.18
CACNA1A-220ENST00000635988 CDC73Q6P1J9 531 aa13.91□□□□□ -0.18
CACNA1A-220ENST00000635988 LCTLQ6UWM7 567 aa13.91□□□□□ -0.18
CACNA1A-220ENST00000635988 KLBQ86Z14 1044 aa13.91□□□□□ -0.18
CACNA1A-220ENST00000635988 CFAP206Q8IYR0 622 aa13.91□□□□□ -0.18
CACNA1A-220ENST00000635988 CMTM8Q8IZV2 173 aa13.91□□□□□ -0.18
CACNA1A-220ENST00000635988 SUN3Q8TAQ9 357 aa13.91□□□□□ -0.18
CACNA1A-220ENST00000635988 PINK1Q9BXM7 581 aa13.91□□□□□ -0.18
CACNA1A-220ENST00000635988 RHBGQ9H310 441 aa13.91□□□□□ -0.18
CACNA1A-220ENST00000635988 ANKRD19PQ9H560 264 aa13.91□□□□□ -0.18
CACNA1A-220ENST00000635988 ZNF334Q9HCZ1 680 aaPredicted RBP13.91□□□□□ -0.18
CACNA1A-220ENST00000635988 SLCO1C1Q9NYB5 712 aa13.91□□□□□ -0.18
CACNA1A-220ENST00000635988 PLXNA2O75051 1894 aa13.91□□□□□ -0.18
CACNA1A-220ENST00000635988 TRAV6A0A075B6T7 132 aa13.91□□□□□ -0.18
CACNA1A-220ENST00000635988 SURF4O15260 269 aa13.91□□□□□ -0.18
CACNA1A-220ENST00000635988 RNF13O43567 381 aa13.91□□□□□ -0.18
CACNA1A-220ENST00000635988 BSGP35613 385 aa13.91□□□□□ -0.18
CACNA1A-220ENST00000635988 STAT5AP42229 794 aa13.91□□□□□ -0.18
CACNA1A-220ENST00000635988 TAS2R41P59536 307 aa13.91□□□□□ -0.18
CACNA1A-220ENST00000635988 LSM11P83369 360 aaKnown RBP eCLIP13.91□□□□□ -0.18
CACNA1A-220ENST00000635988 ZNF658BQ4V348 819 aaPredicted RBP13.91□□□□□ -0.18
CACNA1A-220ENST00000635988 VASNQ6EMK4 673 aa13.91□□□□□ -0.18
CACNA1A-220ENST00000635988 KRT74Q7RTS7 529 aa13.91□□□□□ -0.18
CACNA1A-220ENST00000635988 TECPR1Q7Z6L1 1165 aa13.91□□□□□ -0.18
CACNA1A-220ENST00000635988 TPRA1Q86W33 373 aa13.91□□□□□ -0.18
CACNA1A-220ENST00000635988 FAM129CQ86XR2 697 aa13.91□□□□□ -0.18
CACNA1A-220ENST00000635988 ZNF366Q8N895 744 aa13.91□□□□□ -0.18
CACNA1A-220ENST00000635988 OR2A12Q8NGT7 310 aa13.91□□□□□ -0.18
CACNA1A-220ENST00000635988 PIGXQ8TBF5 258 aa13.91□□□□□ -0.18
CACNA1A-220ENST00000635988 ADAMTS14Q8WXS8 1223 aa13.91□□□□□ -0.18
CACNA1A-220ENST00000635988 MRPS31Q92665 395 aaKnown RBP13.91□□□□□ -0.18
CACNA1A-220ENST00000635988 EXOSC8Q96B26 276 aaKnown RBP13.91□□□□□ -0.18
CACNA1A-220ENST00000635988 ZSWIM3Q96MP5 696 aa13.91□□□□□ -0.18
CACNA1A-220ENST00000635988 MRPL17Q9NRX2 175 aaKnown RBP13.91□□□□□ -0.18
CACNA1A-220ENST00000635988 TNFRSF10DQ9UBN6 386 aa13.91□□□□□ -0.18
CACNA1A-220ENST00000635988 PRKAG2Q9UGJ0 569 aa13.91□□□□□ -0.18
CACNA1A-220ENST00000635988 ZFR2Q9UPR6 939 aaKnown RBP13.91□□□□□ -0.18
CACNA1A-220ENST00000635988 FKBP7Q9Y680 259 aa13.91□□□□□ -0.18
CACNA1A-220ENST00000635988 EEF1E1O43324 174 aaKnown RBP13.9□□□□□ -0.18
CACNA1A-220ENST00000635988 SELPP16109 830 aa13.9□□□□□ -0.18
CACNA1A-220ENST00000635988 CD53P19397 219 aa13.9□□□□□ -0.18
CACNA1A-220ENST00000635988 XPAP23025 273 aaPredicted RBP13.9□□□□□ -0.18
CACNA1A-220ENST00000635988 HOXD10P28358 340 aa13.9□□□□□ -0.18
CACNA1A-220ENST00000635988 BUD31P41223 144 aaPredicted RBP13.9□□□□□ -0.18
CACNA1A-220ENST00000635988 SLC7A9P82251 487 aa13.9□□□□□ -0.18
CACNA1A-220ENST00000635988 FGFBP1Q14512 234 aa13.9□□□□□ -0.18
CACNA1A-220ENST00000635988 INSL4Q14641 139 aa13.9□□□□□ -0.18
CACNA1A-220ENST00000635988 AANATQ16613 207 aa13.9□□□□□ -0.18
CACNA1A-220ENST00000635988 KIAA1161Q6NSJ0 714 aa13.9□□□□□ -0.18
CACNA1A-220ENST00000635988 SAMD12Q8N8I0 201 aa13.9□□□□□ -0.18
CACNA1A-220ENST00000635988 OR11H4Q8NGC9 324 aa13.9□□□□□ -0.18
CACNA1A-220ENST00000635988 OR8K5Q8NH50 307 aa13.9□□□□□ -0.18
CACNA1A-220ENST00000635988 C7orf50Q9BRJ6 194 aaKnown RBP13.9□□□□□ -0.18
CACNA1A-220ENST00000635988 ZCCHC2Q9C0B9 1178 aaKnown RBP13.9□□□□□ -0.18
CACNA1A-220ENST00000635988 IL21Q9HBE4 155 aa13.9□□□□□ -0.18
CACNA1A-220ENST00000635988 UCKL1Q9NWZ5 548 aa13.9□□□□□ -0.18
CACNA1A-220ENST00000635988 A0A0G2JPF8 293 aa13.9□□□□□ -0.18
CACNA1A-220ENST00000635988 RPS10-NUDT3A0A1W2PQS6 291 aa13.9□□□□□ -0.18
CACNA1A-220ENST00000635988 TUBAL3A6NHL2 446 aa13.9□□□□□ -0.18
CACNA1A-220ENST00000635988 HNRNPCL2B2RXH8 293 aa13.9□□□□□ -0.18
CACNA1A-220ENST00000635988 HNRNPCL3B7ZW38 293 aa13.9□□□□□ -0.18
CACNA1A-220ENST00000635988 SYT5O00445 386 aa13.9□□□□□ -0.18
CACNA1A-220ENST00000635988 HMGN1P05114 100 aa13.9□□□□□ -0.18
CACNA1A-220ENST00000635988 EIF4EP06730 217 aaKnown RBP13.9□□□□□ -0.18
CACNA1A-220ENST00000635988 HNRNPCL4P0DMR1 293 aa13.9□□□□□ -0.18
CACNA1A-220ENST00000635988 MMP12P39900 470 aa13.9□□□□□ -0.18
CACNA1A-220ENST00000635988 ST3GAL3Q11203 375 aa13.9□□□□□ -0.18
CACNA1A-220ENST00000635988 RPA4Q13156 261 aa13.9□□□□□ -0.18
CACNA1A-220ENST00000635988 TRAM1Q15629 374 aa13.9□□□□□ -0.18
CACNA1A-220ENST00000635988 CLEC12AQ5QGZ9 265 aa13.9□□□□□ -0.18
CACNA1A-220ENST00000635988 SMARCD3Q6STE5 483 aa13.9□□□□□ -0.18
CACNA1A-220ENST00000635988 SZRD1Q7Z422 152 aa13.9□□□□□ -0.18
CACNA1A-220ENST00000635988 FGD2Q7Z6J4 655 aa13.9□□□□□ -0.18
CACNA1A-220ENST00000635988 GPR135Q8IZ08 494 aa13.9□□□□□ -0.18
CACNA1A-220ENST00000635988 NXPE2Q96DL1 559 aa13.9□□□□□ -0.18
CACNA1A-220ENST00000635988 MSANTD3Q96H12 275 aa13.9□□□□□ -0.18
CACNA1A-220ENST00000635988 MS4A8Q9BY19 250 aa13.9□□□□□ -0.18
CACNA1A-220ENST00000635988 ACTR6Q9GZN1 396 aa13.9□□□□□ -0.18
CACNA1A-220ENST00000635988 ABCG4Q9H172 646 aa13.9□□□□□ -0.18
CACNA1A-220ENST00000635988 SPG21Q9NZD8 308 aa13.9□□□□□ -0.18
CACNA1A-220ENST00000635988 SLC13A4Q9UKG4 626 aa13.9□□□□□ -0.18
CACNA1A-220ENST00000635988 KIF26AQ9ULI4 1882 aaPredicted RBP13.9□□□□□ -0.18
CACNA1A-220ENST00000635988 MEIKINA0A087WXM9 373 aa13.89□□□□□ -0.19
CACNA1A-220ENST00000635988 TSPAN11A1L157 253 aa13.89□□□□□ -0.19
CACNA1A-220ENST00000635988 HRO43593 1189 aa13.89□□□□□ -0.19
CACNA1A-220ENST00000635988 EPPINO95925 133 aa13.89□□□□□ -0.19
CACNA1A-220ENST00000635988 RRASP10301 218 aa13.89□□□□□ -0.19
CACNA1A-220ENST00000635988 CTRB1P17538 263 aa13.89□□□□□ -0.19
CACNA1A-220ENST00000635988 FLT3LGP49771 235 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms