RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 C11orf24Q96F05 449 aaPredicted RBP14.54□□□□□ -0.08
CLN8-209ENST00000635970 DPH2Q9BQC3 489 aaPredicted RBP14.54□□□□□ -0.08
CLN8-209ENST00000635970 MS4A12Q9NXJ0 267 aa14.54□□□□□ -0.08
CLN8-209ENST00000635970 SPHK1Q9NYA1 384 aa14.54□□□□□ -0.08
CLN8-209ENST00000635970 A0A1W2PNU3 283 aaPredicted RBP14.53□□□□□ -0.08
CLN8-209ENST00000635970 GSAPA4D1B5 854 aa14.53□□□□□ -0.08
CLN8-209ENST00000635970 GFYI3L273 518 aa14.53□□□□□ -0.08
CLN8-209ENST00000635970 CATP04040 527 aaKnown RBP14.53□□□□□ -0.08
CLN8-209ENST00000635970 SCG5P05408 212 aa14.53□□□□□ -0.08
CLN8-209ENST00000635970 PEBP1P30086 187 aaKnown RBP14.53□□□□□ -0.08
CLN8-209ENST00000635970 TNFSF8P32971 234 aa14.53□□□□□ -0.08
CLN8-209ENST00000635970 RAB28P51157 221 aa14.53□□□□□ -0.08
CLN8-209ENST00000635970 RORCP51449 518 aa14.53□□□□□ -0.08
CLN8-209ENST00000635970 MRPS15P82914 257 aaKnown RBP14.53□□□□□ -0.08
CLN8-209ENST00000635970 ACSM2AQ08AH3 577 aa14.53□□□□□ -0.08
CLN8-209ENST00000635970 ARMC4Q5T2S8 1044 aa14.53□□□□□ -0.08
CLN8-209ENST00000635970 MEDAGQ5VYS4 303 aa14.53□□□□□ -0.08
CLN8-209ENST00000635970 RNLSQ5VYX0 342 aa14.53□□□□□ -0.08
CLN8-209ENST00000635970 ACSM2BQ68CK6 577 aa14.53□□□□□ -0.08
CLN8-209ENST00000635970 PLAG1Q6DJT9 500 aa14.53□□□□□ -0.08
CLN8-209ENST00000635970 GALNT10Q86SR1 603 aa14.53□□□□□ -0.08
CLN8-209ENST00000635970 NLGN4XQ8N0W4 816 aa14.53□□□□□ -0.08
CLN8-209ENST00000635970 LGI4Q8N135 537 aa14.53□□□□□ -0.08
CLN8-209ENST00000635970 GOT1L1Q8NHS2 421 aaPredicted RBP14.53□□□□□ -0.08
CLN8-209ENST00000635970 UTP15Q8TED0 518 aaKnown RBP14.53□□□□□ -0.08
CLN8-209ENST00000635970 RAD51AP1Q96B01 352 aa14.53□□□□□ -0.08
CLN8-209ENST00000635970 SMURF1Q9HCE7 757 aa14.53□□□□□ -0.08
CLN8-209ENST00000635970 AMBNQ9NP70 447 aa14.53□□□□□ -0.08
CLN8-209ENST00000635970 DDX28Q9NUL7 540 aaKnown RBP14.53□□□□□ -0.08
CLN8-209ENST00000635970 TMEM229AB2RXF0 380 aa14.53□□□□□ -0.08
CLN8-209ENST00000635970 MFN2O95140 757 aa14.53□□□□□ -0.08
CLN8-209ENST00000635970 HSMCR30P0CW71 290 aa14.53□□□□□ -0.08
CLN8-209ENST00000635970 CCKBRP32239 447 aa14.53□□□□□ -0.08
CLN8-209ENST00000635970 SPIBQ01892 262 aa14.53□□□□□ -0.08
CLN8-209ENST00000635970 CHRNEQ04844 493 aa14.53□□□□□ -0.08
CLN8-209ENST00000635970 CHIT1Q13231 466 aa14.53□□□□□ -0.08
CLN8-209ENST00000635970 MED22Q15528 200 aa14.53□□□□□ -0.08
CLN8-209ENST00000635970 TSEN54Q7Z6J9 526 aaKnown RBP14.53□□□□□ -0.08
CLN8-209ENST00000635970 PLXDC1Q8IUK5 500 aa14.53□□□□□ -0.08
CLN8-209ENST00000635970 SLC30A8Q8IWU4 369 aa14.53□□□□□ -0.08
CLN8-209ENST00000635970 CLECL1Q8IZS7 167 aa14.53□□□□□ -0.08
CLN8-209ENST00000635970 OR8H2Q8N162 312 aa14.53□□□□□ -0.08
CLN8-209ENST00000635970 WDR20Q8TBZ3 569 aa14.53□□□□□ -0.08
CLN8-209ENST00000635970 GEMIN6Q8WXD5 167 aaKnown RBP14.53□□□□□ -0.08
CLN8-209ENST00000635970 PKP4Q99569 1192 aa14.53□□□□□ -0.08
CLN8-209ENST00000635970 TMEM38AQ9H6F2 299 aa14.53□□□□□ -0.08
CLN8-209ENST00000635970 SEC14L4Q9UDX3 406 aa14.53□□□□□ -0.08
CLN8-209ENST00000635970 TBC1D24Q9ULP9 559 aa14.53□□□□□ -0.08
CLN8-209ENST00000635970 KNTC1P50748 2209 aa14.52□□□□□ -0.09
CLN8-209ENST00000635970 FAM221BA6H8Z2 402 aa14.52□□□□□ -0.09
CLN8-209ENST00000635970 H0YIV9 168 aa14.52□□□□□ -0.09
CLN8-209ENST00000635970 CHRM5P08912 532 aaPredicted RBP14.52□□□□□ -0.09
CLN8-209ENST00000635970 LAMP1P11279 417 aa14.52□□□□□ -0.09
CLN8-209ENST00000635970 MAGP20916 626 aa14.52□□□□□ -0.09
CLN8-209ENST00000635970 IRF8Q02556 426 aa14.52□□□□□ -0.09
CLN8-209ENST00000635970 RUNX1T1Q06455 604 aa14.52□□□□□ -0.09
CLN8-209ENST00000635970 TSTQ16762 297 aaKnown RBP14.52□□□□□ -0.09
CLN8-209ENST00000635970 C3orf38Q5JPI3 329 aa14.52□□□□□ -0.09
CLN8-209ENST00000635970 TMPRSS11AQ6ZMR5 421 aa14.52□□□□□ -0.09
CLN8-209ENST00000635970 Q6ZPB1 254 aaPredicted RBP14.52□□□□□ -0.09
CLN8-209ENST00000635970 OR9A1PQ8NGU1 263 aa14.52□□□□□ -0.09
CLN8-209ENST00000635970 ST6GAL2Q96JF0 529 aa14.52□□□□□ -0.09
CLN8-209ENST00000635970 MAP3K3Q99759 626 aa14.52□□□□□ -0.09
CLN8-209ENST00000635970 BHLHE41Q9C0J9 482 aaPredicted RBP14.52□□□□□ -0.09
CLN8-209ENST00000635970 RAB33BQ9H082 229 aa14.52□□□□□ -0.09
CLN8-209ENST00000635970 MARCH7Q9H992 704 aa14.52□□□□□ -0.09
CLN8-209ENST00000635970 SLC22A14Q9Y267 594 aa14.52□□□□□ -0.09
CLN8-209ENST00000635970 CAB39Q9Y376 341 aaPredicted RBP14.52□□□□□ -0.09
CLN8-209ENST00000635970 CEP295Q9C0D2 2601 aa14.52□□□□□ -0.09
CLN8-209ENST00000635970 PCM1Q15154 2024 aa14.52□□□□□ -0.09
CLN8-209ENST00000635970 IQCMA0A1B0GVH7 501 aa14.51□□□□□ -0.09
CLN8-209ENST00000635970 PIPSLA2A3N6 862 aa14.51□□□□□ -0.09
CLN8-209ENST00000635970 ZAR1LA6NP61 321 aa14.51□□□□□ -0.09
CLN8-209ENST00000635970 CTDSP2O14595 271 aa14.51□□□□□ -0.09
CLN8-209ENST00000635970 CCNB2O95067 398 aa14.51□□□□□ -0.09
CLN8-209ENST00000635970 ALX3O95076 343 aa14.51□□□□□ -0.09
CLN8-209ENST00000635970 SLC16A8O95907 504 aa14.51□□□□□ -0.09
CLN8-209ENST00000635970 YES1P07947 543 aa14.51□□□□□ -0.09
CLN8-209ENST00000635970 CXCR2P25025 360 aa14.51□□□□□ -0.09
CLN8-209ENST00000635970 PSMA1P25786 263 aaKnown RBP14.51□□□□□ -0.09
CLN8-209ENST00000635970 LIMS1P48059 325 aa14.51□□□□□ -0.09
CLN8-209ENST00000635970 NUDT6P53370 316 aa14.51□□□□□ -0.09
CLN8-209ENST00000635970 SCN1BQ07699 218 aa14.51□□□□□ -0.09
CLN8-209ENST00000635970 CAMK2BQ13554 666 aa14.51□□□□□ -0.09
CLN8-209ENST00000635970 ZXDCQ2QGD7 858 aaPredicted RBP14.51□□□□□ -0.09
CLN8-209ENST00000635970 SPIN4Q56A73 249 aa14.51□□□□□ -0.09
CLN8-209ENST00000635970 CRB2Q5IJ48 1285 aa14.51□□□□□ -0.09
CLN8-209ENST00000635970 ARMC6Q6NXE6 501 aa14.51□□□□□ -0.09
CLN8-209ENST00000635970 NRARPQ7Z6K4 114 aa14.51□□□□□ -0.09
CLN8-209ENST00000635970 FAM20CQ8IXL6 584 aa14.51□□□□□ -0.09
CLN8-209ENST00000635970 PIP5K1AQ99755 562 aa14.51□□□□□ -0.09
CLN8-209ENST00000635970 DPYSL5Q9BPU6 564 aa14.51□□□□□ -0.09
CLN8-209ENST00000635970 ASPNQ9BXN1 380 aa14.51□□□□□ -0.09
CLN8-209ENST00000635970 EBPLQ9BY08 206 aa14.51□□□□□ -0.09
CLN8-209ENST00000635970 RNF167Q9H6Y7 350 aa14.51□□□□□ -0.09
CLN8-209ENST00000635970 ACTR10Q9NZ32 417 aa14.51□□□□□ -0.09
CLN8-209ENST00000635970 OR6C2Q9NZP2 312 aa14.51□□□□□ -0.09
CLN8-209ENST00000635970 EPHA6Q9UF33 1036 aa14.51□□□□□ -0.09
CLN8-209ENST00000635970 POMT2Q9UKY4 750 aa14.51□□□□□ -0.09
CLN8-209ENST00000635970 SATB2Q9UPW6 733 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms