RNA–Protein interactions for RNA: ENST00000635682.1

HSPG2-214, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 921 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-214ENST00000635682 MOAP1Q96BY2 351 aa13.59□□□□□ -0.23
HSPG2-214ENST00000635682 ZNF597Q96LX8 424 aa13.59□□□□□ -0.23
HSPG2-214ENST00000635682 COL21A1Q96P44 957 aa13.59□□□□□ -0.23
HSPG2-214ENST00000635682 MS4A4EQ96PG1 132 aa13.59□□□□□ -0.23
HSPG2-214ENST00000635682 BTBD9Q96Q07 612 aa13.59□□□□□ -0.23
HSPG2-214ENST00000635682 PHF12Q96QT6 1004 aa13.59□□□□□ -0.23
HSPG2-214ENST00000635682 LDAHQ9H6V9 325 aa13.59□□□□□ -0.23
HSPG2-214ENST00000635682 ANKRA2Q9H9E1 313 aa13.59□□□□□ -0.23
HSPG2-214ENST00000635682 IL1RL2Q9HB29 575 aa13.59□□□□□ -0.23
HSPG2-214ENST00000635682 CHST11Q9NPF2 352 aa13.59□□□□□ -0.23
HSPG2-214ENST00000635682 ZCCHC3Q9NUD5 404 aaKnown RBP13.59□□□□□ -0.23
HSPG2-214ENST00000635682 EXO1Q9UQ84 846 aaKnown RBP13.59□□□□□ -0.23
HSPG2-214ENST00000635682 DTX4Q9Y2E6 619 aa13.59□□□□□ -0.23
HSPG2-214ENST00000635682 USH1CQ9Y6N9 552 aa13.59□□□□□ -0.23
HSPG2-214ENST00000635682 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.59□□□□□ -0.23
HSPG2-214ENST00000635682 FAM166BA8MTA8 275 aa13.58□□□□□ -0.24
HSPG2-214ENST00000635682 C19orf84I3L1E1 186 aa13.58□□□□□ -0.24
HSPG2-214ENST00000635682 UPK1AO00322 258 aa13.58□□□□□ -0.24
HSPG2-214ENST00000635682 SDHDO14521 159 aa13.58□□□□□ -0.24
HSPG2-214ENST00000635682 SASH3O75995 380 aa13.58□□□□□ -0.24
HSPG2-214ENST00000635682 SNX4O95219 450 aa13.58□□□□□ -0.24
HSPG2-214ENST00000635682 LAMP1P11279 417 aa13.58□□□□□ -0.24
HSPG2-214ENST00000635682 IDO1P14902 403 aa13.58□□□□□ -0.24
HSPG2-214ENST00000635682 POU3F2P20265 443 aaPredicted RBP13.58□□□□□ -0.24
HSPG2-214ENST00000635682 EFNA1P20827 205 aaPredicted RBP13.58□□□□□ -0.24
HSPG2-214ENST00000635682 S100A3P33764 101 aa13.58□□□□□ -0.24
HSPG2-214ENST00000635682 GCKP35557 465 aa13.58□□□□□ -0.24
HSPG2-214ENST00000635682 PIGAP37287 484 aa13.58□□□□□ -0.24
HSPG2-214ENST00000635682 KIR3DL1P43629 444 aa13.58□□□□□ -0.24
HSPG2-214ENST00000635682 RFX3P48380 749 aa13.58□□□□□ -0.24
HSPG2-214ENST00000635682 DNASE1L1P49184 302 aa13.58□□□□□ -0.24
HSPG2-214ENST00000635682 SMSP52788 366 aa13.58□□□□□ -0.24
HSPG2-214ENST00000635682 DIO3P55073 304 aa13.58□□□□□ -0.24
HSPG2-214ENST00000635682 MLC1Q15049 377 aa13.58□□□□□ -0.24
HSPG2-214ENST00000635682 TOMM20Q15388 145 aa13.58□□□□□ -0.24
HSPG2-214ENST00000635682 CYP27C1Q4G0S4 372 aa13.58□□□□□ -0.24
HSPG2-214ENST00000635682 OGFOD2Q6N063 350 aa13.58□□□□□ -0.24
HSPG2-214ENST00000635682 C3P1Q6ZMU1 363 aa13.58□□□□□ -0.24
HSPG2-214ENST00000635682 LARP4Q71RC2 724 aaKnown RBP eCLIP13.58□□□□□ -0.24
HSPG2-214ENST00000635682 ZNF227Q86WZ6 799 aa13.58□□□□□ -0.24
HSPG2-214ENST00000635682 SIAH3Q8IW03 269 aa13.58□□□□□ -0.24
HSPG2-214ENST00000635682 KRTCAP2Q8N6L1 136 aa13.58□□□□□ -0.24
HSPG2-214ENST00000635682 CDRT4Q8N9R6 151 aa13.58□□□□□ -0.24
HSPG2-214ENST00000635682 ZFP62Q8NB50 900 aaPredicted RBP13.58□□□□□ -0.24
HSPG2-214ENST00000635682 OR56A1Q8NGH5 318 aa13.58□□□□□ -0.24
HSPG2-214ENST00000635682 SPPL2AQ8TCT8 520 aa13.58□□□□□ -0.24
HSPG2-214ENST00000635682 GPR151Q8TDV0 419 aa13.58□□□□□ -0.24
HSPG2-214ENST00000635682 SLC9A6Q92581 669 aa13.58□□□□□ -0.24
HSPG2-214ENST00000635682 TMBIM1Q969X1 311 aa13.58□□□□□ -0.24
HSPG2-214ENST00000635682 MAGEB18Q96M61 343 aa13.58□□□□□ -0.24
HSPG2-214ENST00000635682 WDR55Q9H6Y2 383 aaPredicted RBP13.58□□□□□ -0.24
HSPG2-214ENST00000635682 MED4Q9NPJ6 270 aa13.58□□□□□ -0.24
HSPG2-214ENST00000635682 FAF1Q9UNN5 650 aaPredicted RBP13.58□□□□□ -0.24
HSPG2-214ENST00000635682 GPR55Q9Y2T6 319 aaPredicted RBP13.58□□□□□ -0.24
HSPG2-214ENST00000635682 MEMO1Q9Y316 297 aa13.58□□□□□ -0.24
HSPG2-214ENST00000635682 CCDC168Q8NDH2 2452 aa13.58□□□□□ -0.24
HSPG2-214ENST00000635682 TO15178 435 aa13.57□□□□□ -0.24
HSPG2-214ENST00000635682 UBDO15205 165 aa13.57□□□□□ -0.24
HSPG2-214ENST00000635682 ZNF354AO60765 605 aaPredicted RBP13.57□□□□□ -0.24
HSPG2-214ENST00000635682 C6orf47O95873 294 aa13.57□□□□□ -0.24
HSPG2-214ENST00000635682 ALOX5P09917 674 aa13.57□□□□□ -0.24
HSPG2-214ENST00000635682 CDK9P50750 372 aaKnown RBP13.57□□□□□ -0.24
HSPG2-214ENST00000635682 NME5P56597 212 aa13.57□□□□□ -0.24
HSPG2-214ENST00000635682 CORO7P57737 925 aa13.57□□□□□ -0.24
HSPG2-214ENST00000635682 PRSS53Q2L4Q9 553 aa13.57□□□□□ -0.24
HSPG2-214ENST00000635682 Q6ZPB1 254 aaPredicted RBP13.57□□□□□ -0.24
HSPG2-214ENST00000635682 GDF7Q7Z4P5 450 aa13.57□□□□□ -0.24
HSPG2-214ENST00000635682 FAM109AQ8N4B1 249 aa13.57□□□□□ -0.24
HSPG2-214ENST00000635682 OR4A15Q8NGL6 344 aa13.57□□□□□ -0.24
HSPG2-214ENST00000635682 COQ8BQ96D53 544 aa13.57□□□□□ -0.24
HSPG2-214ENST00000635682 VSTM2LQ96N03 204 aa13.57□□□□□ -0.24
HSPG2-214ENST00000635682 RILPQ96NA2 401 aa13.57□□□□□ -0.24
HSPG2-214ENST00000635682 OSBPL11Q9BXB4 747 aa13.57□□□□□ -0.24
HSPG2-214ENST00000635682 TTTY12Q9BZ98 90 aa13.57□□□□□ -0.24
HSPG2-214ENST00000635682 CBLCQ9ULV8 474 aa13.57□□□□□ -0.24
HSPG2-214ENST00000635682 PCDHGB3Q9Y5G1 929 aa13.57□□□□□ -0.24
HSPG2-214ENST00000635682 CHCHD2Q9Y6H1 151 aaPredicted RBP13.57□□□□□ -0.24
HSPG2-214ENST00000635682 CSMD2Q7Z408 3487 aa13.56□□□□□ -0.24
HSPG2-214ENST00000635682 F8P00451 2351 aa13.56□□□□□ -0.24
HSPG2-214ENST00000635682 ANKRD33BA6NCL7 494 aa13.56□□□□□ -0.24
HSPG2-214ENST00000635682 PRAMEF25A6NGN4 478 aa13.56□□□□□ -0.24
HSPG2-214ENST00000635682 OR6C70A6NIJ9 312 aa13.56□□□□□ -0.24
HSPG2-214ENST00000635682 E9PBE3 544 aa13.56□□□□□ -0.24
HSPG2-214ENST00000635682 PRRG2O14669 202 aa13.56□□□□□ -0.24
HSPG2-214ENST00000635682 SOX30O94993 753 aa13.56□□□□□ -0.24
HSPG2-214ENST00000635682 TGDSO95455 350 aa13.56□□□□□ -0.24
HSPG2-214ENST00000635682 HPGDP15428 266 aa13.56□□□□□ -0.24
HSPG2-214ENST00000635682 GDF1P27539 372 aa13.56□□□□□ -0.24
HSPG2-214ENST00000635682 GABRA3P34903 492 aa13.56□□□□□ -0.24
HSPG2-214ENST00000635682 PTGER4P35408 488 aa13.56□□□□□ -0.24
HSPG2-214ENST00000635682 FRKP42685 505 aaPredicted RBP13.56□□□□□ -0.24
HSPG2-214ENST00000635682 CCT3P49368 545 aaKnown RBP13.56□□□□□ -0.24
HSPG2-214ENST00000635682 PNLIPRP2P54317 469 aa13.56□□□□□ -0.24
HSPG2-214ENST00000635682 C21orf58P58505 322 aa13.56□□□□□ -0.24
HSPG2-214ENST00000635682 LRRC74AQ0VAA2 488 aa13.56□□□□□ -0.24
HSPG2-214ENST00000635682 DUSP8Q13202 625 aa13.56□□□□□ -0.24
HSPG2-214ENST00000635682 SNTA1Q13424 505 aa13.56□□□□□ -0.24
HSPG2-214ENST00000635682 SLC10A1Q14973 349 aa13.56□□□□□ -0.24
HSPG2-214ENST00000635682 GSTA3Q16772 222 aa13.56□□□□□ -0.24
HSPG2-214ENST00000635682 OR4F3Q6IEY1 312 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms