RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 CCDC73Q6ZRK6 1079 aa2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 PRSS42Q7Z5A4 293 aa2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 UNC93AQ86WB7 457 aa2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 ERICH1Q86X53 443 aa2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 MARCH9Q86YJ5 346 aa2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 AQP12AQ8IXF9 295 aa2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 ZNF843Q8N446 348 aa2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 MAPKAPK5-AS1Q8N8E1 139 aa2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 C12orf29Q8N999 325 aa2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 LINC00301Q8NCQ3 95 aa2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 OR2T12Q8NG77 320 aa2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 OR1J1Q8NGS3 322 aa2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 OR52N5Q8NH56 324 aa2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 SLC2A14Q8TDB8 520 aa2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 LRRC8CQ8TDW0 803 aa2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 ST7LQ8TDW4 575 aa2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 ZNF473Q8WTR7 871 aaKnown RBP2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 SORCS1Q8WY21 1168 aa2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 FBXO32Q969P5 355 aa2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 SYAP1Q96A49 352 aaPredicted RBP2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 PYCR2Q96C36 320 aa2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 AP2M1Q96CW1 435 aa2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 SLC47A1Q96FL8 570 aa2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 CDKN2AIPNLQ96HQ2 116 aa2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 ANKRD36BP1Q96IX9 119 aa2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 PRICKLE1Q96MT3 831 aaPredicted RBP2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 MAP3K3Q99759 626 aa2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 C17orf62Q9BQA9 187 aa2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 TRIM7Q9C029 511 aa2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 LAT2Q9GZY6 243 aa2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 GFRA4Q9GZZ7 299 aa2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 CUEDC2Q9H467 287 aa2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 FBXO44Q9H4M3 255 aa2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 MAGEF1Q9HAY2 307 aa2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 LRRC4Q9HBW1 653 aa2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 ZBTB20Q9HC78 741 aaPredicted RBP2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 TM9SF3Q9HD45 589 aa2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 A4GALTQ9NPC4 353 aa2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 SDR39U1Q9NRG7 319 aaPredicted RBP2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 FGF21Q9NSA1 209 aa2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 PANK4Q9NVE7 773 aa2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 CGNQ9P2M7 1197 aaKnown RBP2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 DEC1Q9P2X7 70 aa2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 RUVBL2Q9Y230 463 aaKnown RBP2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 CHKBQ9Y259 395 aa2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 KIF3AQ9Y496 699 aa2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 U3KQA8 63 aa2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 LRRK1Q38SD2 2015 aa2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 ATP8B3O60423 1300 aa2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 NBASA2RRP1 2371 aa2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 SPTBN1Q01082 2364 aaKnown RBP2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 NIPBLQ6KC79 2804 aaeCLIP2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 SAA2-SAA4A0A096LPE2 208 aa2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 PVALEFA0A1B0GWK0 134 aa2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 C5orf51A6NDU8 294 aa2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 ANKRD61A6NGH8 418 aa2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 A8MXQ7 604 aa2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 C17orf105B2RV13 164 aa2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 TULP2O00295 520 aa2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 CACNB4O00305 520 aaPredicted RBP2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 CAPN9O14815 690 aa2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 LETM1O95202 739 aaPredicted RBP2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 SEMA4FO95754 770 aa2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 HLA-DRAP01903 254 aa2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 TNNC2P02585 160 aa2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 APOHP02749 345 aaPredicted RBP2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 PRB1P04280 392 aa2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 IGHV4-31P0DP07 118 aa2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 DLATP10515 647 aaKnown RBP2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 KRT3P12035 628 aa2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 MSH3P20585 1137 aa2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 EFNA1P20827 205 aaPredicted RBP2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 SYT1P21579 422 aa2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 CDH3P22223 829 aa2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 CA4P22748 312 aa2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 CA6P23280 308 aa2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 ANXA13P27216 316 aa2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 EPHA2P29317 976 aa2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 CASP1P29466 404 aa2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 CSTF2P33240 577 aaKnown RBP eCLIP2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 MATKP42679 507 aa2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 MAGEB1P43366 347 aa2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 NKX2-1P43699 371 aaPredicted RBP2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 NDST1P52848 882 aa2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 METAP1P53582 386 aa2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 AP3M2P53677 418 aa2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 RP1P56715 2156 aa2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 MAP3K7CLP57077 242 aa2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 RPS14P62263 151 aaKnown RBP2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 TNNC1P63316 161 aa2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 SLC34A1Q06495 639 aa2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 WASHC5Q12768 1159 aa2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 TRAP1Q12931 704 aaKnown RBP2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 PPA1Q15181 289 aa2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 UGP2Q16851 508 aa2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 KRTAP13-3Q3SY46 172 aa2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 PDLIM3Q53GG5 364 aaPredicted RBP2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 SLC35D3Q5M8T2 416 aa2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 DCAF10Q5QP82 559 aa2.21□□□□□ -2.06
SMARCB1-208ENST00000634926 PDSS1Q5T2R2 415 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms