RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 NEK10Q6ZWH5 1172 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 PLD3Q8IV08 490 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 CPNE9Q8IYJ1 553 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 OR4N4Q8N0Y3 316 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 BCL6BQ8N143 479 aaPredicted RBP4.52□□□□□ -1.69
LINC00550-201ENST00000629293 SVOPQ8N4V2 548 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 LINC01555Q8NAE3 123 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 OR5K2Q8NHB8 316 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 NR4A3Q92570 626 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 DGCR14Q96DF8 476 aaKnown RBP4.52□□□□□ -1.69
LINC00550-201ENST00000629293 TMEM41AQ96HV5 264 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 VPS50Q96JG6 964 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 SH3GL3Q99963 347 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 SEMA6AQ9H2E6 1030 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 GID8Q9NWU2 228 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 PTTG2Q9NZH5 202 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 SEC14L3Q9UDX4 400 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 TRMT6Q9UJA5 497 aaKnown RBP4.52□□□□□ -1.69
LINC00550-201ENST00000629293 TIMM22Q9Y584 194 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 SCN2AQ99250 2005 aa4.51□□□□□ -1.69
LINC00550-201ENST00000629293 MYOCOSA0A1B0GUC4 107 aa4.51□□□□□ -1.69
LINC00550-201ENST00000629293 DHRS12A0PJE2 317 aa4.51□□□□□ -1.69
LINC00550-201ENST00000629293 HYKKA2RU49 373 aa4.51□□□□□ -1.69
LINC00550-201ENST00000629293 FAM234BA2RU67 622 aa4.51□□□□□ -1.69
LINC00550-201ENST00000629293 IDSB3KWA1 339 aa4.51□□□□□ -1.69
LINC00550-201ENST00000629293 C9JVG2 144 aa4.51□□□□□ -1.69
LINC00550-201ENST00000629293 H3BNH8 94 aa4.51□□□□□ -1.69
LINC00550-201ENST00000629293 SOCS2O14508 198 aa4.51□□□□□ -1.69
LINC00550-201ENST00000629293 ANKRD28O15084 1053 aa4.51□□□□□ -1.69
LINC00550-201ENST00000629293 CTSVO60911 334 aa4.51□□□□□ -1.69
LINC00550-201ENST00000629293 TIPRLO75663 272 aa4.51□□□□□ -1.69
LINC00550-201ENST00000629293 GPIP06744 558 aa4.51□□□□□ -1.69
LINC00550-201ENST00000629293 HEXBP07686 556 aa4.51□□□□□ -1.69
LINC00550-201ENST00000629293 FBLP22087 321 aaKnown RBP4.51□□□□□ -1.69
LINC00550-201ENST00000629293 IL12AP29459 219 aa4.51□□□□□ -1.69
LINC00550-201ENST00000629293 ALDH3B2P48448 385 aa4.51□□□□□ -1.69
LINC00550-201ENST00000629293 GSK3BP49841 420 aa4.51□□□□□ -1.69
LINC00550-201ENST00000629293 EMP2P54851 167 aa4.51□□□□□ -1.69
LINC00550-201ENST00000629293 EEFSECP57772 596 aaKnown RBP4.51□□□□□ -1.69
LINC00550-201ENST00000629293 RPA4Q13156 261 aa4.51□□□□□ -1.69
LINC00550-201ENST00000629293 CAPRIN1Q14444 709 aaKnown RBP4.51□□□□□ -1.69
LINC00550-201ENST00000629293 KIR2DS3Q14952 304 aa4.51□□□□□ -1.69
LINC00550-201ENST00000629293 TGFBIQ15582 683 aa4.51□□□□□ -1.69
LINC00550-201ENST00000629293 ATP6AP1Q15904 470 aa4.51□□□□□ -1.69
LINC00550-201ENST00000629293 NRF1Q16656 503 aa4.51□□□□□ -1.69
LINC00550-201ENST00000629293 SYT16Q17RD7 645 aa4.51□□□□□ -1.69
LINC00550-201ENST00000629293 FAM214AQ32MH5 1076 aa4.51□□□□□ -1.69
LINC00550-201ENST00000629293 CYP27C1Q4G0S4 372 aa4.51□□□□□ -1.69
LINC00550-201ENST00000629293 PAGE3Q5JUK9 113 aa4.51□□□□□ -1.69
LINC00550-201ENST00000629293 ABHD17BQ5VST6 288 aa4.51□□□□□ -1.69
LINC00550-201ENST00000629293 PTRHD1Q6GMV3 140 aaKnown RBP4.51□□□□□ -1.69
LINC00550-201ENST00000629293 LIN54Q6MZP7 749 aa4.51□□□□□ -1.69
LINC00550-201ENST00000629293 SUSD1Q6UWL2 747 aa4.51□□□□□ -1.69
LINC00550-201ENST00000629293 SBSNQ6UWP8 590 aa4.51□□□□□ -1.69
LINC00550-201ENST00000629293 AMIGO2Q86SJ2 522 aa4.51□□□□□ -1.69
LINC00550-201ENST00000629293 GPSM1Q86YR5 675 aa4.51□□□□□ -1.69
LINC00550-201ENST00000629293 SLC34A3Q8N130 599 aa4.51□□□□□ -1.69
LINC00550-201ENST00000629293 DNAJC22Q8N4W6 341 aa4.51□□□□□ -1.69
LINC00550-201ENST00000629293 DPP10Q8N608 796 aa4.51□□□□□ -1.69
LINC00550-201ENST00000629293 PDPRQ8NCN5 879 aa4.51□□□□□ -1.69
LINC00550-201ENST00000629293 PHOSPHO1Q8TCT1 267 aa4.51□□□□□ -1.69
LINC00550-201ENST00000629293 EEF1AKMT1Q8WVE0 214 aa4.51□□□□□ -1.69
LINC00550-201ENST00000629293 TFAP2CQ92754 450 aa4.51□□□□□ -1.69
LINC00550-201ENST00000629293 MMABQ96EY8 250 aaPredicted RBP4.51□□□□□ -1.69
LINC00550-201ENST00000629293 CIB1Q99828 191 aa4.51□□□□□ -1.69
LINC00550-201ENST00000629293 ZNF304Q9HCX3 659 aa4.51□□□□□ -1.69
LINC00550-201ENST00000629293 ZNF282Q9UDV7 671 aaPredicted RBP4.51□□□□□ -1.69
LINC00550-201ENST00000629293 DHRS7Q9Y394 339 aa4.51□□□□□ -1.69
LINC00550-201ENST00000629293 SNX13Q9Y5W8 968 aa4.51□□□□□ -1.69
LINC00550-201ENST00000629293 RTTNQ86VV8 2226 aa4.51□□□□□ -1.69
LINC00550-201ENST00000629293 FN1P02751 2386 aaKnown RBP4.51□□□□□ -1.69
LINC00550-201ENST00000629293 TRAV17A0A0B4J275 112 aa4.51□□□□□ -1.69
LINC00550-201ENST00000629293 TRBV5-4A0A0C4DH59 114 aa4.51□□□□□ -1.69
LINC00550-201ENST00000629293 LOC100996750A0A140TA64 210 aa4.51□□□□□ -1.69
LINC00550-201ENST00000629293 PLOD2O00469 737 aa4.51□□□□□ -1.69
LINC00550-201ENST00000629293 OR7A17O14581 309 aa4.51□□□□□ -1.69
LINC00550-201ENST00000629293 DSCR3O14972 297 aa4.51□□□□□ -1.69
LINC00550-201ENST00000629293 PFDN6O15212 129 aa4.51□□□□□ -1.69
LINC00550-201ENST00000629293 ACOX3O15254 700 aa4.51□□□□□ -1.69
LINC00550-201ENST00000629293 RASAL1O95294 804 aa4.51□□□□□ -1.69
LINC00550-201ENST00000629293 CNOT4O95628 575 aaKnown RBP4.51□□□□□ -1.69
LINC00550-201ENST00000629293 WDPCPO95876 746 aa4.51□□□□□ -1.69
LINC00550-201ENST00000629293 NPPAP01160 153 aa4.51□□□□□ -1.69
LINC00550-201ENST00000629293 ETS2P15036 469 aa4.51□□□□□ -1.69
LINC00550-201ENST00000629293 FAHP16930 419 aa4.51□□□□□ -1.69
LINC00550-201ENST00000629293 ZNF23P17027 643 aa4.51□□□□□ -1.69
LINC00550-201ENST00000629293 CCR7P32248 378 aa4.51□□□□□ -1.69
LINC00550-201ENST00000629293 TSFMP43897 325 aaKnown RBP4.51□□□□□ -1.69
LINC00550-201ENST00000629293 SH3BGRP55822 239 aaPredicted RBP4.51□□□□□ -1.69
LINC00550-201ENST00000629293 UFM1P61960 85 aa4.51□□□□□ -1.69
LINC00550-201ENST00000629293 MAT1AQ00266 395 aaKnown RBP4.51□□□□□ -1.69
LINC00550-201ENST00000629293 TRAF3Q13114 568 aa4.51□□□□□ -1.69
LINC00550-201ENST00000629293 SLC5A12Q1EHB4 618 aa4.51□□□□□ -1.69
LINC00550-201ENST00000629293 CCSMST1Q4G0I0 132 aa4.51□□□□□ -1.69
LINC00550-201ENST00000629293 FBXO48Q5FWF7 155 aa4.51□□□□□ -1.69
LINC00550-201ENST00000629293 C6orf136Q5SQH8 315 aa4.51□□□□□ -1.69
LINC00550-201ENST00000629293 Q6ZSR9 355 aa4.51□□□□□ -1.69
LINC00550-201ENST00000629293 SIMC1Q8NDZ2 872 aa4.51□□□□□ -1.69
LINC00550-201ENST00000629293 OR52B6Q8NGF0 335 aa4.51□□□□□ -1.69
LINC00550-201ENST00000629293 LKAAEAR1Q8TD35 194 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms