RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 Q9N2J8 555 aa20.43■□□□□ 0.86
SF1-220ENST00000626028 ATAD3AQ9NVI7 634 aa20.43■□□□□ 0.86
SF1-220ENST00000626028 SH3BP4Q9P0V3 963 aa20.43■□□□□ 0.86
SF1-220ENST00000626028 BAIAP2L1Q9UHR4 511 aa20.43■□□□□ 0.86
SF1-220ENST00000626028 ADGRG4Q8IZF6 3080 aa20.43■□□□□ 0.86
SF1-220ENST00000626028 PEX11AO75192 247 aa20.42■□□□□ 0.86
SF1-220ENST00000626028 CBR3O75828 277 aa20.42■□□□□ 0.86
SF1-220ENST00000626028 ENDOUP21128 410 aaKnown RBP20.42■□□□□ 0.86
SF1-220ENST00000626028 COL8A1P27658 744 aa20.42■□□□□ 0.86
SF1-220ENST00000626028 CHRNB4P30926 498 aa20.42■□□□□ 0.86
SF1-220ENST00000626028 GPC1P35052 558 aa20.42■□□□□ 0.86
SF1-220ENST00000626028 PTGDSP41222 190 aa20.42■□□□□ 0.86
SF1-220ENST00000626028 PSMD4P55036 377 aaKnown RBP20.42■□□□□ 0.86
SF1-220ENST00000626028 MANFP55145 182 aaKnown RBP20.42■□□□□ 0.86
SF1-220ENST00000626028 DECR1Q16698 335 aa20.42■□□□□ 0.86
SF1-220ENST00000626028 VPS26BQ4G0F5 336 aa20.42■□□□□ 0.86
SF1-220ENST00000626028 HIST2H2BCQ6DN03 193 aa20.42■□□□□ 0.86
SF1-220ENST00000626028 ZCCHC12Q6PEW1 402 aa20.42■□□□□ 0.86
SF1-220ENST00000626028 LARP4Q71RC2 724 aaKnown RBP eCLIP20.42■□□□□ 0.86
SF1-220ENST00000626028 PM20D2Q8IYS1 436 aa20.42■□□□□ 0.86
SF1-220ENST00000626028 CA5BP1Q8WTZ4 195 aa20.42■□□□□ 0.86
SF1-220ENST00000626028 PKNOX2Q96KN3 472 aa20.42■□□□□ 0.86
SF1-220ENST00000626028 C3orf30Q96M34 536 aa20.42■□□□□ 0.86
SF1-220ENST00000626028 PRPF18Q99633 342 aaKnown RBP20.42■□□□□ 0.86
SF1-220ENST00000626028 HHATLQ9HCP6 504 aa20.42■□□□□ 0.86
SF1-220ENST00000626028 KCNK9Q9NPC2 374 aa20.42■□□□□ 0.86
SF1-220ENST00000626028 ASIC5Q9NY37 505 aa20.42■□□□□ 0.86
SF1-220ENST00000626028 SPRR3Q9UBC9 169 aa20.42■□□□□ 0.86
SF1-220ENST00000626028 ABCG2Q9UNQ0 655 aa20.42■□□□□ 0.86
SF1-220ENST00000626028 NOTCH2Q04721 2471 aa20.41■□□□□ 0.86
SF1-220ENST00000626028 SCAMP2O15127 329 aaKnown RBP20.41■□□□□ 0.86
SF1-220ENST00000626028 AKAP10O43572 662 aa20.41■□□□□ 0.86
SF1-220ENST00000626028 SKAP2O75563 359 aaPredicted RBP20.41■□□□□ 0.86
SF1-220ENST00000626028 PRPS1L1P21108 318 aa20.41■□□□□ 0.86
SF1-220ENST00000626028 C21orf58P58505 322 aa20.41■□□□□ 0.86
SF1-220ENST00000626028 HSPB3Q12988 150 aa20.41■□□□□ 0.86
SF1-220ENST00000626028 BEND6Q5SZJ8 279 aaPredicted RBP20.41■□□□□ 0.86
SF1-220ENST00000626028 ANGPTL8Q6UXH0 198 aa20.41■□□□□ 0.86
SF1-220ENST00000626028 B3GNT6Q6ZMB0 384 aa20.41■□□□□ 0.86
SF1-220ENST00000626028 ZNF551Q7Z340 670 aaPredicted RBP20.41■□□□□ 0.86
SF1-220ENST00000626028 MARVELD2Q8N4S9 558 aa20.41■□□□□ 0.86
SF1-220ENST00000626028 FNDC5Q8NAU1 212 aa20.41■□□□□ 0.86
SF1-220ENST00000626028 CIDECQ96AQ7 238 aaPredicted RBP20.41■□□□□ 0.86
SF1-220ENST00000626028 TUBGCP3Q96CW5 907 aa20.41■□□□□ 0.86
SF1-220ENST00000626028 CBLCQ9ULV8 474 aa20.41■□□□□ 0.86
SF1-220ENST00000626028 EIF3LQ9Y262 564 aaKnown RBP20.41■□□□□ 0.86
SF1-220ENST00000626028 MRPS18CQ9Y3D5 142 aaKnown RBP20.41■□□□□ 0.86
SF1-220ENST00000626028 WIF1Q9Y5W5 379 aa20.41■□□□□ 0.86
SF1-220ENST00000626028 AHRRA9YTQ3 701 aa20.4■□□□□ 0.86
SF1-220ENST00000626028 TRAPPC6AO75865 159 aa20.4■□□□□ 0.86
SF1-220ENST00000626028 SOX30O94993 753 aa20.4■□□□□ 0.86
SF1-220ENST00000626028 GCKP35557 465 aa20.4■□□□□ 0.86
SF1-220ENST00000626028 SLC1A6P48664 564 aa20.4■□□□□ 0.86
SF1-220ENST00000626028 RPL14P50914 215 aaKnown RBP20.4■□□□□ 0.86
SF1-220ENST00000626028 EMX2Q04743 252 aa20.4■□□□□ 0.86
SF1-220ENST00000626028 MPP2Q14168 576 aa20.4■□□□□ 0.86
SF1-220ENST00000626028 ZNF385BQ569K4 471 aa20.4■□□□□ 0.86
SF1-220ENST00000626028 CES4AQ5XG92 561 aa20.4■□□□□ 0.86
SF1-220ENST00000626028 ZNF585AQ6P3V2 769 aa20.4■□□□□ 0.86
SF1-220ENST00000626028 INTS1Q8N201 2190 aaKnown RBP20.4■□□□□ 0.86
SF1-220ENST00000626028 CDRT4Q8N9R6 151 aa20.4■□□□□ 0.86
SF1-220ENST00000626028 OR5M9Q8NGP3 310 aa20.4■□□□□ 0.86
SF1-220ENST00000626028 LILRB4Q8NHJ6 448 aa20.4■□□□□ 0.86
SF1-220ENST00000626028 SDCCAG3Q96C92 435 aa20.4■□□□□ 0.86
SF1-220ENST00000626028 TTYH2Q9BSA4 534 aa20.4■□□□□ 0.86
SF1-220ENST00000626028 SLC6A15Q9H2J7 730 aa20.4■□□□□ 0.86
SF1-220ENST00000626028 NOP53Q9NZM5 478 aaKnown RBP20.4■□□□□ 0.86
SF1-220ENST00000626028 PCNX3Q9H6A9 2034 aa20.39■□□□□ 0.86
SF1-220ENST00000626028 TEX15Q9BXT5 2789 aa20.39■□□□□ 0.85
SF1-220ENST00000626028 WDR91A4D1P6 747 aa20.39■□□□□ 0.85
SF1-220ENST00000626028 ITM2AO43736 263 aa20.39■□□□□ 0.85
SF1-220ENST00000626028 ACTL6AO96019 429 aa20.39■□□□□ 0.85
SF1-220ENST00000626028 MAP3K8P41279 467 aa20.39■□□□□ 0.85
SF1-220ENST00000626028 PRR5P85299 388 aa20.39■□□□□ 0.85
SF1-220ENST00000626028 CRYZQ08257 329 aaKnown RBP20.39■□□□□ 0.85
SF1-220ENST00000626028 STX3Q13277 289 aa20.39■□□□□ 0.85
SF1-220ENST00000626028 IL23RQ5VWK5 629 aa20.39■□□□□ 0.85
SF1-220ENST00000626028 ZNF787Q6DD87 383 aa20.39■□□□□ 0.85
SF1-220ENST00000626028 VASNQ6EMK4 673 aa20.39■□□□□ 0.85
SF1-220ENST00000626028 ANKRD26P1Q6NSI1 321 aa20.39■□□□□ 0.85
SF1-220ENST00000626028 PLCZ1Q86YW0 608 aa20.39■□□□□ 0.85
SF1-220ENST00000626028 ZNF781Q8N8C0 355 aa20.39■□□□□ 0.85
SF1-220ENST00000626028 WDSUB1Q8N9V3 476 aa20.39■□□□□ 0.85
SF1-220ENST00000626028 CLHC1Q8NHS4 586 aa20.39■□□□□ 0.85
SF1-220ENST00000626028 COQ8BQ96D53 544 aa20.39■□□□□ 0.85
SF1-220ENST00000626028 MS4A4EQ96PG1 132 aa20.39■□□□□ 0.85
SF1-220ENST00000626028 GALNT9Q9HCQ5 603 aa20.39■□□□□ 0.85
SF1-220ENST00000626028 SDHAF3Q9NRP4 125 aa20.39■□□□□ 0.85
SF1-220ENST00000626028 DOCK7Q96N67 2140 aa20.38■□□□□ 0.85
SF1-220ENST00000626028 C15orf38-AP3S2A0A0A6YYH1 394 aa20.38■□□□□ 0.85
SF1-220ENST00000626028 GNB5O14775 395 aa20.38■□□□□ 0.85
SF1-220ENST00000626028 IL33O95760 270 aa20.38■□□□□ 0.85
SF1-220ENST00000626028 LCN1P31025 176 aa20.38■□□□□ 0.85
SF1-220ENST00000626028 PMPCAQ10713 525 aa20.38■□□□□ 0.85
SF1-220ENST00000626028 GAB1Q13480 694 aa20.38■□□□□ 0.85
SF1-220ENST00000626028 C1orf185Q5T7R7 199 aa20.38■□□□□ 0.85
SF1-220ENST00000626028 CPTPQ5TA50 214 aa20.38■□□□□ 0.85
SF1-220ENST00000626028 HHATQ5VTY9 493 aa20.38■□□□□ 0.85
SF1-220ENST00000626028 CAMKMTQ7Z624 323 aa20.38■□□□□ 0.85
SF1-220ENST00000626028 OR4N2Q8NGD1 307 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms