RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 SLC10A1Q14973 349 aa8.51□□□□□ -1.05
HDAC9-229ENST00000622668 TTC23Q5W5X9 447 aa8.51□□□□□ -1.05
HDAC9-229ENST00000622668 ASB18Q6ZVZ8 466 aa8.51□□□□□ -1.05
HDAC9-229ENST00000622668 MARCH9Q86YJ5 346 aa8.51□□□□□ -1.05
HDAC9-229ENST00000622668 ZNF440Q8IYI8 595 aa8.51□□□□□ -1.05
HDAC9-229ENST00000622668 CT55Q8WUE5 264 aa8.51□□□□□ -1.05
HDAC9-229ENST00000622668 SARAFQ96BY9 339 aa8.51□□□□□ -1.05
HDAC9-229ENST00000622668 MS4A6EQ96DS6 147 aa8.51□□□□□ -1.05
HDAC9-229ENST00000622668 K7ESF4 209 aa8.5□□□□□ -1.05
HDAC9-229ENST00000622668 FRS3O43559 492 aa8.5□□□□□ -1.05
HDAC9-229ENST00000622668 RCBTB2O95199 551 aa8.5□□□□□ -1.05
HDAC9-229ENST00000622668 CRYABP02511 175 aaKnown RBP8.5□□□□□ -1.05
HDAC9-229ENST00000622668 ACVR2AP27037 513 aa8.5□□□□□ -1.05
HDAC9-229ENST00000622668 HSD11B1P28845 292 aa8.5□□□□□ -1.05
HDAC9-229ENST00000622668 UQCRC1P31930 480 aa8.5□□□□□ -1.05
HDAC9-229ENST00000622668 HSPA13P48723 471 aa8.5□□□□□ -1.05
HDAC9-229ENST00000622668 GSK3BP49841 420 aa8.5□□□□□ -1.05
HDAC9-229ENST00000622668 TRA2BP62995 288 aaKnown RBP8.5□□□□□ -1.05
HDAC9-229ENST00000622668 AIMP2Q13155 320 aaKnown RBP8.5□□□□□ -1.05
HDAC9-229ENST00000622668 KLHL26Q53HC5 615 aa8.5□□□□□ -1.05
HDAC9-229ENST00000622668 CYBRD1Q53TN4 286 aa8.5□□□□□ -1.05
HDAC9-229ENST00000622668 CES4AQ5XG92 561 aa8.5□□□□□ -1.05
HDAC9-229ENST00000622668 TMEM214Q6NUQ4 689 aaKnown RBP8.5□□□□□ -1.05
HDAC9-229ENST00000622668 YRDCQ86U90 279 aaKnown RBP8.5□□□□□ -1.05
HDAC9-229ENST00000622668 ADGRF3Q8IZF5 1079 aa8.5□□□□□ -1.05
HDAC9-229ENST00000622668 SLC22A18ASQ8N1D0 253 aa8.5□□□□□ -1.05
HDAC9-229ENST00000622668 MAL2Q969L2 176 aa8.5□□□□□ -1.05
HDAC9-229ENST00000622668 DDIT4LQ96D03 193 aa8.5□□□□□ -1.05
HDAC9-229ENST00000622668 FRMD6Q96NE9 622 aa8.5□□□□□ -1.05
HDAC9-229ENST00000622668 TRNT1Q96Q11 434 aaKnown RBP8.5□□□□□ -1.05
HDAC9-229ENST00000622668 DENND2DQ9H6A0 471 aaPredicted RBP8.5□□□□□ -1.05
HDAC9-229ENST00000622668 NGBQ9NPG2 151 aa8.5□□□□□ -1.05
HDAC9-229ENST00000622668 NKIRAS2Q9NYR9 191 aa8.5□□□□□ -1.05
HDAC9-229ENST00000622668 EMC9Q9Y3B6 208 aa8.5□□□□□ -1.05
HDAC9-229ENST00000622668 SLC22A7Q9Y694 548 aa8.5□□□□□ -1.05
HDAC9-229ENST00000622668 EFCAB9A8MZ26 197 aa8.5□□□□□ -1.05
HDAC9-229ENST00000622668 FOXE1O00358 373 aaPredicted RBP8.5□□□□□ -1.05
HDAC9-229ENST00000622668 TBX1O43435 398 aa8.5□□□□□ -1.05
HDAC9-229ENST00000622668 ERCC1P07992 297 aaPredicted RBP8.5□□□□□ -1.05
HDAC9-229ENST00000622668 TMPRSS7Q7RTY8 843 aa8.5□□□□□ -1.05
HDAC9-229ENST00000622668 FBXW8Q8N3Y1 598 aa8.5□□□□□ -1.05
HDAC9-229ENST00000622668 COX14Q96I36 57 aa8.5□□□□□ -1.05
HDAC9-229ENST00000622668 OR2A14Q96R47 310 aa8.5□□□□□ -1.05
HDAC9-229ENST00000622668 SH3GL2Q99962 352 aa8.5□□□□□ -1.05
HDAC9-229ENST00000622668 OSBPL11Q9BXB4 747 aa8.5□□□□□ -1.05
HDAC9-229ENST00000622668 FOLH1BQ9HBA9 442 aa8.5□□□□□ -1.05
HDAC9-229ENST00000622668 MYNNQ9NPC7 610 aa8.5□□□□□ -1.05
HDAC9-229ENST00000622668 FANCGO15287 622 aa8.5□□□□□ -1.05
HDAC9-229ENST00000622668 OR2J2O76002 312 aa8.5□□□□□ -1.05
HDAC9-229ENST00000622668 TACR1P25103 407 aa8.5□□□□□ -1.05
HDAC9-229ENST00000622668 TMPRSS3P57727 454 aa8.5□□□□□ -1.05
HDAC9-229ENST00000622668 PPIAP62937 165 aaKnown RBP8.5□□□□□ -1.05
HDAC9-229ENST00000622668 YBX1P67809 324 aaKnown RBP8.5□□□□□ -1.05
HDAC9-229ENST00000622668 DGCR6Q14129 220 aa8.5□□□□□ -1.05
HDAC9-229ENST00000622668 MPP2Q14168 576 aa8.5□□□□□ -1.05
HDAC9-229ENST00000622668 DCST2Q5T1A1 773 aa8.5□□□□□ -1.05
HDAC9-229ENST00000622668 MMP21Q8N119 569 aa8.5□□□□□ -1.05
HDAC9-229ENST00000622668 DNAJC9Q8WXX5 260 aa8.5□□□□□ -1.05
HDAC9-229ENST00000622668 ZNF347Q96SE7 839 aa8.5□□□□□ -1.05
HDAC9-229ENST00000622668 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.5□□□□□ -1.05
HDAC9-229ENST00000622668 TPRKBQ9Y3C4 175 aa8.5□□□□□ -1.05
HDAC9-229ENST00000622668 PCDHGA1Q9Y5H4 931 aa8.5□□□□□ -1.05
HDAC9-229ENST00000622668 A6NLC8 198 aa8.49□□□□□ -1.05
HDAC9-229ENST00000622668 KLF11O14901 512 aa8.49□□□□□ -1.05
HDAC9-229ENST00000622668 PGRMC2O15173 223 aa8.49□□□□□ -1.05
HDAC9-229ENST00000622668 PROM1O43490 865 aa8.49□□□□□ -1.05
HDAC9-229ENST00000622668 MGRN1O60291 552 aa8.49□□□□□ -1.05
HDAC9-229ENST00000622668 CD79AP11912 226 aa8.49□□□□□ -1.05
HDAC9-229ENST00000622668 DNASE1L1P49184 302 aa8.49□□□□□ -1.05
HDAC9-229ENST00000622668 GPR143P51810 404 aa8.49□□□□□ -1.05
HDAC9-229ENST00000622668 EFNA3P52797 238 aa8.49□□□□□ -1.05
HDAC9-229ENST00000622668 TRAM2Q15035 370 aa8.49□□□□□ -1.05
HDAC9-229ENST00000622668 NPTX1Q15818 432 aa8.49□□□□□ -1.05
HDAC9-229ENST00000622668 GTDC1Q4AE62 458 aa8.49□□□□□ -1.05
HDAC9-229ENST00000622668 MTX3Q5HYI7 312 aa8.49□□□□□ -1.05
HDAC9-229ENST00000622668 KANK2Q63ZY3 851 aa8.49□□□□□ -1.05
HDAC9-229ENST00000622668 IZUMO2Q6UXV1 221 aa8.49□□□□□ -1.05
HDAC9-229ENST00000622668 MED25Q71SY5 747 aa8.49□□□□□ -1.05
HDAC9-229ENST00000622668 OR11G2Q8NGC1 345 aa8.49□□□□□ -1.05
HDAC9-229ENST00000622668 ZNF671Q8TAW3 534 aa8.49□□□□□ -1.05
HDAC9-229ENST00000622668 CHID1Q9BWS9 393 aa8.49□□□□□ -1.05
HDAC9-229ENST00000622668 FAM60AQ9NP50 221 aa8.49□□□□□ -1.05
HDAC9-229ENST00000622668 YARS2Q9Y2Z4 477 aaKnown RBP8.49□□□□□ -1.05
HDAC9-229ENST00000622668 NPFFR2Q9Y5X5 522 aa8.49□□□□□ -1.05
HDAC9-229ENST00000622668 ZNF236Q9UL36 1845 aa8.49□□□□□ -1.05
HDAC9-229ENST00000622668 A0A096LPI6 279 aa8.49□□□□□ -1.05
HDAC9-229ENST00000622668 PLPP1O14494 284 aa8.49□□□□□ -1.05
HDAC9-229ENST00000622668 SERPINA3P01011 423 aa8.49□□□□□ -1.05
HDAC9-229ENST00000622668 IGFBP5P24593 272 aa8.49□□□□□ -1.05
HDAC9-229ENST00000622668 VHLP40337 213 aa8.49□□□□□ -1.05
HDAC9-229ENST00000622668 CSNK2A1P68400 391 aaPredicted RBP8.49□□□□□ -1.05
HDAC9-229ENST00000622668 VLDLRP98155 873 aa8.49□□□□□ -1.05
HDAC9-229ENST00000622668 OR7A5Q15622 319 aa8.49□□□□□ -1.05
HDAC9-229ENST00000622668 TCTN3Q6NUS6 607 aa8.49□□□□□ -1.05
HDAC9-229ENST00000622668 GPR155Q7Z3F1 870 aa8.49□□□□□ -1.05
HDAC9-229ENST00000622668 C8orf59Q8N0T1 100 aaPredicted RBP8.49□□□□□ -1.05
HDAC9-229ENST00000622668 B3GNT7Q8NFL0 401 aa8.49□□□□□ -1.05
HDAC9-229ENST00000622668 OR10H4Q8NGA5 316 aa8.49□□□□□ -1.05
HDAC9-229ENST00000622668 HSH2DQ96JZ2 352 aa8.49□□□□□ -1.05
HDAC9-229ENST00000622668 ITPAQ9BY32 194 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms