RNA–Protein interactions for RNA: ENST00000622493.4

CLTCL1-212, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2 BASIC

Gene CLTCL1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-212ENST00000622493 SDF2Q99470 211 aa13.21□□□□□ -0.3
CLTCL1-212ENST00000622493 TSC22D3Q99576 134 aa13.21□□□□□ -0.3
CLTCL1-212ENST00000622493 LPAR4Q99677 370 aa13.21□□□□□ -0.3
CLTCL1-212ENST00000622493 PKP2Q99959 881 aa13.21□□□□□ -0.3
CLTCL1-212ENST00000622493 YIPF3Q9GZM5 350 aa13.21□□□□□ -0.3
CLTCL1-212ENST00000622493 ZNF350Q9GZX5 532 aa13.21□□□□□ -0.3
CLTCL1-212ENST00000622493 SLC38A1Q9H2H9 487 aa13.21□□□□□ -0.3
CLTCL1-212ENST00000622493 RUBCNLQ9H714 662 aa13.21□□□□□ -0.3
CLTCL1-212ENST00000622493 TRIM45Q9H8W5 580 aaPredicted RBP13.21□□□□□ -0.3
CLTCL1-212ENST00000622493 MTHFD2LQ9H903 347 aaPredicted RBP13.21□□□□□ -0.3
CLTCL1-212ENST00000622493 IL1RAPQ9NPH3 570 aa13.21□□□□□ -0.3
CLTCL1-212ENST00000622493 AGPAT4Q9NRZ5 378 aa13.21□□□□□ -0.3
CLTCL1-212ENST00000622493 SEC14L3Q9UDX4 400 aa13.21□□□□□ -0.3
CLTCL1-212ENST00000622493 RIMS3Q9UJD0 308 aa13.21□□□□□ -0.3
CLTCL1-212ENST00000622493 ZFHX2Q9C0A1 2572 aaPredicted RBP13.2□□□□□ -0.3
CLTCL1-212ENST00000622493 ZNF292O60281 2723 aa13.2□□□□□ -0.3
CLTCL1-212ENST00000622493 LOC102723996A0A087X1L8 192 aa13.2□□□□□ -0.3
CLTCL1-212ENST00000622493 TEX51A0A1B0GUA7 166 aa13.2□□□□□ -0.3
CLTCL1-212ENST00000622493 DPPA5A6NC42 116 aa13.2□□□□□ -0.3
CLTCL1-212ENST00000622493 SAGE2PA6NJ88 616 aa13.2□□□□□ -0.3
CLTCL1-212ENST00000622493 TMEM229AB2RXF0 380 aa13.2□□□□□ -0.3
CLTCL1-212ENST00000622493 CASQ2O14958 399 aaPredicted RBP13.2□□□□□ -0.3
CLTCL1-212ENST00000622493 TIPRLO75663 272 aa13.2□□□□□ -0.3
CLTCL1-212ENST00000622493 TNFSF15O95150 251 aa13.2□□□□□ -0.3
CLTCL1-212ENST00000622493 IGHEP01854 428 aa13.2□□□□□ -0.3
CLTCL1-212ENST00000622493 OPN1SWP03999 348 aa13.2□□□□□ -0.3
CLTCL1-212ENST00000622493 SEMG1P04279 462 aa13.2□□□□□ -0.3
CLTCL1-212ENST00000622493 TRHRP34981 398 aaPredicted RBP13.2□□□□□ -0.3
CLTCL1-212ENST00000622493 PEX19P40855 299 aa13.2□□□□□ -0.3
CLTCL1-212ENST00000622493 PPICP45877 212 aa13.2□□□□□ -0.3
CLTCL1-212ENST00000622493 PTDSS1P48651 473 aaKnown RBP13.2□□□□□ -0.3
CLTCL1-212ENST00000622493 GPR143P51810 404 aa13.2□□□□□ -0.3
CLTCL1-212ENST00000622493 SESN3P58005 492 aa13.2□□□□□ -0.3
CLTCL1-212ENST00000622493 FAAH2Q6GMR7 532 aa13.2□□□□□ -0.3
CLTCL1-212ENST00000622493 TMEM102Q8N9M5 508 aaPredicted RBP13.2□□□□□ -0.3
CLTCL1-212ENST00000622493 B3GNT7Q8NFL0 401 aa13.2□□□□□ -0.3
CLTCL1-212ENST00000622493 LRTOMTQ8WZ04 291 aa13.2□□□□□ -0.3
CLTCL1-212ENST00000622493 TPD52L3Q96J77 140 aa13.2□□□□□ -0.3
CLTCL1-212ENST00000622493 COL21A1Q96P44 957 aa13.2□□□□□ -0.3
CLTCL1-212ENST00000622493 SEMA4CQ9C0C4 833 aa13.2□□□□□ -0.3
CLTCL1-212ENST00000622493 SAP130Q9H0E3 1048 aa13.2□□□□□ -0.3
CLTCL1-212ENST00000622493 DTX4Q9Y2E6 619 aa13.2□□□□□ -0.3
CLTCL1-212ENST00000622493 GPR55Q9Y2T6 319 aaPredicted RBP13.2□□□□□ -0.3
CLTCL1-212ENST00000622493 WDR45Q9Y484 360 aa13.2□□□□□ -0.3
CLTCL1-212ENST00000622493 CCDC88CQ9P219 2028 aa13.2□□□□□ -0.3
CLTCL1-212ENST00000622493 DEAF1O75398 565 aaPredicted RBP13.19□□□□□ -0.3
CLTCL1-212ENST00000622493 CT45A8P0DMV1 189 aa13.19□□□□□ -0.3
CLTCL1-212ENST00000622493 CT45A9P0DMV2 189 aa13.19□□□□□ -0.3
CLTCL1-212ENST00000622493 TCN2P20062 427 aa13.19□□□□□ -0.3
CLTCL1-212ENST00000622493 KCNJ5P48544 419 aa13.19□□□□□ -0.3
CLTCL1-212ENST00000622493 FOXL2P58012 376 aa13.19□□□□□ -0.3
CLTCL1-212ENST00000622493 PSPHP78330 225 aa13.19□□□□□ -0.3
CLTCL1-212ENST00000622493 KCNJ10P78508 379 aa13.19□□□□□ -0.3
CLTCL1-212ENST00000622493 CHRNEQ04844 493 aa13.19□□□□□ -0.3
CLTCL1-212ENST00000622493 CYP27C1Q4G0S4 372 aa13.19□□□□□ -0.3
CLTCL1-212ENST00000622493 IFI44LQ53G44 452 aa13.19□□□□□ -0.3
CLTCL1-212ENST00000622493 CT45A2Q5DJT8 189 aa13.19□□□□□ -0.3
CLTCL1-212ENST00000622493 FRRS1Q6ZNA5 592 aa13.19□□□□□ -0.3
CLTCL1-212ENST00000622493 TIPARPQ7Z3E1 657 aaKnown RBP13.19□□□□□ -0.3
CLTCL1-212ENST00000622493 PIWIL3Q7Z3Z3 882 aaKnown RBP13.19□□□□□ -0.3
CLTCL1-212ENST00000622493 VTCN1Q7Z7D3 282 aa13.19□□□□□ -0.3
CLTCL1-212ENST00000622493 C17orf47Q8NEP4 570 aa13.19□□□□□ -0.3
CLTCL1-212ENST00000622493 PIK3R3Q92569 461 aa13.19□□□□□ -0.3
CLTCL1-212ENST00000622493 NACC2Q96BF6 587 aa13.19□□□□□ -0.3
CLTCL1-212ENST00000622493 CENPNQ96H22 339 aaPredicted RBP13.19□□□□□ -0.3
CLTCL1-212ENST00000622493 BDH2Q9BUT1 245 aa13.19□□□□□ -0.3
CLTCL1-212ENST00000622493 POLR1BQ9H9Y6 1135 aa13.19□□□□□ -0.3
CLTCL1-212ENST00000622493 FOXJ2Q9P0K8 574 aa13.19□□□□□ -0.3
CLTCL1-212ENST00000622493 IFT52Q9Y366 437 aa13.19□□□□□ -0.3
CLTCL1-212ENST00000622493 PTRH2Q9Y3E5 179 aaKnown RBP13.19□□□□□ -0.3
CLTCL1-212ENST00000622493 FAM186AA6NE01 2351 aa13.19□□□□□ -0.3
CLTCL1-212ENST00000622493 C2orf92A0A1B0GVN3 265 aa13.19□□□□□ -0.3
CLTCL1-212ENST00000622493 ANKRD33BA6NCL7 494 aa13.19□□□□□ -0.3
CLTCL1-212ENST00000622493 CLOCKO15516 846 aa13.19□□□□□ -0.3
CLTCL1-212ENST00000622493 TPST1O60507 370 aa13.19□□□□□ -0.3
CLTCL1-212ENST00000622493 FCMRO60667 390 aa13.19□□□□□ -0.3
CLTCL1-212ENST00000622493 KCNK2O95069 426 aa13.19□□□□□ -0.3
CLTCL1-212ENST00000622493 LDLRP01130 860 aa13.19□□□□□ -0.3
CLTCL1-212ENST00000622493 CAPNS1P04632 268 aa13.19□□□□□ -0.3
CLTCL1-212ENST00000622493 ALPPP05187 535 aa13.19□□□□□ -0.3
CLTCL1-212ENST00000622493 FABP3P05413 133 aa13.19□□□□□ -0.3
CLTCL1-212ENST00000622493 DRD5P21918 477 aa13.19□□□□□ -0.3
CLTCL1-212ENST00000622493 CD82P27701 267 aa13.19□□□□□ -0.3
CLTCL1-212ENST00000622493 PIGAP37287 484 aa13.19□□□□□ -0.3
CLTCL1-212ENST00000622493 FOLR3P41439 243 aa13.19□□□□□ -0.3
CLTCL1-212ENST00000622493 TRIP10Q15642 601 aa13.19□□□□□ -0.3
CLTCL1-212ENST00000622493 ATP6AP1Q15904 470 aa13.19□□□□□ -0.3
CLTCL1-212ENST00000622493 DUSP7Q16829 419 aa13.19□□□□□ -0.3
CLTCL1-212ENST00000622493 TYW3Q6IPR3 259 aaKnown RBP13.19□□□□□ -0.3
CLTCL1-212ENST00000622493 PAPD4Q6PIY7 484 aaKnown RBP13.19□□□□□ -0.3
CLTCL1-212ENST00000622493 SLC29A4Q7RTT9 530 aa13.19□□□□□ -0.3
CLTCL1-212ENST00000622493 ZDHHC21Q8IVQ6 265 aa13.19□□□□□ -0.3
CLTCL1-212ENST00000622493 PEX5LQ8IYB4 626 aa13.19□□□□□ -0.3
CLTCL1-212ENST00000622493 NLGN4XQ8N0W4 816 aa13.19□□□□□ -0.3
CLTCL1-212ENST00000622493 ZNF321PQ8N8H1 164 aa13.19□□□□□ -0.3
CLTCL1-212ENST00000622493 SMYD1Q8NB12 490 aa13.19□□□□□ -0.3
CLTCL1-212ENST00000622493 NFAM1Q8NET5 270 aaPredicted RBP13.19□□□□□ -0.3
CLTCL1-212ENST00000622493 NLGN4YQ8NFZ3 816 aaPredicted RBP13.19□□□□□ -0.3
CLTCL1-212ENST00000622493 FAM110BQ8TC76 370 aa13.19□□□□□ -0.3
CLTCL1-212ENST00000622493 SPPL2AQ8TCT8 520 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms