RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 NUP62P37198 522 aaPredicted RBP3.22□□□□□ -1.89
BRCA1-229ENST00000621897 STARP49675 285 aa3.22□□□□□ -1.89
BRCA1-229ENST00000621897 NOP14P78316 857 aaKnown RBP3.22□□□□□ -1.89
BRCA1-229ENST00000621897 DNAJC3Q13217 504 aa3.22□□□□□ -1.89
BRCA1-229ENST00000621897 CUL1Q13616 776 aa3.22□□□□□ -1.89
BRCA1-229ENST00000621897 SLC36A3Q495N2 470 aa3.22□□□□□ -1.89
BRCA1-229ENST00000621897 NHLRC3Q5JS37 347 aa3.22□□□□□ -1.89
BRCA1-229ENST00000621897 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.22□□□□□ -1.89
BRCA1-229ENST00000621897 PRAMEF8Q5VWM4 474 aa3.22□□□□□ -1.89
BRCA1-229ENST00000621897 FAM46CQ5VWP2 391 aa3.22□□□□□ -1.89
BRCA1-229ENST00000621897 TCEAL6Q6IPX3 200 aa3.22□□□□□ -1.89
BRCA1-229ENST00000621897 ZNF770Q6IQ21 691 aaPredicted RBP3.22□□□□□ -1.89
BRCA1-229ENST00000621897 WDR88Q6ZMY6 472 aa3.22□□□□□ -1.89
BRCA1-229ENST00000621897 ADAMTSL2Q86TH1 951 aa3.22□□□□□ -1.89
BRCA1-229ENST00000621897 BIVMQ86UB2 503 aa3.22□□□□□ -1.89
BRCA1-229ENST00000621897 OR9A1PQ8NGU1 263 aa3.22□□□□□ -1.89
BRCA1-229ENST00000621897 GOLGA5Q8TBA6 731 aa3.22□□□□□ -1.89
BRCA1-229ENST00000621897 SLC22A8Q8TCC7 542 aa3.22□□□□□ -1.89
BRCA1-229ENST00000621897 RNASE8Q8TDE3 154 aaKnown RBP3.22□□□□□ -1.89
BRCA1-229ENST00000621897 HEXDCQ8WVB3 486 aa3.22□□□□□ -1.89
BRCA1-229ENST00000621897 DNAJA4Q8WW22 397 aaPredicted RBP3.22□□□□□ -1.89
BRCA1-229ENST00000621897 ST6GALNAC6Q969X2 333 aa3.22□□□□□ -1.89
BRCA1-229ENST00000621897 RFT1Q96AA3 541 aa3.22□□□□□ -1.89
BRCA1-229ENST00000621897 RASD2Q96D21 266 aa3.22□□□□□ -1.89
BRCA1-229ENST00000621897 IFT74Q96LB3 600 aa3.22□□□□□ -1.89
BRCA1-229ENST00000621897 JPH2Q9BR39 696 aaPredicted RBP3.22□□□□□ -1.89
BRCA1-229ENST00000621897 UQCC2Q9BRT2 126 aa3.22□□□□□ -1.89
BRCA1-229ENST00000621897 ATG10Q9H0Y0 220 aa3.22□□□□□ -1.89
BRCA1-229ENST00000621897 TRPV6Q9H1D0 765 aa3.22□□□□□ -1.89
BRCA1-229ENST00000621897 TMEM161AQ9NX61 479 aa3.22□□□□□ -1.89
BRCA1-229ENST00000621897 SPATA2Q9UM82 520 aa3.22□□□□□ -1.89
BRCA1-229ENST00000621897 NUDCQ9Y266 331 aa3.22□□□□□ -1.89
BRCA1-229ENST00000621897 AP4B1Q9Y6B7 739 aa3.22□□□□□ -1.89
BRCA1-229ENST00000621897 POGZQ7Z3K3 1410 aa3.21□□□□□ -1.9
BRCA1-229ENST00000621897 LOC390937A0A1W2PQ73 354 aa3.21□□□□□ -1.9
BRCA1-229ENST00000621897 MAGEB16A2A368 324 aa3.21□□□□□ -1.9
BRCA1-229ENST00000621897 SPECC1L-ADORA2AF8WAN1 911 aa3.21□□□□□ -1.9
BRCA1-229ENST00000621897 K7ERQ8 282 aa3.21□□□□□ -1.9
BRCA1-229ENST00000621897 LGALS8O00214 317 aa3.21□□□□□ -1.9
BRCA1-229ENST00000621897 ST8SIA3O43173 380 aa3.21□□□□□ -1.9
BRCA1-229ENST00000621897 LRRTM2O43300 516 aa3.21□□□□□ -1.9
BRCA1-229ENST00000621897 SELENOFO60613 162 aa3.21□□□□□ -1.9
BRCA1-229ENST00000621897 B4GALT2O60909 372 aa3.21□□□□□ -1.9
BRCA1-229ENST00000621897 CXCL14O95715 111 aa3.21□□□□□ -1.9
BRCA1-229ENST00000621897 SP9P0CG40 484 aa3.21□□□□□ -1.9
BRCA1-229ENST00000621897 EPB41P11171 864 aaKnown RBP3.21□□□□□ -1.9
BRCA1-229ENST00000621897 U2AF2P26368 475 aaKnown RBP eCLIP3.21□□□□□ -1.9
BRCA1-229ENST00000621897 MAGEA1P43355 309 aa3.21□□□□□ -1.9
BRCA1-229ENST00000621897 CDKN1BP46527 198 aa3.21□□□□□ -1.9
BRCA1-229ENST00000621897 SERPINH1P50454 418 aaKnown RBP3.21□□□□□ -1.9
BRCA1-229ENST00000621897 SMSP52788 366 aa3.21□□□□□ -1.9
BRCA1-229ENST00000621897 BLVRAP53004 296 aa3.21□□□□□ -1.9
BRCA1-229ENST00000621897 PLTPP55058 493 aa3.21□□□□□ -1.9
BRCA1-229ENST00000621897 BACE1P56817 501 aa3.21□□□□□ -1.9
BRCA1-229ENST00000621897 SARNPP82979 210 aaKnown RBP3.21□□□□□ -1.9
BRCA1-229ENST00000621897 CNTN1Q12860 1018 aa3.21□□□□□ -1.9
BRCA1-229ENST00000621897 MAB21L1Q13394 359 aa3.21□□□□□ -1.9
BRCA1-229ENST00000621897 PDE7AQ13946 482 aa3.21□□□□□ -1.9
BRCA1-229ENST00000621897 IL18Q14116 193 aa3.21□□□□□ -1.9
BRCA1-229ENST00000621897 KRT31Q15323 416 aa3.21□□□□□ -1.9
BRCA1-229ENST00000621897 MAPK11Q15759 364 aa3.21□□□□□ -1.9
BRCA1-229ENST00000621897 CCL14Q16627 93 aa3.21□□□□□ -1.9
BRCA1-229ENST00000621897 NKAIN1Q4KMZ8 207 aa3.21□□□□□ -1.9
BRCA1-229ENST00000621897 MUC21Q5SSG8 566 aa3.21□□□□□ -1.9
BRCA1-229ENST00000621897 C8orf74Q6P047 294 aa3.21□□□□□ -1.9
BRCA1-229ENST00000621897 CASC4Q6P4E1 433 aa3.21□□□□□ -1.9
BRCA1-229ENST00000621897 ERICH5Q6P6B1 374 aa3.21□□□□□ -1.9
BRCA1-229ENST00000621897 TMEM182Q6ZP80 229 aaPredicted RBP3.21□□□□□ -1.9
BRCA1-229ENST00000621897 C17orf107Q6ZR85 190 aa3.21□□□□□ -1.9
BRCA1-229ENST00000621897 NANOGNBQ7Z5D8 188 aa3.21□□□□□ -1.9
BRCA1-229ENST00000621897 LUZP1Q86V48 1076 aa3.21□□□□□ -1.9
BRCA1-229ENST00000621897 SLC7A5P1Q8MH63 180 aa3.21□□□□□ -1.9
BRCA1-229ENST00000621897 SLC43A2Q8N370 569 aa3.21□□□□□ -1.9
BRCA1-229ENST00000621897 OR10T2Q8NGX3 314 aa3.21□□□□□ -1.9
BRCA1-229ENST00000621897 ANKRD7Q92527 254 aa3.21□□□□□ -1.9
BRCA1-229ENST00000621897 CDKL2Q92772 493 aa3.21□□□□□ -1.9
BRCA1-229ENST00000621897 DTD2Q96FN9 168 aa3.21□□□□□ -1.9
BRCA1-229ENST00000621897 SERAC1Q96JX3 654 aa3.21□□□□□ -1.9
BRCA1-229ENST00000621897 ALKBH3Q96Q83 286 aaPredicted RBP3.21□□□□□ -1.9
BRCA1-229ENST00000621897 APOL2Q9BQE5 337 aa3.21□□□□□ -1.9
BRCA1-229ENST00000621897 ZNF416Q9BWM5 594 aa3.21□□□□□ -1.9
BRCA1-229ENST00000621897 PINK1Q9BXM7 581 aa3.21□□□□□ -1.9
BRCA1-229ENST00000621897 UBQLN3Q9H347 655 aa3.21□□□□□ -1.9
BRCA1-229ENST00000621897 TDRD3Q9H7E2 651 aaKnown RBP3.21□□□□□ -1.9
BRCA1-229ENST00000621897 MINDY3Q9H8M7 445 aa3.21□□□□□ -1.9
BRCA1-229ENST00000621897 LMAN1LQ9HAT1 526 aa3.21□□□□□ -1.9
BRCA1-229ENST00000621897 PLEKHA3Q9HB20 300 aa3.21□□□□□ -1.9
BRCA1-229ENST00000621897 HYPKQ9NX55 129 aa3.21□□□□□ -1.9
BRCA1-229ENST00000621897 KLHL28Q9NXS3 571 aa3.21□□□□□ -1.9
BRCA1-229ENST00000621897 THYN1Q9P016 225 aa3.21□□□□□ -1.9
BRCA1-229ENST00000621897 SPATA7Q9P0W8 599 aa3.21□□□□□ -1.9
BRCA1-229ENST00000621897 MTRF1LQ9UGC7 380 aaKnown RBP3.21□□□□□ -1.9
BRCA1-229ENST00000621897 UBQLN2Q9UHD9 624 aa3.21□□□□□ -1.9
BRCA1-229ENST00000621897 MFHAS1Q9Y4C4 1052 aa3.21□□□□□ -1.9
BRCA1-229ENST00000621897 TRAV6A0A075B6T7 132 aa3.2□□□□□ -1.9
BRCA1-229ENST00000621897 LOC100506127A0A0U1RQW1 187 aa3.2□□□□□ -1.9
BRCA1-229ENST00000621897 A0A1B0GTQ1 180 aa3.2□□□□□ -1.9
BRCA1-229ENST00000621897 FAM168BA1KXE4 195 aa3.2□□□□□ -1.9
BRCA1-229ENST00000621897 GOLGA8SH3BPF8 625 aa3.2□□□□□ -1.9
BRCA1-229ENST00000621897 TLR4O00206 839 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms