RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 ITGAMP11215 1152 aa19.96■□□□□ 0.79
SPAST-204ENST00000621856 PRKAR1BP31321 381 aa19.96■□□□□ 0.79
SPAST-204ENST00000621856 GALNSP34059 522 aa19.96■□□□□ 0.79
SPAST-204ENST00000621856 MAP3K8P41279 467 aa19.96■□□□□ 0.79
SPAST-204ENST00000621856 HMGA2P52926 109 aa19.96■□□□□ 0.79
SPAST-204ENST00000621856 CLPPQ16740 277 aaPredicted RBP19.96■□□□□ 0.79
SPAST-204ENST00000621856 FGD3Q5JSP0 725 aa19.96■□□□□ 0.79
SPAST-204ENST00000621856 FIGNL1Q6PIW4 674 aa19.96■□□□□ 0.79
SPAST-204ENST00000621856 DHRS4L2Q6PKH6 230 aa19.96■□□□□ 0.79
SPAST-204ENST00000621856 QSOX2Q6ZRP7 698 aa19.96■□□□□ 0.79
SPAST-204ENST00000621856 MED25Q71SY5 747 aa19.96■□□□□ 0.79
SPAST-204ENST00000621856 C8orf59Q8N0T1 100 aaPredicted RBP19.96■□□□□ 0.79
SPAST-204ENST00000621856 ZNF619Q8N2I2 560 aa19.96■□□□□ 0.79
SPAST-204ENST00000621856 ALPK1Q96QP1 1244 aa19.96■□□□□ 0.79
SPAST-204ENST00000621856 FEVQ99581 238 aa19.96■□□□□ 0.79
SPAST-204ENST00000621856 LMF2Q9BU23 707 aaKnown RBP19.96■□□□□ 0.79
SPAST-204ENST00000621856 ZNF350Q9GZX5 532 aa19.96■□□□□ 0.79
SPAST-204ENST00000621856 PNO1Q9NRX1 252 aaKnown RBP19.96■□□□□ 0.79
SPAST-204ENST00000621856 KLHL28Q9NXS3 571 aa19.96■□□□□ 0.79
SPAST-204ENST00000621856 RARRES3Q9UL19 164 aa19.96■□□□□ 0.79
SPAST-204ENST00000621856 TMCC3Q9ULS5 477 aa19.96■□□□□ 0.79
SPAST-204ENST00000621856 ZNF443Q9Y2A4 671 aaPredicted RBP19.96■□□□□ 0.79
SPAST-204ENST00000621856 PCDHGA5Q9Y5G8 931 aa19.96■□□□□ 0.79
SPAST-204ENST00000621856 LOC100130705A0A1B0GUX0 176 aa19.96■□□□□ 0.79
SPAST-204ENST00000621856 PCDH17O14917 1159 aa19.96■□□□□ 0.79
SPAST-204ENST00000621856 SOX30O94993 753 aa19.96■□□□□ 0.79
SPAST-204ENST00000621856 H1F0P07305 194 aaKnown RBP19.96■□□□□ 0.79
SPAST-204ENST00000621856 ANXA8P13928 327 aa19.96■□□□□ 0.79
SPAST-204ENST00000621856 LIMS1P48059 325 aa19.96■□□□□ 0.79
SPAST-204ENST00000621856 EMDP50402 254 aa19.96■□□□□ 0.79
SPAST-204ENST00000621856 SMIM11AP58511 58 aa19.96■□□□□ 0.79
SPAST-204ENST00000621856 LARS2Q15031 903 aaKnown RBP19.96■□□□□ 0.79
SPAST-204ENST00000621856 SLC5A8Q8N695 610 aa19.96■□□□□ 0.79
SPAST-204ENST00000621856 OR6T1Q8NGN1 323 aa19.96■□□□□ 0.79
SPAST-204ENST00000621856 ARHGDIGQ99819 225 aa19.96■□□□□ 0.79
SPAST-204ENST00000621856 NMNAT1Q9HAN9 279 aaPredicted RBP19.96■□□□□ 0.79
SPAST-204ENST00000621856 C17orf105B2RV13 164 aa19.95■□□□□ 0.78
SPAST-204ENST00000621856 H3BNH8 94 aa19.95■□□□□ 0.78
SPAST-204ENST00000621856 UGT2B11O75310 529 aa19.95■□□□□ 0.78
SPAST-204ENST00000621856 CYP4B1P13584 511 aa19.95■□□□□ 0.78
SPAST-204ENST00000621856 IL7RP16871 459 aa19.95■□□□□ 0.78
SPAST-204ENST00000621856 POLR2IP36954 125 aaKnown RBP19.95■□□□□ 0.78
SPAST-204ENST00000621856 GRK6P43250 576 aa19.95■□□□□ 0.78
SPAST-204ENST00000621856 RHBDD2Q6NTF9 364 aa19.95■□□□□ 0.78
SPAST-204ENST00000621856 PRSS58Q8IYP2 241 aa19.95■□□□□ 0.78
SPAST-204ENST00000621856 HOXB13Q92826 284 aaPredicted RBP19.95■□□□□ 0.78
SPAST-204ENST00000621856 TSLPQ969D9 159 aa19.95■□□□□ 0.78
SPAST-204ENST00000621856 ING2Q9H160 280 aa19.95■□□□□ 0.78
SPAST-204ENST00000621856 MKKSQ9NPJ1 570 aaPredicted RBP19.95■□□□□ 0.78
SPAST-204ENST00000621856 R4GN57 208 aa19.95■□□□□ 0.78
SPAST-204ENST00000621856 BCKDKO14874 412 aa19.94■□□□□ 0.78
SPAST-204ENST00000621856 SEMA7AO75326 666 aa19.94■□□□□ 0.78
SPAST-204ENST00000621856 UGT2B17O75795 530 aa19.94■□□□□ 0.78
SPAST-204ENST00000621856 LDOC1O95751 146 aaPredicted RBP19.94■□□□□ 0.78
SPAST-204ENST00000621856 SMIM18P0DKX4 95 aa19.94■□□□□ 0.78
SPAST-204ENST00000621856 FUT4P22083 530 aa19.94■□□□□ 0.78
SPAST-204ENST00000621856 FUT7Q11130 342 aa19.94■□□□□ 0.78
SPAST-204ENST00000621856 VWA2Q5GFL6 755 aa19.94■□□□□ 0.78
SPAST-204ENST00000621856 OR9Q2Q8NGE9 314 aa19.94■□□□□ 0.78
SPAST-204ENST00000621856 VSTM2LQ96N03 204 aa19.94■□□□□ 0.78
SPAST-204ENST00000621856 FNDC11Q9BVV2 318 aa19.94■□□□□ 0.78
SPAST-204ENST00000621856 OR10A5Q9H207 317 aa19.94■□□□□ 0.78
SPAST-204ENST00000621856 FBXO34Q9NWN3 711 aa19.94■□□□□ 0.78
SPAST-204ENST00000621856 FTSJ1Q9UET6 329 aa19.94■□□□□ 0.78
SPAST-204ENST00000621856 A4GNTQ9UNA3 340 aa19.94■□□□□ 0.78
SPAST-204ENST00000621856 HCN4Q9Y3Q4 1203 aa19.94■□□□□ 0.78
SPAST-204ENST00000621856 DPPA5A6NC42 116 aa19.93■□□□□ 0.78
SPAST-204ENST00000621856 A8MUA0 341 aa19.93■□□□□ 0.78
SPAST-204ENST00000621856 D6RAR5 112 aa19.93■□□□□ 0.78
SPAST-204ENST00000621856 SLC16A6O15403 523 aa19.93■□□□□ 0.78
SPAST-204ENST00000621856 DYRK3O43781 588 aa19.93■□□□□ 0.78
SPAST-204ENST00000621856 SCRG1O75711 98 aa19.93■□□□□ 0.78
SPAST-204ENST00000621856 ZNF883P0CG24 379 aa19.93■□□□□ 0.78
SPAST-204ENST00000621856 RFX3P48380 749 aa19.93■□□□□ 0.78
SPAST-204ENST00000621856 PSG6Q00889 435 aa19.93■□□□□ 0.78
SPAST-204ENST00000621856 ZNF836Q6ZNA1 936 aa19.93■□□□□ 0.78
SPAST-204ENST00000621856 THAP5Q7Z6K1 395 aa19.93■□□□□ 0.78
SPAST-204ENST00000621856 TMEM151BQ8IW70 566 aa19.93■□□□□ 0.78
SPAST-204ENST00000621856 CLIP3Q96DZ5 547 aa19.93■□□□□ 0.78
SPAST-204ENST00000621856 DHRS1Q96LJ7 313 aa19.93■□□□□ 0.78
SPAST-204ENST00000621856 PRRC1Q96M27 445 aa19.93■□□□□ 0.78
SPAST-204ENST00000621856 SAP130Q9H0E3 1048 aa19.93■□□□□ 0.78
SPAST-204ENST00000621856 ZNF556Q9HAH1 456 aa19.93■□□□□ 0.78
SPAST-204ENST00000621856 POLE3Q9NRF9 147 aa19.93■□□□□ 0.78
SPAST-204ENST00000621856 PAPOLBQ9NRJ5 636 aaKnown RBP19.93■□□□□ 0.78
SPAST-204ENST00000621856 RLIMQ9NVW2 624 aa19.93■□□□□ 0.78
SPAST-204ENST00000621856 ACAD8Q9UKU7 415 aa19.93■□□□□ 0.78
SPAST-204ENST00000621856 GPR55Q9Y2T6 319 aaPredicted RBP19.93■□□□□ 0.78
SPAST-204ENST00000621856 KMT2EQ8IZD2 1858 aa19.93■□□□□ 0.78
SPAST-204ENST00000621856 IGKV3D-11A0A0A0MRZ8 115 aa19.93■□□□□ 0.78
SPAST-204ENST00000621856 NPIPA5A0A0B4J1W7 369 aa19.93■□□□□ 0.78
SPAST-204ENST00000621856 TRBV4-1A0A0J9YWV2 114 aa19.93■□□□□ 0.78
SPAST-204ENST00000621856 AGAP5A6NIR3 686 aa19.93■□□□□ 0.78
SPAST-204ENST00000621856 NPIPA7E9PJI5 369 aa19.93■□□□□ 0.78
SPAST-204ENST00000621856 FRS3O43559 492 aa19.93■□□□□ 0.78
SPAST-204ENST00000621856 KIAA0513O60268 411 aa19.93■□□□□ 0.78
SPAST-204ENST00000621856 SMNDC1O75940 238 aaKnown RBP eCLIP19.93■□□□□ 0.78
SPAST-204ENST00000621856 DBIP07108 87 aaKnown RBP19.93■□□□□ 0.78
SPAST-204ENST00000621856 THBS1P07996 1170 aa19.93■□□□□ 0.78
SPAST-204ENST00000621856 NPIPA8P0DM63 369 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms