RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 NAXEQ8NCW5 288 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 OR51G2Q8NGK0 314 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 PPP1R35Q8TAP8 253 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 RHBDD1Q8TEB9 315 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 ASB13Q8WXK3 278 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 CORO2AQ92828 525 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 ACDQ96AP0 544 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 PIGMQ9H3S5 423 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 BEX1Q9HBH7 125 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 ADAMTSL3P82987 1691 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 A0A1W2PQL4 384 aaPredicted RBP6.83□□□□□ -1.32
COLCA1-205ENST00000620864 FANCGO15287 622 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 OR4Q2P0C623 313 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 TAS2R46P59540 309 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 RELBQ01201 579 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 RSU1Q15404 277 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 MBLAC2Q68D91 279 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 BRICD5Q6PL45 260 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 DCUN1D3Q8IWE4 304 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 SLC35F3Q8IY50 421 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 FAM58AQ8N1B3 248 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 OR1S1Q8NH92 325 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 ZBTB45Q96K62 511 aaPredicted RBP6.83□□□□□ -1.32
COLCA1-205ENST00000620864 NAA11Q9BSU3 229 aaPredicted RBP6.83□□□□□ -1.32
COLCA1-205ENST00000620864 NMUR1Q9HB89 426 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 POLE4Q9NR33 117 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 IL17RBQ9NRM6 502 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 ERVK13-1Q9NX77 482 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 A0A1W2PPV4 95 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 MEIOCA2RUB1 952 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 F10P00742 488 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 DLDP09622 509 aaKnown RBP6.83□□□□□ -1.32
COLCA1-205ENST00000620864 GIPRP48546 466 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 CAV2P51636 162 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 TAS2R19P59542 299 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 AWAT2Q6E213 333 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 FIGNL1Q6PIW4 674 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 PAPD5Q8NDF8 572 aaKnown RBP6.83□□□□□ -1.32
COLCA1-205ENST00000620864 OR4F6Q8NGB9 312 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 OR2T4Q8NH00 348 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 LRCH3Q96II8 777 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 MICU1Q9BPX6 476 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 CHRNA9Q9UGM1 479 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 FKBPLQ9UIM3 349 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 ABCC6O95255 1503 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 K7EPK0 472 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 SNRNP70P08621 437 aaKnown RBP6.83□□□□□ -1.32
COLCA1-205ENST00000620864 ELK4P28324 431 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 HBG1P69891 147 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 HBG2P69892 147 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 LYRM7Q5U5X0 104 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 BRAT1Q6PJG6 821 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 LARP4Q71RC2 724 aaKnown RBP eCLIP6.83□□□□□ -1.32
COLCA1-205ENST00000620864 VSIG10LQ86VR7 867 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 TMEM139Q8IV31 216 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 FAM71E2Q8N5Q1 922 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 ADAMTS16Q8TE57 1224 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 GTF2H4Q92759 462 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 C8orf33Q9H7E9 229 aaPredicted RBP6.83□□□□□ -1.32
COLCA1-205ENST00000620864 MMP20O60882 483 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 STAG3L2P0CL84 134 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 PTBP1P26599 531 aaKnown RBP eCLIP6.83□□□□□ -1.327e-6■■□□□ 11.4
COLCA1-205ENST00000620864 MSX1P28360 303 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 SLC1A3P43003 542 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 PPT1P50897 306 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 Q7L0L9 218 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 SSX7Q7RTT5 188 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 LIX1LQ8IVB5 337 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 SLC25A44Q96H78 314 aaPredicted RBP6.83□□□□□ -1.32
COLCA1-205ENST00000620864 PWWP2AQ96N64 755 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 MTERF1Q99551 399 aaKnown RBP6.83□□□□□ -1.32
COLCA1-205ENST00000620864 CMSS1Q9BQ75 279 aaKnown RBP6.83□□□□□ -1.32
COLCA1-205ENST00000620864 SEC22CQ9BRL7 303 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 NMNAT2Q9BZQ4 307 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 MAN2C1Q9NTJ4 1040 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 LYRM2Q9NU23 88 aaPredicted RBP6.83□□□□□ -1.32
COLCA1-205ENST00000620864 TSPAN11A1L157 253 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 SCAMP2O15127 329 aaKnown RBP6.83□□□□□ -1.32
COLCA1-205ENST00000620864 HSD17B1P14061 328 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 AQP2P41181 271 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 EEF1A1P68104 462 aaKnown RBP6.83□□□□□ -1.32
COLCA1-205ENST00000620864 PCGF3Q3KNV8 242 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 EEF1A1P5Q5VTE0 462 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 TMEM220Q6QAJ8 160 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 THOC6Q86W42 341 aaKnown RBP6.83□□□□□ -1.32
COLCA1-205ENST00000620864 OR6N2Q8NGY6 317 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 OR2T11Q8NH01 316 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 ZNF461Q8TAF7 563 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 LRRN4Q8WUT4 740 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 RBMXL1Q96E39 390 aaKnown RBP6.83□□□□□ -1.32
COLCA1-205ENST00000620864 MEAF6Q9HAF1 191 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 EMC7Q9NPA0 242 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 FBXW11Q9UKB1 542 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 SCML2Q9UQR0 700 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 BACE2Q9Y5Z0 518 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 ANKRD26Q9UPS8 1709 aa6.82□□□□□ -1.32
COLCA1-205ENST00000620864 MTMR11A4FU01 709 aa6.82□□□□□ -1.32
COLCA1-205ENST00000620864 TUBAL3A6NHL2 446 aa6.82□□□□□ -1.32
COLCA1-205ENST00000620864 A8MVM7 634 aa6.82□□□□□ -1.32
COLCA1-205ENST00000620864 VEGFDO43915 354 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms