RNA–Protein interactions for RNA: ENST00000620208.1

AC009560.1-201, humanhuman

BASIC

Gene AC009560.1, Length 434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009560.1-201ENST00000620208 DIO3P55073 304 aa12.91□□□□□ -0.34
AC009560.1-201ENST00000620208 MRPS22P82650 360 aaKnown RBP12.91□□□□□ -0.34
AC009560.1-201ENST00000620208 NNATQ16517 81 aa12.91□□□□□ -0.34
AC009560.1-201ENST00000620208 NHSL2Q5HYW2 709 aa12.91□□□□□ -0.34
AC009560.1-201ENST00000620208 ATG16L1Q676U5 607 aa12.91□□□□□ -0.34
AC009560.1-201ENST00000620208 TRIM42Q8IWZ5 723 aa12.91□□□□□ -0.34
AC009560.1-201ENST00000620208 ZNF808Q8N4W9 903 aaPredicted RBP12.91□□□□□ -0.34
AC009560.1-201ENST00000620208 KRTCAP2Q8N6L1 136 aa12.91□□□□□ -0.34
AC009560.1-201ENST00000620208 NUP43Q8NFH3 380 aa12.91□□□□□ -0.34
AC009560.1-201ENST00000620208 OR8J2Q8NGG1 315 aa12.91□□□□□ -0.34
AC009560.1-201ENST00000620208 NEIL3Q8TAT5 605 aa12.91□□□□□ -0.34
AC009560.1-201ENST00000620208 ADOQ96SZ5 270 aa12.91□□□□□ -0.34
AC009560.1-201ENST00000620208 PRPF18Q99633 342 aaKnown RBP12.91□□□□□ -0.34
AC009560.1-201ENST00000620208 PAIP2Q9BPZ3 127 aaKnown RBP12.91□□□□□ -0.34
AC009560.1-201ENST00000620208 C1orf50Q9BV19 199 aa12.91□□□□□ -0.34
AC009560.1-201ENST00000620208 MANSC1Q9H8J5 431 aa12.91□□□□□ -0.34
AC009560.1-201ENST00000620208 C3orf14Q9HBI5 128 aa12.91□□□□□ -0.34
AC009560.1-201ENST00000620208 DDX18Q9NVP1 670 aaKnown RBP12.91□□□□□ -0.34
AC009560.1-201ENST00000620208 NKIRAS1Q9NYS0 192 aa12.91□□□□□ -0.34
AC009560.1-201ENST00000620208 NOP53Q9NZM5 478 aaKnown RBP12.91□□□□□ -0.34
AC009560.1-201ENST00000620208 SUCOQ9UBS9 1254 aaKnown RBP12.91□□□□□ -0.34
AC009560.1-201ENST00000620208 C15orf41Q9Y2V0 281 aa12.91□□□□□ -0.34
AC009560.1-201ENST00000620208 LIPGQ9Y5X9 500 aa12.91□□□□□ -0.34
AC009560.1-201ENST00000620208 CROCCQ5TZA2 2017 aa12.91□□□□□ -0.34
AC009560.1-201ENST00000620208 MYO7BQ6PIF6 2116 aa12.91□□□□□ -0.34
AC009560.1-201ENST00000620208 SLCO1B7G3V0H7 640 aa12.9□□□□□ -0.34
AC009560.1-201ENST00000620208 SDHDO14521 159 aa12.9□□□□□ -0.34
AC009560.1-201ENST00000620208 ZNF195O14628 629 aa12.9□□□□□ -0.34
AC009560.1-201ENST00000620208 SNPHO15079 494 aa12.9□□□□□ -0.34
AC009560.1-201ENST00000620208 HDAC3O15379 428 aa12.9□□□□□ -0.34
AC009560.1-201ENST00000620208 CDC40O60508 579 aaKnown RBP eCLIP12.9□□□□□ -0.34
AC009560.1-201ENST00000620208 SOX30O94993 753 aa12.9□□□□□ -0.34
AC009560.1-201ENST00000620208 ENDOUP21128 410 aaKnown RBP12.9□□□□□ -0.34
AC009560.1-201ENST00000620208 MAN2A2P49641 1150 aa12.9□□□□□ -0.34
AC009560.1-201ENST00000620208 WNT3P56703 355 aa12.9□□□□□ -0.34
AC009560.1-201ENST00000620208 GTF3C1Q12789 2109 aa12.9□□□□□ -0.34
AC009560.1-201ENST00000620208 PDCD2Q16342 344 aaPredicted RBP12.9□□□□□ -0.34
AC009560.1-201ENST00000620208 LSM12Q3MHD2 195 aaKnown RBP12.9□□□□□ -0.34
AC009560.1-201ENST00000620208 AP1ARQ63HQ0 302 aa12.9□□□□□ -0.34
AC009560.1-201ENST00000620208 HDXQ7Z353 690 aa12.9□□□□□ -0.34
AC009560.1-201ENST00000620208 MRGPRGQ86SM5 289 aa12.9□□□□□ -0.34
AC009560.1-201ENST00000620208 EID3Q8N140 333 aa12.9□□□□□ -0.34
AC009560.1-201ENST00000620208 CDRT4Q8N9R6 151 aa12.9□□□□□ -0.34
AC009560.1-201ENST00000620208 ZNF75CPQ92670 426 aaPredicted RBP12.9□□□□□ -0.34
AC009560.1-201ENST00000620208 MAELQ96JY0 434 aaKnown RBP12.9□□□□□ -0.34
AC009560.1-201ENST00000620208 ATP6V1G3Q96LB4 118 aa12.9□□□□□ -0.34
AC009560.1-201ENST00000620208 ZNF597Q96LX8 424 aa12.9□□□□□ -0.34
AC009560.1-201ENST00000620208 NUF2Q9BZD4 464 aa12.9□□□□□ -0.34
AC009560.1-201ENST00000620208 TP63Q9H3D4 680 aaPredicted RBP12.9□□□□□ -0.34
AC009560.1-201ENST00000620208 ATAD3AQ9NVI7 634 aa12.9□□□□□ -0.34
AC009560.1-201ENST00000620208 CBLCQ9ULV8 474 aa12.9□□□□□ -0.34
AC009560.1-201ENST00000620208 KLF2Q9Y5W3 355 aaPredicted RBP12.9□□□□□ -0.34
AC009560.1-201ENST00000620208 PRAMEF25A6NGN4 478 aa12.89□□□□□ -0.35
AC009560.1-201ENST00000620208 B4DXG7 233 aa12.89□□□□□ -0.35
AC009560.1-201ENST00000620208 NPIPA2E9PIF3 369 aa12.89□□□□□ -0.35
AC009560.1-201ENST00000620208 NPIPA3F8WFD2 350 aa12.89□□□□□ -0.35
AC009560.1-201ENST00000620208 ESRRAP11474 423 aaPredicted RBP12.89□□□□□ -0.35
AC009560.1-201ENST00000620208 CYP4B1P13584 511 aa12.89□□□□□ -0.35
AC009560.1-201ENST00000620208 LBPP18428 481 aa12.89□□□□□ -0.35
AC009560.1-201ENST00000620208 LCN1P31025 176 aa12.89□□□□□ -0.35
AC009560.1-201ENST00000620208 GABRA3P34903 492 aa12.89□□□□□ -0.35
AC009560.1-201ENST00000620208 PHC1P78364 1004 aa12.89□□□□□ -0.35
AC009560.1-201ENST00000620208 HSPB3Q12988 150 aa12.89□□□□□ -0.35
AC009560.1-201ENST00000620208 DECR1Q16698 335 aa12.89□□□□□ -0.35
AC009560.1-201ENST00000620208 VASNQ6EMK4 673 aa12.89□□□□□ -0.35
AC009560.1-201ENST00000620208 RTL6Q6ICC9 239 aa12.89□□□□□ -0.35
AC009560.1-201ENST00000620208 TMEM211Q6ICI0 200 aa12.89□□□□□ -0.35
AC009560.1-201ENST00000620208 MFSD12Q6NUT3 480 aa12.89□□□□□ -0.35
AC009560.1-201ENST00000620208 SPATA19Q7Z5L4 167 aa12.89□□□□□ -0.35
AC009560.1-201ENST00000620208 PLCZ1Q86YW0 608 aa12.89□□□□□ -0.35
AC009560.1-201ENST00000620208 WDR75Q8IWA0 830 aaKnown RBP12.89□□□□□ -0.35
AC009560.1-201ENST00000620208 MARVELD2Q8N4S9 558 aa12.89□□□□□ -0.35
AC009560.1-201ENST00000620208 OR1J4Q8NGS1 313 aa12.89□□□□□ -0.35
AC009560.1-201ENST00000620208 TESCQ96BS2 214 aa12.89□□□□□ -0.35
AC009560.1-201ENST00000620208 SARAFQ96BY9 339 aa12.89□□□□□ -0.35
AC009560.1-201ENST00000620208 FAM120BQ96EK7 910 aaKnown RBP12.89□□□□□ -0.35
AC009560.1-201ENST00000620208 TIMP4Q99727 224 aa12.89□□□□□ -0.35
AC009560.1-201ENST00000620208 DUSP26Q9BV47 211 aa12.89□□□□□ -0.35
AC009560.1-201ENST00000620208 OSBPL11Q9BXB4 747 aa12.89□□□□□ -0.35
AC009560.1-201ENST00000620208 METTL7AQ9H8H3 244 aa12.89□□□□□ -0.35
AC009560.1-201ENST00000620208 Q9N2J8 555 aa12.89□□□□□ -0.35
AC009560.1-201ENST00000620208 SPRR3Q9UBC9 169 aa12.89□□□□□ -0.35
AC009560.1-201ENST00000620208 B4GALT7Q9UBV7 327 aa12.89□□□□□ -0.35
AC009560.1-201ENST00000620208 MRTO4Q9UKD2 239 aaKnown RBP12.89□□□□□ -0.35
AC009560.1-201ENST00000620208 CELSR2Q9HCU4 2923 aa12.89□□□□□ -0.35
AC009560.1-201ENST00000620208 DIDO1Q9BTC0 2240 aaKnown RBP12.88□□□□□ -0.35
AC009560.1-201ENST00000620208 CYSRT1A8MQ03 144 aa12.88□□□□□ -0.35
AC009560.1-201ENST00000620208 RNASET2O00584 256 aaKnown RBP12.88□□□□□ -0.35
AC009560.1-201ENST00000620208 IGKV1D-16P01601 117 aa12.88□□□□□ -0.35
AC009560.1-201ENST00000620208 TPOP07202 933 aa12.88□□□□□ -0.35
AC009560.1-201ENST00000620208 NGFRP08138 427 aa12.88□□□□□ -0.35
AC009560.1-201ENST00000620208 GPC1P35052 558 aa12.88□□□□□ -0.35
AC009560.1-201ENST00000620208 KRT20P35900 424 aa12.88□□□□□ -0.35
AC009560.1-201ENST00000620208 SMSP52788 366 aa12.88□□□□□ -0.35
AC009560.1-201ENST00000620208 ZNHIT3Q15649 155 aaPredicted RBP12.88□□□□□ -0.35
AC009560.1-201ENST00000620208 VPS26BQ4G0F5 336 aa12.88□□□□□ -0.35
AC009560.1-201ENST00000620208 TTMPQ5BVD1 217 aa12.88□□□□□ -0.35
AC009560.1-201ENST00000620208 ANGPTL8Q6UXH0 198 aa12.88□□□□□ -0.35
AC009560.1-201ENST00000620208 CD163Q86VB7 1156 aa12.88□□□□□ -0.35
AC009560.1-201ENST00000620208 SLC16A11Q8NCK7 471 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms