RNA–Protein interactions for RNA: ENST00000618944.4

TP53-223, Transcript of tumor protein p53, human

TSL 1 (best) BASIC

Gene TP53, Length 2,404 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TP53-223	ENST00000618944	POU2F3	Q9UKI9	436 aa		10.5	□□□□□ -0.73
TP53-223	ENST00000618944	COLEC10	Q9Y6Z7	277 aa		10.5	□□□□□ -0.73
TP53-223	ENST00000618944	PRSS38	A1L453	326 aa		10.49	□□□□□ -0.73
TP53-223	ENST00000618944	HYKK	A2RU49	373 aa		10.49	□□□□□ -0.73
TP53-223	ENST00000618944	HTR3E	A5X5Y0	456 aa		10.49	□□□□□ -0.73
TP53-223	ENST00000618944	ZNF670-ZNF695	F2Z2N8	137 aa		10.49	□□□□□ -0.73
TP53-223	ENST00000618944	CASC3	O15234	703 aa	Known RBP	10.49	□□□□□ -0.73
TP53-223	ENST00000618944	PTTG1	O95997	202 aa		10.49	□□□□□ -0.73
TP53-223	ENST00000618944	GSTT2	P0CG29	244 aa		10.49	□□□□□ -0.73
TP53-223	ENST00000618944	GSTT2B	P0CG30	244 aa		10.49	□□□□□ -0.73
TP53-223	ENST00000618944	ACADM	P11310	421 aa		10.49	□□□□□ -0.73
TP53-223	ENST00000618944	KIR2DL1	P43626	348 aa	Predicted RBP	10.49	□□□□□ -0.73
TP53-223	ENST00000618944	GAS1	P54826	345 aa		10.49	□□□□□ -0.73
TP53-223	ENST00000618944	ADPRH	P54922	357 aa		10.49	□□□□□ -0.73
TP53-223	ENST00000618944	STXBP1	P61764	594 aa	Known RBP	10.49	□□□□□ -0.73
TP53-223	ENST00000618944	RPS25	P62851	125 aa	Known RBP	10.49	□□□□□ -0.73
TP53-223	ENST00000618944	ENPP2	Q13822	863 aa		10.49	□□□□□ -0.73
TP53-223	ENST00000618944	TRAM2	Q15035	370 aa		10.49	□□□□□ -0.73
TP53-223	ENST00000618944	NDUFA9	Q16795	377 aa		10.49	□□□□□ -0.73
TP53-223	ENST00000618944	DEFB134	Q4QY38	66 aa		10.49	□□□□□ -0.73
TP53-223	ENST00000618944	TMEM31	Q5JXX7	168 aa		10.49	□□□□□ -0.73
TP53-223	ENST00000618944	CCNJ	Q5T5M9	372 aa		10.49	□□□□□ -0.73
TP53-223	ENST00000618944	SLC30A6	Q6NXT4	461 aa		10.49	□□□□□ -0.73
TP53-223	ENST00000618944	TMPRSS11A	Q6ZMR5	421 aa		10.49	□□□□□ -0.73
TP53-223	ENST00000618944	VN1R4	Q7Z5H5	301 aa		10.49	□□□□□ -0.73
TP53-223	ENST00000618944	AKAP14	Q86UN6	197 aa		10.49	□□□□□ -0.73
TP53-223	ENST00000618944	NRROS	Q86YC3	692 aa		10.49	□□□□□ -0.73
TP53-223	ENST00000618944	ANKK1	Q8NFD2	765 aa		10.49	□□□□□ -0.73
TP53-223	ENST00000618944	OR52P1P	Q8NH57	321 aa		10.49	□□□□□ -0.73
TP53-223	ENST00000618944	TMEM163	Q8TC26	289 aa		10.49	□□□□□ -0.73
TP53-223	ENST00000618944	TM9SF4	Q92544	642 aa		10.49	□□□□□ -0.73
TP53-223	ENST00000618944	CDS1	Q92903	461 aa		10.49	□□□□□ -0.73
TP53-223	ENST00000618944	TMEM74B	Q9NUR3	256 aa		10.49	□□□□□ -0.73
TP53-223	ENST00000618944	SNX7	Q9UNH6	387 aa		10.49	□□□□□ -0.73
TP53-223	ENST00000618944	SCN3A	Q9NY46	2000 aa		10.49	□□□□□ -0.73
TP53-223	ENST00000618944		A0A075B6Q4	140 aa		10.49	□□□□□ -0.73
TP53-223	ENST00000618944	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		10.49	□□□□□ -0.73
TP53-223	ENST00000618944	PRR19	A6NJB7	356 aa		10.49	□□□□□ -0.73
TP53-223	ENST00000618944	PLRG1	O43660	514 aa	Known RBP	10.49	□□□□□ -0.73
TP53-223	ENST00000618944	PIP5K1C	O60331	668 aa		10.49	□□□□□ -0.73
TP53-223	ENST00000618944	SLC2A10	O95528	541 aa		10.49	□□□□□ -0.73
TP53-223	ENST00000618944	APOA1	P02647	267 aa		10.49	□□□□□ -0.73
TP53-223	ENST00000618944	THY1	P04216	161 aa		10.49	□□□□□ -0.73
TP53-223	ENST00000618944	NR2F6	P10588	404 aa		10.49	□□□□□ -0.73
TP53-223	ENST00000618944	GSTM3	P21266	225 aa		10.49	□□□□□ -0.73
TP53-223	ENST00000618944	ETV6	P41212	452 aa		10.49	□□□□□ -0.73
TP53-223	ENST00000618944	CAV3	P56539	151 aa		10.49	□□□□□ -0.73
TP53-223	ENST00000618944	DEFA1	P59665	94 aa		10.49	□□□□□ -0.73
TP53-223	ENST00000618944	DEFA3	P59666	94 aa		10.49	□□□□□ -0.73
TP53-223	ENST00000618944	RUNX1T1	Q06455	604 aa		10.49	□□□□□ -0.73
TP53-223	ENST00000618944	HNRNPA0	Q13151	305 aa	Known RBP	10.49	□□□□□ -0.73
TP53-223	ENST00000618944	KCNJ8	Q15842	424 aa		10.49	□□□□□ -0.73
TP53-223	ENST00000618944	BAK1	Q16611	211 aa		10.49	□□□□□ -0.73
TP53-223	ENST00000618944	KLHL22	Q53GT1	634 aa		10.49	□□□□□ -0.73
TP53-223	ENST00000618944	TMEM196	Q5HYL7	178 aa		10.49	□□□□□ -0.73
TP53-223	ENST00000618944	TYW3	Q6IPR3	259 aa	Known RBP	10.49	□□□□□ -0.73
TP53-223	ENST00000618944	ZNF425	Q6IV72	752 aa		10.49	□□□□□ -0.73
TP53-223	ENST00000618944	FBXO42	Q6P3S6	717 aa		10.49	□□□□□ -0.73
TP53-223	ENST00000618944	B3GLCT	Q6Y288	498 aa		10.49	□□□□□ -0.73
TP53-223	ENST00000618944	SLC36A4	Q6YBV0	504 aa		10.49	□□□□□ -0.73
TP53-223	ENST00000618944	LAPTM4B	Q86VI4	370 aa		10.49	□□□□□ -0.73
TP53-223	ENST00000618944	LINC00471	Q8N535	108 aa		10.49	□□□□□ -0.73
TP53-223	ENST00000618944	SYT14	Q8NB59	555 aa		10.49	□□□□□ -0.73
TP53-223	ENST00000618944	SRFBP1	Q8NEF9	429 aa	Known RBP	10.49	□□□□□ -0.73
TP53-223	ENST00000618944	TMEM255B	Q8WV15	326 aa		10.49	□□□□□ -0.73
TP53-223	ENST00000618944	OR1E3	Q8WZA6	343 aa		10.49	□□□□□ -0.73
TP53-223	ENST00000618944	FGF11	Q92914	225 aa		10.49	□□□□□ -0.73
TP53-223	ENST00000618944	ARSG	Q96EG1	525 aa		10.49	□□□□□ -0.73
TP53-223	ENST00000618944	GIMAP5	Q96F15	307 aa		10.49	□□□□□ -0.73
TP53-223	ENST00000618944	NEDD4L	Q96PU5	975 aa		10.49	□□□□□ -0.73
TP53-223	ENST00000618944	MCHR1	Q99705	422 aa		10.49	□□□□□ -0.73
TP53-223	ENST00000618944	RMI1	Q9H9A7	625 aa		10.49	□□□□□ -0.73
TP53-223	ENST00000618944	ABCB9	Q9NP78	766 aa		10.49	□□□□□ -0.73
TP53-223	ENST00000618944	ZNF624	Q9P2J8	865 aa	Predicted RBP	10.49	□□□□□ -0.73
TP53-223	ENST00000618944	YBX2	Q9Y2T7	364 aa	Known RBP	10.49	□□□□□ -0.73
TP53-223	ENST00000618944	EYS	Q5T1H1	3165 aa		10.49	□□□□□ -0.73
TP53-223	ENST00000618944	ZNF860	A6NHJ4	632 aa		10.48	□□□□□ -0.73
TP53-223	ENST00000618944		H3BQ06	376 aa	Predicted RBP	10.48	□□□□□ -0.73
TP53-223	ENST00000618944	MSL3P1	P0C860	447 aa		10.48	□□□□□ -0.73
TP53-223	ENST00000618944	CPE	P16870	476 aa		10.48	□□□□□ -0.73
TP53-223	ENST00000618944	COL9A1	P20849	921 aa		10.48	□□□□□ -0.73
TP53-223	ENST00000618944	ENDOU	P21128	410 aa	Known RBP	10.48	□□□□□ -0.73
TP53-223	ENST00000618944	CPN2	P22792	545 aa		10.48	□□□□□ -0.73
TP53-223	ENST00000618944	TEAD1	P28347	426 aa		10.48	□□□□□ -0.73
TP53-223	ENST00000618944	SDC2	P34741	201 aa		10.48	□□□□□ -0.73
TP53-223	ENST00000618944	RCVRN	P35243	200 aa		10.48	□□□□□ -0.73
TP53-223	ENST00000618944	OMP	P47874	163 aa		10.48	□□□□□ -0.73
TP53-223	ENST00000618944	MTNR1A	P48039	350 aa		10.48	□□□□□ -0.73
TP53-223	ENST00000618944	RGS8	P57771	180 aa	Predicted RBP	10.48	□□□□□ -0.73
TP53-223	ENST00000618944	ERVK-21	P61565	698 aa		10.48	□□□□□ -0.73
TP53-223	ENST00000618944	ST3GAL3	Q11203	375 aa		10.48	□□□□□ -0.73
TP53-223	ENST00000618944	TSPAN31	Q12999	210 aa		10.48	□□□□□ -0.73
TP53-223	ENST00000618944	LARS2	Q15031	903 aa	Known RBP	10.48	□□□□□ -0.73
TP53-223	ENST00000618944	TAB1	Q15750	504 aa		10.48	□□□□□ -0.73
TP53-223	ENST00000618944	CRTC2	Q53ET0	693 aa	Predicted RBP	10.48	□□□□□ -0.73
TP53-223	ENST00000618944	GDPGP1	Q6ZNW5	385 aa		10.48	□□□□□ -0.73
TP53-223	ENST00000618944	PLEKHM3	Q6ZWE6	761 aa		10.48	□□□□□ -0.73
TP53-223	ENST00000618944	NRM	Q8IXM6	262 aa		10.48	□□□□□ -0.73
TP53-223	ENST00000618944	CAMKK1	Q8N5S9	505 aa		10.48	□□□□□ -0.73
TP53-223	ENST00000618944	FLCN	Q8NFG4	579 aa		10.48	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms