RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-220ENST00000618606 ANKRD30BLA7E2S9 258 aa1.88□□□□□ -2.11
TARDBP-220ENST00000618606 A8MU76 341 aa1.88□□□□□ -2.11
TARDBP-220ENST00000618606 LGALS8O00214 317 aa1.88□□□□□ -2.11
TARDBP-220ENST00000618606 SDHDO14521 159 aa1.88□□□□□ -2.11
TARDBP-220ENST00000618606 XPO1O14980 1071 aaKnown RBP1.88□□□□□ -2.11
TARDBP-220ENST00000618606 MCF2LO15068 1137 aa1.88□□□□□ -2.11
TARDBP-220ENST00000618606 CSO75390 466 aaKnown RBP1.88□□□□□ -2.11
TARDBP-220ENST00000618606 MTX2O75431 263 aa1.88□□□□□ -2.11
TARDBP-220ENST00000618606 TOM1L1O75674 476 aa1.88□□□□□ -2.11
TARDBP-220ENST00000618606 PIGRP01833 764 aa1.88□□□□□ -2.11
TARDBP-220ENST00000618606 LYNP07948 512 aa1.88□□□□□ -2.11
TARDBP-220ENST00000618606 GSTA2P09210 222 aa1.88□□□□□ -2.11
TARDBP-220ENST00000618606 IQCF3P0C7M6 154 aa1.88□□□□□ -2.11
TARDBP-220ENST00000618606 THRBP10828 461 aa1.88□□□□□ -2.11
TARDBP-220ENST00000618606 RALAP11233 206 aa1.88□□□□□ -2.11
TARDBP-220ENST00000618606 CD1DP15813 335 aa1.88□□□□□ -2.11
TARDBP-220ENST00000618606 ATP6V1C1P21283 382 aa1.88□□□□□ -2.11
TARDBP-220ENST00000618606 TMOD1P28289 359 aa1.88□□□□□ -2.11
TARDBP-220ENST00000618606 TRIM23P36406 574 aa1.88□□□□□ -2.11
TARDBP-220ENST00000618606 TAGLN2P37802 199 aaKnown RBP1.88□□□□□ -2.11
TARDBP-220ENST00000618606 FEN1P39748 380 aaKnown RBP1.88□□□□□ -2.11
TARDBP-220ENST00000618606 ACADSBP45954 432 aa1.88□□□□□ -2.11
TARDBP-220ENST00000618606 SLC6A8P48029 635 aa1.88□□□□□ -2.11
TARDBP-220ENST00000618606 SLC1A6P48664 564 aa1.88□□□□□ -2.11
TARDBP-220ENST00000618606 DHPSP49366 369 aaPredicted RBP1.88□□□□□ -2.11
TARDBP-220ENST00000618606 CCR4P51679 360 aa1.88□□□□□ -2.11
TARDBP-220ENST00000618606 UCNP55089 124 aa1.88□□□□□ -2.11
TARDBP-220ENST00000618606 CNTN2Q02246 1040 aa1.88□□□□□ -2.11
TARDBP-220ENST00000618606 GABPAQ06546 454 aa1.88□□□□□ -2.11
TARDBP-220ENST00000618606 MFGE8Q08431 387 aaPredicted RBP1.88□□□□□ -2.11
TARDBP-220ENST00000618606 IL24Q13007 206 aa1.88□□□□□ -2.11
TARDBP-220ENST00000618606 GCKRQ14397 625 aa1.88□□□□□ -2.11
TARDBP-220ENST00000618606 CCDC152Q4G0S7 254 aa1.88□□□□□ -2.11
TARDBP-220ENST00000618606 SLC22A6Q4U2R8 563 aa1.88□□□□□ -2.11
TARDBP-220ENST00000618606 CEP55Q53EZ4 464 aa1.88□□□□□ -2.11
TARDBP-220ENST00000618606 MPPE1Q53F39 396 aa1.88□□□□□ -2.11
TARDBP-220ENST00000618606 TMEM41BQ5BJD5 291 aa1.88□□□□□ -2.11
TARDBP-220ENST00000618606 VWA2Q5GFL6 755 aa1.88□□□□□ -2.11
TARDBP-220ENST00000618606 PLPP4Q5VZY2 271 aa1.88□□□□□ -2.11
TARDBP-220ENST00000618606 NCR3LG1Q68D85 454 aa1.88□□□□□ -2.11
TARDBP-220ENST00000618606 TCEAL6Q6IPX3 200 aa1.88□□□□□ -2.11
TARDBP-220ENST00000618606 ZNF600Q6ZNG1 722 aa1.88□□□□□ -2.11
TARDBP-220ENST00000618606 Q71RC1 249 aaPredicted RBP1.88□□□□□ -2.11
TARDBP-220ENST00000618606 ZDHHC21Q8IVQ6 265 aa1.88□□□□□ -2.11
TARDBP-220ENST00000618606 FAM133AQ8N9E0 248 aa1.88□□□□□ -2.11
TARDBP-220ENST00000618606 FADS6Q8N9I5 356 aa1.88□□□□□ -2.11
TARDBP-220ENST00000618606 ZNF397Q8NF99 534 aaPredicted RBP1.88□□□□□ -2.11
TARDBP-220ENST00000618606 GTSF1Q8WW33 167 aa1.88□□□□□ -2.11
TARDBP-220ENST00000618606 MRPL24Q96A35 216 aaKnown RBP1.88□□□□□ -2.11
TARDBP-220ENST00000618606 CNDP1Q96KN2 507 aa1.88□□□□□ -2.11
TARDBP-220ENST00000618606 ALKBH3Q96Q83 286 aaPredicted RBP1.88□□□□□ -2.11
TARDBP-220ENST00000618606 PCDHB18PQ96TA0 734 aa1.88□□□□□ -2.11
TARDBP-220ENST00000618606 CCM2Q9BSQ5 444 aa1.88□□□□□ -2.11
TARDBP-220ENST00000618606 DEFB126Q9BYW3 111 aa1.88□□□□□ -2.11
TARDBP-220ENST00000618606 RMND5AQ9H871 391 aa1.88□□□□□ -2.11
TARDBP-220ENST00000618606 SLC25A19Q9HC21 320 aa1.88□□□□□ -2.11
TARDBP-220ENST00000618606 GDF3Q9NR23 364 aa1.88□□□□□ -2.11
TARDBP-220ENST00000618606 SDAD1Q9NVU7 687 aaKnown RBP eCLIP1.88□□□□□ -2.11
TARDBP-220ENST00000618606 VPS54Q9P1Q0 977 aa1.88□□□□□ -2.11
TARDBP-220ENST00000618606 ERVK-18Q9QC07 812 aa1.88□□□□□ -2.11
TARDBP-220ENST00000618606 P2RX2Q9UBL9 471 aa1.88□□□□□ -2.11
TARDBP-220ENST00000618606 LHX3Q9UBR4 397 aa1.88□□□□□ -2.11
TARDBP-220ENST00000618606 MIOXQ9UGB7 285 aa1.88□□□□□ -2.11
TARDBP-220ENST00000618606 TEKT2Q9UIF3 430 aa1.88□□□□□ -2.11
TARDBP-220ENST00000618606 CLEC4EQ9ULY5 219 aa1.88□□□□□ -2.11
TARDBP-220ENST00000618606 KIF3AQ9Y496 699 aa1.88□□□□□ -2.11
TARDBP-220ENST00000618606 ASB3Q9Y575 518 aa1.88□□□□□ -2.11
TARDBP-220ENST00000618606 CLRN2A0PK11 232 aa1.87□□□□□ -2.11
TARDBP-220ENST00000618606 RNF222A6NCQ9 220 aa1.87□□□□□ -2.11
TARDBP-220ENST00000618606 YJEFN3A6XGL0 299 aa1.87□□□□□ -2.11
TARDBP-220ENST00000618606 H3BMH7 237 aa1.87□□□□□ -2.11
TARDBP-220ENST00000618606 SH2D1BO14796 132 aa1.87□□□□□ -2.11
TARDBP-220ENST00000618606 CSDE1O75534 798 aaKnown RBP1.87□□□□□ -2.11
TARDBP-220ENST00000618606 SPAG6O75602 509 aa1.87□□□□□ -2.11
TARDBP-220ENST00000618606 ANXA9O76027 345 aa1.87□□□□□ -2.11
TARDBP-220ENST00000618606 TM7SF2O76062 418 aa1.87□□□□□ -2.11
TARDBP-220ENST00000618606 OR4F21O95013 312 aa1.87□□□□□ -2.11
TARDBP-220ENST00000618606 GOT2P00505 430 aaKnown RBP1.87□□□□□ -2.11
TARDBP-220ENST00000618606 KRT8P05787 483 aa1.87□□□□□ -2.11
TARDBP-220ENST00000618606 ASNSP08243 561 aa1.87□□□□□ -2.11
TARDBP-220ENST00000618606 HIST1H2AGP0C0S8 130 aaPredicted RBP1.87□□□□□ -2.11
TARDBP-220ENST00000618606 TSPAN8P19075 237 aa1.87□□□□□ -2.11
TARDBP-220ENST00000618606 GLRA2P23416 452 aa1.87□□□□□ -2.11
TARDBP-220ENST00000618606 CA8P35219 290 aa1.87□□□□□ -2.11
TARDBP-220ENST00000618606 SPRP35270 261 aaPredicted RBP1.87□□□□□ -2.11
TARDBP-220ENST00000618606 ID1P41134 155 aa1.87□□□□□ -2.11
TARDBP-220ENST00000618606 PTGFRP43088 359 aa1.87□□□□□ -2.11
TARDBP-220ENST00000618606 MTIF2P46199 727 aaKnown RBP1.87□□□□□ -2.11
TARDBP-220ENST00000618606 RPS4XP62701 263 aaKnown RBP1.87□□□□□ -2.11
TARDBP-220ENST00000618606 NUCB2P80303 420 aa1.87□□□□□ -2.11
TARDBP-220ENST00000618606 HSPA14Q0VDF9 509 aa1.87□□□□□ -2.11
TARDBP-220ENST00000618606 GPM6BQ13491 265 aa1.87□□□□□ -2.11
TARDBP-220ENST00000618606 KLF5Q13887 457 aaPredicted RBP1.87□□□□□ -2.11
TARDBP-220ENST00000618606 MEF2DQ14814 521 aa1.87□□□□□ -2.11
TARDBP-220ENST00000618606 P2RY14Q15391 338 aa1.87□□□□□ -2.11
TARDBP-220ENST00000618606 TRIP10Q15642 601 aa1.87□□□□□ -2.11
TARDBP-220ENST00000618606 ANKRD55Q3KP44 614 aa1.87□□□□□ -2.11
TARDBP-220ENST00000618606 SLC36A3Q495N2 470 aa1.87□□□□□ -2.11
TARDBP-220ENST00000618606 BOLA3Q53S33 107 aa1.87□□□□□ -2.11
TARDBP-220ENST00000618606 RABGAP1LQ5R372 815 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms