RNA–Protein interactions for RNA: ENST00000618056.4

PMS1-220, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-220ENST00000618056 ADAM10O14672 748 aa22.77■■□□□ 1.24
PMS1-220ENST00000618056 G6PDP11413 515 aa22.77■■□□□ 1.24
PMS1-220ENST00000618056 ELAVL4P26378 380 aaKnown RBP22.77■■□□□ 1.24
PMS1-220ENST00000618056 MASP1P48740 699 aa22.77■■□□□ 1.24
PMS1-220ENST00000618056 ZNHIT3Q15649 155 aaPredicted RBP22.77■■□□□ 1.24
PMS1-220ENST00000618056 CPTPQ5TA50 214 aa22.77■■□□□ 1.24
PMS1-220ENST00000618056 ATG16L1Q676U5 607 aa22.77■■□□□ 1.24
PMS1-220ENST00000618056 TIGD3Q6B0B8 471 aa22.77■■□□□ 1.24
PMS1-220ENST00000618056 LARP4Q71RC2 724 aaKnown RBP eCLIP22.77■■□□□ 1.24
PMS1-220ENST00000618056 TRIM42Q8IWZ5 723 aa22.77■■□□□ 1.24
PMS1-220ENST00000618056 OR4N2Q8NGD1 307 aa22.77■■□□□ 1.24
PMS1-220ENST00000618056 CEP70Q8NHQ1 597 aa22.77■■□□□ 1.24
PMS1-220ENST00000618056 PHF10Q8WUB8 498 aaKnown RBP22.77■■□□□ 1.24
PMS1-220ENST00000618056 RNF138Q8WVD3 245 aa22.77■■□□□ 1.24
PMS1-220ENST00000618056 ARL8AQ96BM9 186 aa22.77■■□□□ 1.24
PMS1-220ENST00000618056 PPP1R36Q96LQ0 422 aa22.77■■□□□ 1.24
PMS1-220ENST00000618056 DMRTA2Q96SC8 542 aa22.77■■□□□ 1.24
PMS1-220ENST00000618056 PRPF18Q99633 342 aaKnown RBP22.77■■□□□ 1.24
PMS1-220ENST00000618056 NUF2Q9BZD4 464 aa22.77■■□□□ 1.24
PMS1-220ENST00000618056 LDAHQ9H6V9 325 aa22.77■■□□□ 1.24
PMS1-220ENST00000618056 MEAF6Q9HAF1 191 aa22.77■■□□□ 1.24
PMS1-220ENST00000618056 PNPOQ9NVS9 261 aa22.77■■□□□ 1.24
PMS1-220ENST00000618056 C15orf41Q9Y2V0 281 aa22.77■■□□□ 1.24
PMS1-220ENST00000618056 ARHGAP21Q5T5U3 1957 aa22.76■■□□□ 1.23
PMS1-220ENST00000618056 TRGV5A0A0B4J1U4 118 aa22.76■■□□□ 1.23
PMS1-220ENST00000618056 BCKDKO14874 412 aa22.76■■□□□ 1.23
PMS1-220ENST00000618056 ICOSLGO75144 302 aa22.76■■□□□ 1.23
PMS1-220ENST00000618056 LAMP1P11279 417 aa22.76■■□□□ 1.23
PMS1-220ENST00000618056 GDF1P27539 372 aa22.76■■□□□ 1.23
PMS1-220ENST00000618056 IL12BP29460 328 aa22.76■■□□□ 1.23
PMS1-220ENST00000618056 MAN2A2P49641 1150 aa22.76■■□□□ 1.23
PMS1-220ENST00000618056 CDK9P50750 372 aaKnown RBP22.76■■□□□ 1.23
PMS1-220ENST00000618056 CLDN8P56748 225 aa22.76■■□□□ 1.23
PMS1-220ENST00000618056 MRPS22P82650 360 aaKnown RBP22.76■■□□□ 1.23
PMS1-220ENST00000618056 EMC4Q5J8M3 183 aa22.76■■□□□ 1.23
PMS1-220ENST00000618056 ZNF808Q8N4W9 903 aaPredicted RBP22.76■■□□□ 1.23
PMS1-220ENST00000618056 KRTCAP2Q8N6L1 136 aa22.76■■□□□ 1.23
PMS1-220ENST00000618056 TP63Q9H3D4 680 aaPredicted RBP22.76■■□□□ 1.23
PMS1-220ENST00000618056 C3orf14Q9HBI5 128 aa22.76■■□□□ 1.23
PMS1-220ENST00000618056 Q9N2J8 555 aa22.76■■□□□ 1.23
PMS1-220ENST00000618056 KLRF1Q9NZS2 232 aa22.76■■□□□ 1.23
PMS1-220ENST00000618056 MAPRE3Q9UPY8 281 aa22.76■■□□□ 1.23
PMS1-220ENST00000618056 HRH3Q9Y5N1 445 aa22.76■■□□□ 1.23
PMS1-220ENST00000618056 GIMAP1-GIMAP5A0A087WTJ2 511 aa22.75■■□□□ 1.23
PMS1-220ENST00000618056 NPIPA2E9PIF3 369 aa22.75■■□□□ 1.23
PMS1-220ENST00000618056 NPIPA3F8WFD2 350 aa22.75■■□□□ 1.23
PMS1-220ENST00000618056 MAP3K8P41279 467 aa22.75■■□□□ 1.23
PMS1-220ENST00000618056 CBX1P83916 185 aa22.75■■□□□ 1.23
PMS1-220ENST00000618056 ADORA2A-AS1P86434 159 aa22.75■■□□□ 1.23
PMS1-220ENST00000618056 GAB1Q13480 694 aa22.75■■□□□ 1.23
PMS1-220ENST00000618056 HSP90B2PQ58FF3 399 aa22.75■■□□□ 1.23
PMS1-220ENST00000618056 CAMKMTQ7Z624 323 aa22.75■■□□□ 1.23
PMS1-220ENST00000618056 MRGPRGQ86SM5 289 aa22.75■■□□□ 1.23
PMS1-220ENST00000618056 NUP43Q8NFH3 380 aa22.75■■□□□ 1.23
PMS1-220ENST00000618056 SARAFQ96BY9 339 aa22.75■■□□□ 1.23
PMS1-220ENST00000618056 GIMAP5Q96F15 307 aa22.75■■□□□ 1.23
PMS1-220ENST00000618056 GNRHR2Q96P88 292 aa22.75■■□□□ 1.23
PMS1-220ENST00000618056 MS4A4EQ96PG1 132 aa22.75■■□□□ 1.23
PMS1-220ENST00000618056 CBLCQ9ULV8 474 aa22.75■■□□□ 1.23
PMS1-220ENST00000618056 CELSR2Q9HCU4 2923 aa22.75■■□□□ 1.23
PMS1-220ENST00000618056 PCNX3Q9H6A9 2034 aa22.74■■□□□ 1.23
PMS1-220ENST00000618056 A0A1W2PRB8 838 aa22.74■■□□□ 1.23
PMS1-220ENST00000618056 SNPHO15079 494 aa22.74■■□□□ 1.23
PMS1-220ENST00000618056 HPNP05981 417 aa22.74■■□□□ 1.23
PMS1-220ENST00000618056 AGAP20933 346 aa22.74■■□□□ 1.23
PMS1-220ENST00000618056 ENDOUP21128 410 aaKnown RBP22.74■■□□□ 1.23
PMS1-220ENST00000618056 PTPN6P29350 595 aa22.74■■□□□ 1.23
PMS1-220ENST00000618056 DECR1Q16698 335 aa22.74■■□□□ 1.23
PMS1-220ENST00000618056 ANGPTL8Q6UXH0 198 aa22.74■■□□□ 1.23
PMS1-220ENST00000618056 C3P1Q6ZMU1 363 aa22.74■■□□□ 1.23
PMS1-220ENST00000618056 OR1J4Q8NGS1 313 aa22.74■■□□□ 1.23
PMS1-220ENST00000618056 PSMA8Q8TAA3 256 aa22.74■■□□□ 1.23
PMS1-220ENST00000618056 EFHD2Q96C19 240 aaPredicted RBP22.74■■□□□ 1.23
PMS1-220ENST00000618056 ATP6V1G3Q96LB4 118 aa22.74■■□□□ 1.23
PMS1-220ENST00000618056 BHLHE41Q9C0J9 482 aaPredicted RBP22.74■■□□□ 1.23
PMS1-220ENST00000618056 MANSC1Q9H8J5 431 aa22.74■■□□□ 1.23
PMS1-220ENST00000618056 GALNT9Q9HCQ5 603 aa22.74■■□□□ 1.23
PMS1-220ENST00000618056 SIRT3Q9NTG7 399 aaPredicted RBP22.74■■□□□ 1.23
PMS1-220ENST00000618056 ADGRG4Q8IZF6 3080 aa22.74■■□□□ 1.23
PMS1-220ENST00000618056 MAST4O15021 2626 aa22.74■■□□□ 1.23
PMS1-220ENST00000618056 KLF11O14901 512 aa22.73■■□□□ 1.23
PMS1-220ENST00000618056 EMC8O43402 210 aa22.73■■□□□ 1.23
PMS1-220ENST00000618056 EFNA1P20827 205 aaPredicted RBP22.73■■□□□ 1.23
PMS1-220ENST00000618056 SMSP52788 366 aa22.73■■□□□ 1.23
PMS1-220ENST00000618056 DIO3P55073 304 aa22.73■■□□□ 1.23
PMS1-220ENST00000618056 OCRLQ01968 901 aa22.73■■□□□ 1.23
PMS1-220ENST00000618056 VPS26BQ4G0F5 336 aa22.73■■□□□ 1.23
PMS1-220ENST00000618056 GXYLT1Q4G148 440 aa22.73■■□□□ 1.23
PMS1-220ENST00000618056 OGFOD2Q6N063 350 aa22.73■■□□□ 1.23
PMS1-220ENST00000618056 XKRXQ6PP77 449 aa22.73■■□□□ 1.23
PMS1-220ENST00000618056 WDR53Q7Z5U6 358 aaPredicted RBP22.73■■□□□ 1.23
PMS1-220ENST00000618056 CDRT4Q8N9R6 151 aa22.73■■□□□ 1.23
PMS1-220ENST00000618056 NEIL3Q8TAT5 605 aa22.73■■□□□ 1.23
PMS1-220ENST00000618056 OR5P2Q8WZ92 322 aa22.73■■□□□ 1.23
PMS1-220ENST00000618056 SLC6A15Q9H2J7 730 aa22.73■■□□□ 1.23
PMS1-220ENST00000618056 EXO5Q9H790 373 aa22.73■■□□□ 1.23
PMS1-220ENST00000618056 MED4Q9NPJ6 270 aa22.73■■□□□ 1.23
PMS1-220ENST00000618056 EQTNQ9NQ60 294 aa22.73■■□□□ 1.23
PMS1-220ENST00000618056 MRTO4Q9UKD2 239 aaKnown RBP22.73■■□□□ 1.23
PMS1-220ENST00000618056 GNB5O14775 395 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms