RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 TDGF1P13385 188 aa7.26□□□□□ -1.25
NEK3-207ENST00000617054 RHCEP18577 417 aa7.26□□□□□ -1.25
NEK3-207ENST00000617054 RELAQ04206 551 aa7.26□□□□□ -1.25
NEK3-207ENST00000617054 APOFQ13790 326 aa7.26□□□□□ -1.25
NEK3-207ENST00000617054 NPTX1Q15818 432 aa7.26□□□□□ -1.25
NEK3-207ENST00000617054 FAM214AQ32MH5 1076 aa7.26□□□□□ -1.25
NEK3-207ENST00000617054 MANEAQ5SRI9 462 aa7.26□□□□□ -1.25
NEK3-207ENST00000617054 ATAD3BQ5T9A4 648 aa7.26□□□□□ -1.25
NEK3-207ENST00000617054 FHL5Q5TD97 284 aa7.26□□□□□ -1.25
NEK3-207ENST00000617054 TTC23Q5W5X9 447 aa7.26□□□□□ -1.25
NEK3-207ENST00000617054 FRRS1Q6ZNA5 592 aa7.26□□□□□ -1.25
NEK3-207ENST00000617054 KRT73Q86Y46 540 aa7.26□□□□□ -1.25
NEK3-207ENST00000617054 CHDHQ8NE62 594 aaPredicted RBP7.26□□□□□ -1.25
NEK3-207ENST00000617054 OR52P1PQ8NH57 321 aa7.26□□□□□ -1.25
NEK3-207ENST00000617054 RNF217Q8TC41 542 aa7.26□□□□□ -1.25
NEK3-207ENST00000617054 SFXN5Q8TD22 340 aa7.26□□□□□ -1.25
NEK3-207ENST00000617054 EDAQ92838 391 aa7.26□□□□□ -1.25
NEK3-207ENST00000617054 RIT1Q92963 219 aa7.26□□□□□ -1.25
NEK3-207ENST00000617054 MS4A4EQ96PG1 132 aa7.26□□□□□ -1.25
NEK3-207ENST00000617054 LMF1Q96S06 567 aa7.26□□□□□ -1.25
NEK3-207ENST00000617054 SDF2Q99470 211 aa7.26□□□□□ -1.25
NEK3-207ENST00000617054 CCDC90BQ9GZT6 254 aa7.26□□□□□ -1.25
NEK3-207ENST00000617054 THSD1Q9NS62 852 aa7.26□□□□□ -1.25
NEK3-207ENST00000617054 PAK1IP1Q9NWT1 392 aaPredicted RBP7.26□□□□□ -1.25
NEK3-207ENST00000617054 A4GNTQ9UNA3 340 aa7.26□□□□□ -1.25
NEK3-207ENST00000617054 WDR45Q9Y484 360 aa7.26□□□□□ -1.25
NEK3-207ENST00000617054 CLDN16Q9Y5I7 305 aa7.26□□□□□ -1.25
NEK3-207ENST00000617054 CACNA1HO95180 2353 aa7.26□□□□□ -1.25
NEK3-207ENST00000617054 FER1L5A0AVI2 2057 aa7.26□□□□□ -1.25
NEK3-207ENST00000617054 A0A1W2PQM1 296 aa7.26□□□□□ -1.25
NEK3-207ENST00000617054 ZNF749O43361 778 aa7.26□□□□□ -1.25
NEK3-207ENST00000617054 DUX1O43812 170 aa7.26□□□□□ -1.25
NEK3-207ENST00000617054 DNAJB5O75953 348 aa7.26□□□□□ -1.25
NEK3-207ENST00000617054 PABPC4LP0CB38 370 aaKnown RBP7.26□□□□□ -1.25
NEK3-207ENST00000617054 PRG2P13727 222 aa7.26□□□□□ -1.25
NEK3-207ENST00000617054 EPHA8P29322 1005 aaPredicted RBP7.26□□□□□ -1.25
NEK3-207ENST00000617054 PEX19P40855 299 aa7.26□□□□□ -1.25
NEK3-207ENST00000617054 RPL5P46777 297 aaKnown RBP7.26□□□□□ -1.25
NEK3-207ENST00000617054 HSD11B2P80365 405 aa7.26□□□□□ -1.25
NEK3-207ENST00000617054 KCNC4Q03721 635 aa7.26□□□□□ -1.25
NEK3-207ENST00000617054 ZNF691Q5VV52 312 aa7.26□□□□□ -1.25
NEK3-207ENST00000617054 DESI1Q6ICB0 168 aa7.26□□□□□ -1.25
NEK3-207ENST00000617054 TYW3Q6IPR3 259 aaKnown RBP7.26□□□□□ -1.25
NEK3-207ENST00000617054 FAHD1Q6P587 224 aa7.26□□□□□ -1.25
NEK3-207ENST00000617054 ZNF605Q86T29 641 aa7.26□□□□□ -1.25
NEK3-207ENST00000617054 CACTIN-AS1Q8N1I8 211 aa7.26□□□□□ -1.25
NEK3-207ENST00000617054 VWA5B2Q8N398 1253 aa7.26□□□□□ -1.25
NEK3-207ENST00000617054 SAP25Q8TEE9 199 aa7.26□□□□□ -1.25
NEK3-207ENST00000617054 TANKQ92844 425 aa7.26□□□□□ -1.25
NEK3-207ENST00000617054 TSLPQ969D9 159 aa7.26□□□□□ -1.25
NEK3-207ENST00000617054 PTCHD1Q96NR3 888 aa7.26□□□□□ -1.25
NEK3-207ENST00000617054 ZNF347Q96SE7 839 aa7.26□□□□□ -1.25
NEK3-207ENST00000617054 MRPS26Q9BYN8 205 aaKnown RBP7.26□□□□□ -1.25
NEK3-207ENST00000617054 PRTFDC1Q9NRG1 225 aa7.26□□□□□ -1.25
NEK3-207ENST00000617054 PNO1Q9NRX1 252 aaKnown RBP7.26□□□□□ -1.25
NEK3-207ENST00000617054 CUTCQ9NTM9 273 aa7.26□□□□□ -1.25
NEK3-207ENST00000617054 C19orf53Q9UNZ5 99 aaPredicted RBP7.26□□□□□ -1.25
NEK3-207ENST00000617054 ERVK-19Q9WJR5 959 aa7.26□□□□□ -1.25
NEK3-207ENST00000617054 LY6G6EA0A0G2JKS1 128 aa7.25□□□□□ -1.25
NEK3-207ENST00000617054 TIAF1O95411 115 aa7.25□□□□□ -1.25
NEK3-207ENST00000617054 LGI1O95970 557 aa7.25□□□□□ -1.25
NEK3-207ENST00000617054 ALPPP05187 535 aa7.25□□□□□ -1.25
NEK3-207ENST00000617054 RNH1P13489 461 aaKnown RBP7.25□□□□□ -1.25
NEK3-207ENST00000617054 ITGA2P17301 1181 aa7.25□□□□□ -1.25
NEK3-207ENST00000617054 TNNI3P19429 210 aa7.25□□□□□ -1.25
NEK3-207ENST00000617054 S1PR1P21453 382 aa7.25□□□□□ -1.25
NEK3-207ENST00000617054 ELAVL4P26378 380 aaKnown RBP7.25□□□□□ -1.25
NEK3-207ENST00000617054 ST13P50502 369 aaKnown RBP7.25□□□□□ -1.25
NEK3-207ENST00000617054 NUDT6P53370 316 aa7.25□□□□□ -1.25
NEK3-207ENST00000617054 CCL7P80098 99 aa7.25□□□□□ -1.25
NEK3-207ENST00000617054 HPCAP84074 193 aa7.25□□□□□ -1.25
NEK3-207ENST00000617054 CDK5R2Q13319 367 aa7.25□□□□□ -1.25
NEK3-207ENST00000617054 PMS2P3Q13401 168 aa7.25□□□□□ -1.25
NEK3-207ENST00000617054 CCDC157Q569K6 752 aa7.25□□□□□ -1.25
NEK3-207ENST00000617054 TRIM61Q5EBN2 209 aa7.25□□□□□ -1.25
NEK3-207ENST00000617054 C6orf141Q5SZD1 244 aa7.25□□□□□ -1.25
NEK3-207ENST00000617054 PLXDC1Q8IUK5 500 aa7.25□□□□□ -1.25
NEK3-207ENST00000617054 COX18Q8N8Q8 333 aa7.25□□□□□ -1.25
NEK3-207ENST00000617054 SLC38A9Q8NBW4 561 aa7.25□□□□□ -1.25
NEK3-207ENST00000617054 GAB3Q8WWW8 586 aa7.25□□□□□ -1.25
NEK3-207ENST00000617054 GPA33Q99795 319 aa7.25□□□□□ -1.25
NEK3-207ENST00000617054 CXorf21Q9HAI6 301 aa7.25□□□□□ -1.25
NEK3-207ENST00000617054 PAPOLBQ9NRJ5 636 aaKnown RBP7.25□□□□□ -1.25
NEK3-207ENST00000617054 FGF21Q9NSA1 209 aa7.25□□□□□ -1.25
NEK3-207ENST00000617054 ZSCAN32Q9NX65 697 aa7.25□□□□□ -1.25
NEK3-207ENST00000617054 U3KQA8 63 aa7.25□□□□□ -1.25
NEK3-207ENST00000617054 A0A0G2JPF8 293 aa7.25□□□□□ -1.25
NEK3-207ENST00000617054 CDC14CA4D256 554 aa7.25□□□□□ -1.25
NEK3-207ENST00000617054 HNRNPCL2B2RXH8 293 aa7.25□□□□□ -1.25
NEK3-207ENST00000617054 HNRNPCL3B7ZW38 293 aa7.25□□□□□ -1.25
NEK3-207ENST00000617054 H3BMH7 237 aa7.25□□□□□ -1.25
NEK3-207ENST00000617054 PDE9AO76083 593 aa7.25□□□□□ -1.25
NEK3-207ENST00000617054 CCNB2O95067 398 aa7.25□□□□□ -1.25
NEK3-207ENST00000617054 NSA2O95478 260 aaKnown RBP7.25□□□□□ -1.25
NEK3-207ENST00000617054 HNRNPCL4P0DMR1 293 aa7.25□□□□□ -1.25
NEK3-207ENST00000617054 ZNF155Q12901 538 aaPredicted RBP7.25□□□□□ -1.25
NEK3-207ENST00000617054 TARDBPQ13148 414 aaKnown RBP eCLIP7.25□□□□□ -1.25
NEK3-207ENST00000617054 NDUFA9Q16795 377 aa7.25□□□□□ -1.25
NEK3-207ENST00000617054 COLEC12Q5KU26 742 aa7.25□□□□□ -1.25
NEK3-207ENST00000617054 DCST2Q5T1A1 773 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms