RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 CA5BQ9Y2D0 317 aa8.3□□□□□ -1.08
VPS11-206ENST00000614944 TRPM6Q9BX84 2022 aa8.3□□□□□ -1.08
VPS11-206ENST00000614944 PNMA8CA0A1B0GUJ8 204 aa8.3□□□□□ -1.08
VPS11-206ENST00000614944 A0A1W2PPC4 97 aa8.3□□□□□ -1.08
VPS11-206ENST00000614944 METTL15A6NJ78 407 aa8.3□□□□□ -1.08
VPS11-206ENST00000614944 K7ESF4 209 aa8.3□□□□□ -1.08
VPS11-206ENST00000614944 SLC28A1O00337 649 aa8.3□□□□□ -1.08
VPS11-206ENST00000614944 SAGP10523 405 aaPredicted RBP8.3□□□□□ -1.08
VPS11-206ENST00000614944 ALDH4A1P30038 563 aa8.3□□□□□ -1.08
VPS11-206ENST00000614944 RORAP35398 523 aa8.3□□□□□ -1.08
VPS11-206ENST00000614944 PGGT1BP53609 377 aa8.3□□□□□ -1.08
VPS11-206ENST00000614944 SLC26A5P58743 744 aa8.3□□□□□ -1.08
VPS11-206ENST00000614944 TFF2Q03403 129 aa8.3□□□□□ -1.08
VPS11-206ENST00000614944 SNTB1Q13884 538 aaKnown RBP8.3□□□□□ -1.08
VPS11-206ENST00000614944 COL28A1Q2UY09 1125 aa8.3□□□□□ -1.08
VPS11-206ENST00000614944 XKR7Q5GH72 579 aa8.3□□□□□ -1.08
VPS11-206ENST00000614944 GPR155Q7Z3F1 870 aa8.3□□□□□ -1.08
VPS11-206ENST00000614944 WDR5BQ86VZ2 330 aa8.3□□□□□ -1.08
VPS11-206ENST00000614944 VRK3Q8IV63 474 aa8.3□□□□□ -1.08
VPS11-206ENST00000614944 LRRC56Q8IYG6 542 aaPredicted RBP8.3□□□□□ -1.08
VPS11-206ENST00000614944 TRMT10AQ8TBZ6 339 aaKnown RBP8.3□□□□□ -1.08
VPS11-206ENST00000614944 SGPP1Q9BX95 441 aa8.3□□□□□ -1.08
VPS11-206ENST00000614944 ZDHHC5Q9C0B5 715 aa8.3□□□□□ -1.08
VPS11-206ENST00000614944 KLHL31Q9H511 634 aa8.3□□□□□ -1.08
VPS11-206ENST00000614944 ZFP57Q9NU63 452 aa8.3□□□□□ -1.08
VPS11-206ENST00000614944 ZDHHC2Q9UIJ5 367 aa8.3□□□□□ -1.08
VPS11-206ENST00000614944 EML5Q05BV3 1969 aa8.3□□□□□ -1.08
VPS11-206ENST00000614944 METTL12A8MUP2 240 aa8.3□□□□□ -1.08
VPS11-206ENST00000614944 G3V2T6 193 aa8.3□□□□□ -1.08
VPS11-206ENST00000614944 UBFD1O14562 309 aaKnown RBP8.3□□□□□ -1.08
VPS11-206ENST00000614944 INPP4BO15327 924 aa8.3□□□□□ -1.08
VPS11-206ENST00000614944 HPGDSO60760 199 aa8.3□□□□□ -1.08
VPS11-206ENST00000614944 STX11O75558 287 aa8.3□□□□□ -1.08
VPS11-206ENST00000614944 CREG1O75629 220 aa8.3□□□□□ -1.08
VPS11-206ENST00000614944 UBXN7O94888 489 aa8.3□□□□□ -1.08
VPS11-206ENST00000614944 HLA-DMAP28067 261 aa8.3□□□□□ -1.08
VPS11-206ENST00000614944 NDUFS1P28331 727 aa8.3□□□□□ -1.08
VPS11-206ENST00000614944 MSX1P28360 303 aa8.3□□□□□ -1.08
VPS11-206ENST00000614944 KCNJ3P48549 501 aa8.3□□□□□ -1.08
VPS11-206ENST00000614944 NUDT2P50583 147 aa8.3□□□□□ -1.08
VPS11-206ENST00000614944 BOP1Q14137 746 aaKnown RBP8.3□□□□□ -1.08
VPS11-206ENST00000614944 SLC9A5Q14940 896 aa8.3□□□□□ -1.08
VPS11-206ENST00000614944 TPRG1LQ5T0D9 272 aa8.3□□□□□ -1.08
VPS11-206ENST00000614944 INTS11Q5TA45 600 aaKnown RBP8.3□□□□□ -1.08
VPS11-206ENST00000614944 MEX3BQ6ZN04 569 aaKnown RBP8.3□□□□□ -1.08
VPS11-206ENST00000614944 DCUN1D3Q8IWE4 304 aa8.3□□□□□ -1.08
VPS11-206ENST00000614944 CBR4Q8N4T8 237 aa8.3□□□□□ -1.08
VPS11-206ENST00000614944 OR5K2Q8NHB8 316 aa8.3□□□□□ -1.08
VPS11-206ENST00000614944 CREB3L4Q8TEY5 395 aa8.3□□□□□ -1.08
VPS11-206ENST00000614944 MUL1Q969V5 352 aa8.3□□□□□ -1.08
VPS11-206ENST00000614944 TEFMQ96QE5 360 aaKnown RBP8.3□□□□□ -1.08
VPS11-206ENST00000614944 C2orf88Q9BSF0 95 aa8.3□□□□□ -1.08
VPS11-206ENST00000614944 PARD6GQ9BYG4 376 aaPredicted RBP8.3□□□□□ -1.08
VPS11-206ENST00000614944 OPA3Q9H6K4 179 aa8.3□□□□□ -1.08
VPS11-206ENST00000614944 UNKLQ9H9P5 680 aaKnown RBP8.3□□□□□ -1.08
VPS11-206ENST00000614944 BPTFQ12830 3046 aa8.29□□□□□ -1.08
VPS11-206ENST00000614944 RNF103-CHMP3A0A140T963 221 aa8.29□□□□□ -1.08
VPS11-206ENST00000614944 ATP6AP2A0A1C7CYW4 349 aa8.29□□□□□ -1.08
VPS11-206ENST00000614944 PRSS38A1L453 326 aa8.29□□□□□ -1.08
VPS11-206ENST00000614944 RFPL4AA6NLU0 287 aa8.29□□□□□ -1.08
VPS11-206ENST00000614944 ARHGEF33A8MVX0 844 aa8.29□□□□□ -1.08
VPS11-206ENST00000614944 RFPL4AL1F8VTS6 287 aa8.29□□□□□ -1.08
VPS11-206ENST00000614944 H0YAE9 185 aa8.29□□□□□ -1.08
VPS11-206ENST00000614944 AZIN1O14977 448 aa8.29□□□□□ -1.08
VPS11-206ENST00000614944 STK16O75716 305 aa8.29□□□□□ -1.08
VPS11-206ENST00000614944 SOX30O94993 753 aa8.29□□□□□ -1.08
VPS11-206ENST00000614944 PAK4O96013 591 aaPredicted RBP8.29□□□□□ -1.08
VPS11-206ENST00000614944 OR4E1P0C645 316 aa8.29□□□□□ -1.08
VPS11-206ENST00000614944 ATP5A1P25705 553 aaKnown RBP8.29□□□□□ -1.08
VPS11-206ENST00000614944 CD27P26842 260 aa8.29□□□□□ -1.08
VPS11-206ENST00000614944 TRAF3Q13114 568 aa8.29□□□□□ -1.08
VPS11-206ENST00000614944 GTF2H2Q13888 395 aa8.29□□□□□ -1.08
VPS11-206ENST00000614944 MEDAGQ5VYS4 303 aa8.29□□□□□ -1.08
VPS11-206ENST00000614944 GTF2H2CQ6P1K8 395 aa8.29□□□□□ -1.08
VPS11-206ENST00000614944 MZT2AQ6P582 158 aa8.29□□□□□ -1.08
VPS11-206ENST00000614944 SCIMPQ6UWF3 145 aa8.29□□□□□ -1.08
VPS11-206ENST00000614944 REC114Q7Z4M0 266 aa8.29□□□□□ -1.08
VPS11-206ENST00000614944 GOLGA7Q7Z5G4 137 aa8.29□□□□□ -1.08
VPS11-206ENST00000614944 ARL14Q8N4G2 192 aa8.29□□□□□ -1.08
VPS11-206ENST00000614944 CPEB3Q8NE35 698 aaKnown RBP8.29□□□□□ -1.08
VPS11-206ENST00000614944 PHOSPHO1Q8TCT1 267 aa8.29□□□□□ -1.08
VPS11-206ENST00000614944 DNASE2BQ8WZ79 361 aa8.29□□□□□ -1.08
VPS11-206ENST00000614944 EDAQ92838 391 aa8.29□□□□□ -1.08
VPS11-206ENST00000614944 RFT1Q96AA3 541 aa8.29□□□□□ -1.08
VPS11-206ENST00000614944 FRMD6Q96NE9 622 aa8.29□□□□□ -1.08
VPS11-206ENST00000614944 OR2M4Q96R27 311 aa8.29□□□□□ -1.08
VPS11-206ENST00000614944 LGR4Q9BXB1 951 aa8.29□□□□□ -1.08
VPS11-206ENST00000614944 MRPL37Q9BZE1 423 aaKnown RBP8.29□□□□□ -1.08
VPS11-206ENST00000614944 TRIM2Q9C040 744 aa8.29□□□□□ -1.08
VPS11-206ENST00000614944 PCBD2Q9H0N5 130 aa8.29□□□□□ -1.08
VPS11-206ENST00000614944 DUSP15Q9H1R2 295 aaPredicted RBP8.29□□□□□ -1.08
VPS11-206ENST00000614944 NT5DC2Q9H857 520 aa8.29□□□□□ -1.08
VPS11-206ENST00000614944 CARS2Q9HA77 564 aaKnown RBP8.29□□□□□ -1.08
VPS11-206ENST00000614944 SARS2Q9NP81 518 aaKnown RBP8.29□□□□□ -1.08
VPS11-206ENST00000614944 SEC14L4Q9UDX3 406 aa8.29□□□□□ -1.08
VPS11-206ENST00000614944 ANAPC2Q9UJX6 822 aa8.29□□□□□ -1.08
VPS11-206ENST00000614944 ZFC3H1O60293 1989 aaKnown RBP8.29□□□□□ -1.08
VPS11-206ENST00000614944 KCNE1BA0A087WTH5 132 aa8.29□□□□□ -1.08
VPS11-206ENST00000614944 A0A1W2PPL8 197 aa8.29□□□□□ -1.08
VPS11-206ENST00000614944 C9orf170A2RU37 121 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms