RNA–Protein interactions for RNA: ENST00000613899.4

FAM228B-208, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM228B, Length 1,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-208ENST00000613899 MBD3L4A6NDZ8 208 aaPredicted RBP20.68■□□□□ 0.9
FAM228B-208ENST00000613899 MBD3L3A6NE82 208 aaPredicted RBP20.68■□□□□ 0.9
FAM228B-208ENST00000613899 MBD3L5A6NJ08 208 aaPredicted RBP20.68■□□□□ 0.9
FAM228B-208ENST00000613899 AZIN1O14977 448 aa20.68■□□□□ 0.9
FAM228B-208ENST00000613899 TRIM13O60858 407 aa20.68■□□□□ 0.9
FAM228B-208ENST00000613899 CHEK2O96017 543 aa20.68■□□□□ 0.9
FAM228B-208ENST00000613899 IFI6P09912 130 aa20.68■□□□□ 0.9
FAM228B-208ENST00000613899 SRD5A2P31213 254 aa20.68■□□□□ 0.9
FAM228B-208ENST00000613899 WNT3P56703 355 aa20.68■□□□□ 0.9
FAM228B-208ENST00000613899 PSG6Q00889 435 aa20.68■□□□□ 0.9
FAM228B-208ENST00000613899 PRSS53Q2L4Q9 553 aa20.68■□□□□ 0.9
FAM228B-208ENST00000613899 ARSKQ6UWY0 536 aa20.68■□□□□ 0.9
FAM228B-208ENST00000613899 TMEM200AQ86VY9 491 aa20.68■□□□□ 0.9
FAM228B-208ENST00000613899 OR2L13Q8N349 312 aa20.68■□□□□ 0.9
FAM228B-208ENST00000613899 MBD3L2Q8NHZ7 208 aaPredicted RBP20.68■□□□□ 0.9
FAM228B-208ENST00000613899 ZPLD1Q8TCW7 415 aa20.68■□□□□ 0.9
FAM228B-208ENST00000613899 EFHD2Q96C19 240 aaPredicted RBP20.68■□□□□ 0.9
FAM228B-208ENST00000613899 AMDHD1Q96NU7 426 aa20.68■□□□□ 0.9
FAM228B-208ENST00000613899 GLIPR2Q9H4G4 154 aa20.68■□□□□ 0.9
FAM228B-208ENST00000613899 CALHM2Q9HA72 323 aa20.68■□□□□ 0.9
FAM228B-208ENST00000613899 LRTM1Q9HBL6 345 aa20.68■□□□□ 0.9
FAM228B-208ENST00000613899 ANKHD1Q8IWZ3 2542 aaKnown RBP20.68■□□□□ 0.9
FAM228B-208ENST00000613899 DOCK7Q96N67 2140 aa20.68■□□□□ 0.9
FAM228B-208ENST00000613899 MED12Q93074 2177 aa20.68■□□□□ 0.9
FAM228B-208ENST00000613899 TLDC2A0PJX2 215 aa20.67■□□□□ 0.9
FAM228B-208ENST00000613899 KDM4EB2RXH2 506 aaPredicted RBP20.67■□□□□ 0.9
FAM228B-208ENST00000613899 ZWINTO95229 277 aa20.67■□□□□ 0.9
FAM228B-208ENST00000613899 PSMG1O95456 288 aa20.67■□□□□ 0.9
FAM228B-208ENST00000613899 NUDT17P0C025 328 aa20.67■□□□□ 0.9
FAM228B-208ENST00000613899 CYP4B1P13584 511 aa20.67■□□□□ 0.9
FAM228B-208ENST00000613899 CPN1P15169 458 aa20.67■□□□□ 0.9
FAM228B-208ENST00000613899 GRK2P25098 689 aa20.67■□□□□ 0.9
FAM228B-208ENST00000613899 DLX5P56178 289 aa20.67■□□□□ 0.9
FAM228B-208ENST00000613899 KIAA0040Q15053 153 aa20.67■□□□□ 0.9
FAM228B-208ENST00000613899 ZNHIT3Q15649 155 aaPredicted RBP20.67■□□□□ 0.9
FAM228B-208ENST00000613899 CYP27C1Q4G0S4 372 aa20.67■□□□□ 0.9
FAM228B-208ENST00000613899 SH2D4BQ5SQS7 431 aa20.67■□□□□ 0.9
FAM228B-208ENST00000613899 AAGABQ6PD74 315 aa20.67■□□□□ 0.9
FAM228B-208ENST00000613899 OR4N2Q8NGD1 307 aa20.67■□□□□ 0.9
FAM228B-208ENST00000613899 ZNF764Q96H86 408 aaPredicted RBP20.67■□□□□ 0.9
FAM228B-208ENST00000613899 CCT7Q99832 543 aa20.67■□□□□ 0.9
FAM228B-208ENST00000613899 GATA5Q9BWX5 397 aaPredicted RBP20.67■□□□□ 0.9
FAM228B-208ENST00000613899 Q9N2J8 555 aa20.67■□□□□ 0.9
FAM228B-208ENST00000613899 TAS2R10Q9NYW0 307 aa20.67■□□□□ 0.9
FAM228B-208ENST00000613899 FOXD3Q9UJU5 478 aaPredicted RBP20.67■□□□□ 0.9
FAM228B-208ENST00000613899 DKKL1Q9UK85 242 aa20.67■□□□□ 0.9
FAM228B-208ENST00000613899 ITGB1BP2Q9UKP3 347 aa20.67■□□□□ 0.9
FAM228B-208ENST00000613899 FIS1Q9Y3D6 152 aa20.67■□□□□ 0.9
FAM228B-208ENST00000613899 PTGDR2Q9Y5Y4 395 aa20.67■□□□□ 0.9
FAM228B-208ENST00000613899 KIAA1549Q9HCM3 1950 aa20.66■□□□□ 0.9
FAM228B-208ENST00000613899 H0Y3Z8 333 aa20.66■□□□□ 0.9
FAM228B-208ENST00000613899 UPK1AO00322 258 aa20.66■□□□□ 0.9
FAM228B-208ENST00000613899 SYT5O00445 386 aa20.66■□□□□ 0.9
FAM228B-208ENST00000613899 PDPK1O15530 556 aa20.66■□□□□ 0.9
FAM228B-208ENST00000613899 UQCRC1P31930 480 aa20.66■□□□□ 0.9
FAM228B-208ENST00000613899 EVI2BP34910 448 aa20.66■□□□□ 0.9
FAM228B-208ENST00000613899 ZNF136P52737 540 aa20.66■□□□□ 0.9
FAM228B-208ENST00000613899 DECR1Q16698 335 aa20.66■□□□□ 0.9
FAM228B-208ENST00000613899 FBXL19-AS1Q494R0 122 aa20.66■□□□□ 0.9
FAM228B-208ENST00000613899 TRABD2AQ86V40 505 aa20.66■□□□□ 0.9
FAM228B-208ENST00000613899 BANPQ8N9N5 519 aa20.66■□□□□ 0.9
FAM228B-208ENST00000613899 OR2W6PQ8NHA6 318 aa20.66■□□□□ 0.9
FAM228B-208ENST00000613899 ELP4Q96EB1 424 aa20.66■□□□□ 0.9
FAM228B-208ENST00000613899 FBXL2Q9UKC9 423 aa20.66■□□□□ 0.9
FAM228B-208ENST00000613899 MRTO4Q9UKD2 239 aaKnown RBP20.66■□□□□ 0.9
FAM228B-208ENST00000613899 CBLCQ9ULV8 474 aa20.66■□□□□ 0.9
FAM228B-208ENST00000613899 ABCG2Q9UNQ0 655 aa20.66■□□□□ 0.9
FAM228B-208ENST00000613899 MRPS18CQ9Y3D5 142 aaKnown RBP20.66■□□□□ 0.9
FAM228B-208ENST00000613899 TACR1P25103 407 aa20.65■□□□□ 0.9
FAM228B-208ENST00000613899 GFRA1P56159 465 aa20.65■□□□□ 0.9
FAM228B-208ENST00000613899 IFFO1Q0D2I5 559 aa20.65■□□□□ 0.9
FAM228B-208ENST00000613899 KANK2Q63ZY3 851 aa20.65■□□□□ 0.9
FAM228B-208ENST00000613899 TRIM42Q8IWZ5 723 aa20.65■□□□□ 0.9
FAM228B-208ENST00000613899 OR4K17Q8NGC6 315 aa20.65■□□□□ 0.9
FAM228B-208ENST00000613899 RNASE6Q93091 150 aaKnown RBP20.65■□□□□ 0.9
FAM228B-208ENST00000613899 EGLN2Q96KS0 407 aa20.65■□□□□ 0.9
FAM228B-208ENST00000613899 FCRL1Q96LA6 429 aa20.65■□□□□ 0.9
FAM228B-208ENST00000613899 SH3GL2Q99962 352 aa20.65■□□□□ 0.9
FAM228B-208ENST00000613899 PPP4R1LQ9P1A2 415 aa20.65■□□□□ 0.9
FAM228B-208ENST00000613899 TMED5Q9Y3A6 229 aa20.65■□□□□ 0.9
FAM228B-208ENST00000613899 TTC36A6NLP5 189 aa20.64■□□□□ 0.89
FAM228B-208ENST00000613899 NPHS1O60500 1241 aa20.64■□□□□ 0.89
FAM228B-208ENST00000613899 CTSSP25774 331 aa20.64■□□□□ 0.89
FAM228B-208ENST00000613899 OPRM1P35372 400 aa20.64■□□□□ 0.89
FAM228B-208ENST00000613899 KIR2DL3P43628 341 aa20.64■□□□□ 0.89
FAM228B-208ENST00000613899 GAS1P54826 345 aa20.64■□□□□ 0.89
FAM228B-208ENST00000613899 PSMD4P55036 377 aaKnown RBP20.64■□□□□ 0.89
FAM228B-208ENST00000613899 VSNL1P62760 191 aa20.64■□□□□ 0.89
FAM228B-208ENST00000613899 RPL38P63173 70 aaKnown RBP20.64■□□□□ 0.89
FAM228B-208ENST00000613899 OR5M10Q6IEU7 315 aa20.64■□□□□ 0.89
FAM228B-208ENST00000613899 POMZP3Q6PJE2 187 aa20.64■□□□□ 0.89
FAM228B-208ENST00000613899 Q6ZSR9 355 aa20.64■□□□□ 0.89
FAM228B-208ENST00000613899 OR2T11Q8NH01 316 aa20.64■□□□□ 0.89
FAM228B-208ENST00000613899 ZFP28Q8NHY6 868 aa20.64■□□□□ 0.89
FAM228B-208ENST00000613899 GFM2Q969S9 779 aaKnown RBP20.64■□□□□ 0.89
FAM228B-208ENST00000613899 SFXN2Q96NB2 322 aa20.64■□□□□ 0.89
FAM228B-208ENST00000613899 ZFP3Q96NJ6 502 aa20.64■□□□□ 0.89
FAM228B-208ENST00000613899 FAM111AQ96PZ2 611 aa20.64■□□□□ 0.89
FAM228B-208ENST00000613899 TUBA1CQ9BQE3 449 aa20.64■□□□□ 0.89
FAM228B-208ENST00000613899 LMF2Q9BU23 707 aaKnown RBP20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms