RNA–Protein interactions for RNA: ENST00000613394.4

HPS1-215, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS1, Length 3,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-215ENST00000613394 SIM1P81133 766 aaPredicted RBP12.99□□□□□ -0.33
HPS1-215ENST00000613394 ZNF79Q15937 498 aa12.99□□□□□ -0.33
HPS1-215ENST00000613394 SAXO2Q658L1 398 aa12.99□□□□□ -0.33
HPS1-215ENST00000613394 BBS1Q8NFJ9 593 aa12.99□□□□□ -0.33
HPS1-215ENST00000613394 GRPEL2Q8TAA5 225 aa12.99□□□□□ -0.33
HPS1-215ENST00000613394 CREB3L4Q8TEY5 395 aa12.99□□□□□ -0.33
HPS1-215ENST00000613394 LGR4Q9BXB1 951 aa12.99□□□□□ -0.33
HPS1-215ENST00000613394 LOC105369274A0A096LPK9 316 aa12.99□□□□□ -0.33
HPS1-215ENST00000613394 A0A1W2PRG6 482 aa12.99□□□□□ -0.33
HPS1-215ENST00000613394 DHFRP00374 187 aa12.99□□□□□ -0.33
HPS1-215ENST00000613394 NT5EP21589 574 aa12.99□□□□□ -0.33
HPS1-215ENST00000613394 PPP3R1P63098 170 aa12.99□□□□□ -0.33
HPS1-215ENST00000613394 DSG2Q14126 1118 aa12.99□□□□□ -0.33
HPS1-215ENST00000613394 CAMKMTQ7Z624 323 aa12.99□□□□□ -0.33
HPS1-215ENST00000613394 TMC8Q8IU68 726 aa12.99□□□□□ -0.33
HPS1-215ENST00000613394 NKAIN4Q8IVV8 208 aa12.99□□□□□ -0.33
HPS1-215ENST00000613394 PEX5LQ8IYB4 626 aa12.99□□□□□ -0.33
HPS1-215ENST00000613394 OR4N4Q8N0Y3 316 aa12.99□□□□□ -0.33
HPS1-215ENST00000613394 HDDC3Q8N4P3 179 aa12.99□□□□□ -0.33
HPS1-215ENST00000613394 BEST4Q8NFU0 473 aa12.99□□□□□ -0.33
HPS1-215ENST00000613394 OR2L2Q8NH16 312 aa12.99□□□□□ -0.33
HPS1-215ENST00000613394 ZNF296Q8WUU4 475 aaPredicted RBP12.99□□□□□ -0.33
HPS1-215ENST00000613394 NDUFB11Q9NX14 153 aa12.99□□□□□ -0.33
HPS1-215ENST00000613394 EXOSC1Q9Y3B2 195 aaKnown RBP12.99□□□□□ -0.33
HPS1-215ENST00000613394 PPIL1Q9Y3C6 166 aa12.99□□□□□ -0.33
HPS1-215ENST00000613394 PLEKHM1Q9Y4G2 1056 aa12.99□□□□□ -0.33
HPS1-215ENST00000613394 ATG4BQ9Y4P1 393 aa12.99□□□□□ -0.33
HPS1-215ENST00000613394 TBC1D3DA0A087WVF3 549 aa12.98□□□□□ -0.33
HPS1-215ENST00000613394 TBC1D3IA0A087WXS9 549 aa12.98□□□□□ -0.33
HPS1-215ENST00000613394 TBC1D3EA0A087X179 549 aa12.98□□□□□ -0.33
HPS1-215ENST00000613394 TBC1D3KA0A087X1G2 549 aa12.98□□□□□ -0.33
HPS1-215ENST00000613394 TBC1D3FA6NER0 549 aaPredicted RBP12.98□□□□□ -0.33
HPS1-215ENST00000613394 TBC1D3LB9A6J9 549 aa12.98□□□□□ -0.33
HPS1-215ENST00000613394 PRRT4C9JH25 899 aa12.98□□□□□ -0.33
HPS1-215ENST00000613394 KIAA0355O15063 1070 aa12.98□□□□□ -0.33
HPS1-215ENST00000613394 FKTNO75072 461 aa12.98□□□□□ -0.33
HPS1-215ENST00000613394 TBC1D3HP0C7X1 549 aa12.98□□□□□ -0.33
HPS1-215ENST00000613394 CEBPBP17676 345 aa12.98□□□□□ -0.33
HPS1-215ENST00000613394 TBC1D3GQ6DHY5 549 aa12.98□□□□□ -0.33
HPS1-215ENST00000613394 TBC1D3CQ6IPX1 549 aa12.98□□□□□ -0.33
HPS1-215ENST00000613394 GET4Q7L5D6 327 aaPredicted RBP12.98□□□□□ -0.33
HPS1-215ENST00000613394 C12orf40Q86WS4 652 aa12.98□□□□□ -0.33
HPS1-215ENST00000613394 ZNF547Q8IVP9 402 aa12.98□□□□□ -0.33
HPS1-215ENST00000613394 SFTPA1Q8IWL2 248 aa12.98□□□□□ -0.33
HPS1-215ENST00000613394 TBC1D3Q8IZP1 549 aaPredicted RBP12.98□□□□□ -0.33
HPS1-215ENST00000613394 SUN3Q8TAQ9 357 aa12.98□□□□□ -0.33
HPS1-215ENST00000613394 GNPDA2Q8TDQ7 276 aa12.98□□□□□ -0.33
HPS1-215ENST00000613394 LCN9Q8WX39 176 aa12.98□□□□□ -0.33
HPS1-215ENST00000613394 ST6GAL2Q96JF0 529 aa12.98□□□□□ -0.33
HPS1-215ENST00000613394 SNX18Q96RF0 628 aa12.98□□□□□ -0.33
HPS1-215ENST00000613394 SIGLEC11Q96RL6 698 aa12.98□□□□□ -0.33
HPS1-215ENST00000613394 SDHCQ99643 169 aaPredicted RBP12.98□□□□□ -0.33
HPS1-215ENST00000613394 GPA33Q99795 319 aa12.98□□□□□ -0.33
HPS1-215ENST00000613394 IGFLR1Q9H665 355 aa12.98□□□□□ -0.33
HPS1-215ENST00000613394 TRPM6Q9BX84 2022 aa12.98□□□□□ -0.33
HPS1-215ENST00000613394 IRGMA1A4Y4 181 aa12.98□□□□□ -0.33
HPS1-215ENST00000613394 NOS1APO75052 506 aaPredicted RBP12.98□□□□□ -0.33
HPS1-215ENST00000613394 SEMA3DO95025 777 aa12.98□□□□□ -0.33
HPS1-215ENST00000613394 CHRM4P08173 479 aa12.98□□□□□ -0.33
HPS1-215ENST00000613394 HOXB3P14651 431 aaPredicted RBP12.98□□□□□ -0.33
HPS1-215ENST00000613394 FUT1P19526 365 aa12.98□□□□□ -0.33
HPS1-215ENST00000613394 MAB21L1Q13394 359 aa12.98□□□□□ -0.33
HPS1-215ENST00000613394 GPR50Q13585 617 aa12.98□□□□□ -0.33
HPS1-215ENST00000613394 DOC2BQ14184 412 aa12.98□□□□□ -0.33
HPS1-215ENST00000613394 PLK5Q496M5 336 aa12.98□□□□□ -0.33
HPS1-215ENST00000613394 DEFB134Q4QY38 66 aa12.98□□□□□ -0.33
HPS1-215ENST00000613394 LCTLQ6UWM7 567 aa12.98□□□□□ -0.33
HPS1-215ENST00000613394 VITQ6UXI7 678 aa12.98□□□□□ -0.33
HPS1-215ENST00000613394 CXXC5Q7LFL8 322 aaKnown RBP12.98□□□□□ -0.33
HPS1-215ENST00000613394 TMEFF1Q8IYR6 380 aa12.98□□□□□ -0.33
HPS1-215ENST00000613394 ACOT4Q8N9L9 421 aa12.98□□□□□ -0.33
HPS1-215ENST00000613394 FAM98AQ8NCA5 519 aaKnown RBP12.98□□□□□ -0.33
HPS1-215ENST00000613394 AMDHD1Q96NU7 426 aa12.98□□□□□ -0.33
HPS1-215ENST00000613394 POLDIP3Q9BY77 421 aaKnown RBP12.98□□□□□ -0.33
HPS1-215ENST00000613394 BTBD1Q9H0C5 482 aa12.98□□□□□ -0.33
HPS1-215ENST00000613394 KRCC1Q9NPI7 259 aaPredicted RBP12.98□□□□□ -0.33
HPS1-215ENST00000613394 REV1Q9UBZ9 1251 aa12.98□□□□□ -0.33
HPS1-215ENST00000613394 PRKAG2Q9UGJ0 569 aa12.98□□□□□ -0.33
HPS1-215ENST00000613394 DPP7Q9UHL4 492 aa12.98□□□□□ -0.33
HPS1-215ENST00000613394 ING4Q9UNL4 249 aa12.98□□□□□ -0.33
HPS1-215ENST00000613394 DIMT1Q9UNQ2 313 aaKnown RBP12.98□□□□□ -0.33
HPS1-215ENST00000613394 GABRPO00591 440 aa12.98□□□□□ -0.33
HPS1-215ENST00000613394 PIP5K1CO60331 668 aa12.98□□□□□ -0.33
HPS1-215ENST00000613394 ACP2P11117 423 aa12.98□□□□□ -0.33
HPS1-215ENST00000613394 PYCR1P32322 319 aa12.98□□□□□ -0.33
HPS1-215ENST00000613394 TRIM23P36406 574 aa12.98□□□□□ -0.33
HPS1-215ENST00000613394 RPL4P36578 427 aaKnown RBP12.98□□□□□ -0.33
HPS1-215ENST00000613394 SLC1A3P43003 542 aa12.98□□□□□ -0.33
HPS1-215ENST00000613394 ADAM15Q13444 863 aa12.98□□□□□ -0.33
HPS1-215ENST00000613394 GOT1L1Q8NHS2 421 aaPredicted RBP12.98□□□□□ -0.33
HPS1-215ENST00000613394 TMEM163Q8TC26 289 aa12.98□□□□□ -0.33
HPS1-215ENST00000613394 FCRL1Q96LA6 429 aa12.98□□□□□ -0.33
HPS1-215ENST00000613394 CAMK1GQ96NX5 476 aa12.98□□□□□ -0.33
HPS1-215ENST00000613394 GTF2A1LQ9UNN4 478 aa12.98□□□□□ -0.33
HPS1-215ENST00000613394 V9GYH0 126 aa12.98□□□□□ -0.33
HPS1-215ENST00000613394 GMFGO60234 142 aa12.97□□□□□ -0.33
HPS1-215ENST00000613394 FCMRO60667 390 aa12.97□□□□□ -0.33
HPS1-215ENST00000613394 UBXN7O94888 489 aa12.97□□□□□ -0.33
HPS1-215ENST00000613394 PAHP00439 452 aa12.97□□□□□ -0.33
HPS1-215ENST00000613394 DRD5P21918 477 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms