RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 PARM1Q6UWI2 310 aa16.14■□□□□ 0.18
NEK3-206ENST00000611833 RASSF6Q6ZTQ3 369 aa16.14■□□□□ 0.18
NEK3-206ENST00000611833 SCAIQ8N9R8 606 aa16.14■□□□□ 0.18
NEK3-206ENST00000611833 SETD6Q8TBK2 473 aa16.14■□□□□ 0.18
NEK3-206ENST00000611833 ADAMTS15Q8TE58 950 aa16.14■□□□□ 0.18
NEK3-206ENST00000611833 FGF14Q92915 247 aa16.14■□□□□ 0.18
NEK3-206ENST00000611833 KCTD7Q96MP8 289 aa16.14■□□□□ 0.18
NEK3-206ENST00000611833 WDFY2Q96P53 400 aa16.14■□□□□ 0.18
NEK3-206ENST00000611833 ACTRT3Q9BYD9 372 aa16.14■□□□□ 0.18
NEK3-206ENST00000611833 FGF20Q9NP95 211 aaPredicted RBP16.14■□□□□ 0.18
NEK3-206ENST00000611833 MRPS18AQ9NVS2 196 aaKnown RBP16.14■□□□□ 0.18
NEK3-206ENST00000611833 LYARQ9NX58 379 aaKnown RBP16.14■□□□□ 0.18
NEK3-206ENST00000611833 ITGB1BP2Q9UKP3 347 aa16.14■□□□□ 0.18
NEK3-206ENST00000611833 COLEC10Q9Y6Z7 277 aa16.14■□□□□ 0.18
NEK3-206ENST00000611833 TMEM129A0AVI4 362 aa16.14■□□□□ 0.17
NEK3-206ENST00000611833 HTR3EA5X5Y0 456 aa16.14■□□□□ 0.17
NEK3-206ENST00000611833 AP3D1O14617 1153 aa16.14■□□□□ 0.17
NEK3-206ENST00000611833 CLEC2LP0C7M8 214 aa16.14■□□□□ 0.17
NEK3-206ENST00000611833 TRHRP34981 398 aaPredicted RBP16.14■□□□□ 0.17
NEK3-206ENST00000611833 GAS1P54826 345 aa16.14■□□□□ 0.17
NEK3-206ENST00000611833 OR2B6P58173 313 aa16.14■□□□□ 0.17
NEK3-206ENST00000611833 ITPRIPL2Q3MIP1 535 aa16.14■□□□□ 0.17
NEK3-206ENST00000611833 PLK5Q496M5 336 aa16.14■□□□□ 0.17
NEK3-206ENST00000611833 CRTC2Q53ET0 693 aaPredicted RBP16.14■□□□□ 0.17
NEK3-206ENST00000611833 ZNF425Q6IV72 752 aa16.14■□□□□ 0.17
NEK3-206ENST00000611833 PLEKHM3Q6ZWE6 761 aa16.14■□□□□ 0.17
NEK3-206ENST00000611833 SHFQ7M4L6 423 aa16.14■□□□□ 0.17
NEK3-206ENST00000611833 NRARPQ7Z6K4 114 aa16.14■□□□□ 0.17
NEK3-206ENST00000611833 OR52P1PQ8NH57 321 aa16.14■□□□□ 0.17
NEK3-206ENST00000611833 DIO2Q92813 273 aa16.14■□□□□ 0.17
NEK3-206ENST00000611833 UFD1Q92890 307 aa16.14■□□□□ 0.17
NEK3-206ENST00000611833 COL26A1Q96A83 441 aa16.14■□□□□ 0.17
NEK3-206ENST00000611833 ZNF681Q96N22 645 aa16.14■□□□□ 0.17
NEK3-206ENST00000611833 MYADMQ96S97 322 aa16.14■□□□□ 0.17
NEK3-206ENST00000611833 C1QTNF7Q9BXJ2 289 aa16.14■□□□□ 0.17
NEK3-206ENST00000611833 TMEM165Q9HC07 324 aa16.14■□□□□ 0.17
NEK3-206ENST00000611833 ABCB9Q9NP78 766 aa16.14■□□□□ 0.17
NEK3-206ENST00000611833 YARS2Q9Y2Z4 477 aaKnown RBP16.14■□□□□ 0.17
NEK3-206ENST00000611833 EXOSC1Q9Y3B2 195 aaKnown RBP16.14■□□□□ 0.17
NEK3-206ENST00000611833 STK25O00506 426 aa16.13■□□□□ 0.17
NEK3-206ENST00000611833 SLC30A4O14863 429 aa16.13■□□□□ 0.17
NEK3-206ENST00000611833 SLC31A1O15431 190 aa16.13■□□□□ 0.17
NEK3-206ENST00000611833 ADPRHP54922 357 aa16.13■□□□□ 0.17
NEK3-206ENST00000611833 RGS8P57771 180 aaPredicted RBP16.13■□□□□ 0.17
NEK3-206ENST00000611833 RPS25P62851 125 aaKnown RBP16.13■□□□□ 0.17
NEK3-206ENST00000611833 COL9A2Q14055 689 aaPredicted RBP16.13■□□□□ 0.17
NEK3-206ENST00000611833 C6orf132Q5T0Z8 1188 aa16.13■□□□□ 0.17
NEK3-206ENST00000611833 AGAP6Q5VW22 663 aa16.13■□□□□ 0.17
NEK3-206ENST00000611833 TYW3Q6IPR3 259 aaKnown RBP16.13■□□□□ 0.17
NEK3-206ENST00000611833 FAM131AQ6UXB0 335 aa16.13■□□□□ 0.17
NEK3-206ENST00000611833 AMIGO1Q86WK6 493 aa16.13■□□□□ 0.17
NEK3-206ENST00000611833 CLDN22Q8N7P3 220 aa16.13■□□□□ 0.17
NEK3-206ENST00000611833 KCT2Q8NC54 265 aa16.13■□□□□ 0.17
NEK3-206ENST00000611833 PSD4Q8NDX1 1056 aa16.13■□□□□ 0.17
NEK3-206ENST00000611833 LCN9Q8WX39 176 aa16.13■□□□□ 0.17
NEK3-206ENST00000611833 TM9SF4Q92544 642 aa16.13■□□□□ 0.17
NEK3-206ENST00000611833 AGAP4Q96P64 663 aa16.13■□□□□ 0.17
NEK3-206ENST00000611833 FCRL4Q96PJ5 515 aa16.13■□□□□ 0.17
NEK3-206ENST00000611833 TEX12Q9BXU0 123 aa16.13■□□□□ 0.17
NEK3-206ENST00000611833 TIGARQ9NQ88 270 aa16.13■□□□□ 0.17
NEK3-206ENST00000611833 RBMX2Q9Y388 322 aaKnown RBP16.13■□□□□ 0.17
NEK3-206ENST00000611833 HEBP2Q9Y5Z4 205 aa16.13■□□□□ 0.17
NEK3-206ENST00000611833 TBC1D3DA0A087WVF3 549 aa16.13■□□□□ 0.17
NEK3-206ENST00000611833 TBC1D3IA0A087WXS9 549 aa16.13■□□□□ 0.17
NEK3-206ENST00000611833 TBC1D3EA0A087X179 549 aa16.13■□□□□ 0.17
NEK3-206ENST00000611833 TBC1D3KA0A087X1G2 549 aa16.13■□□□□ 0.17
NEK3-206ENST00000611833 LINC00854A0A1B0GVQ3 168 aa16.13■□□□□ 0.17
NEK3-206ENST00000611833 SLC35F4A4IF30 521 aa16.13■□□□□ 0.17
NEK3-206ENST00000611833 TBC1D3FA6NER0 549 aaPredicted RBP16.13■□□□□ 0.17
NEK3-206ENST00000611833 A8MU76 341 aa16.13■□□□□ 0.17
NEK3-206ENST00000611833 TBC1D3LB9A6J9 549 aa16.13■□□□□ 0.17
NEK3-206ENST00000611833 NARSO43776 548 aaKnown RBP16.13■□□□□ 0.17
NEK3-206ENST00000611833 FCMRO60667 390 aa16.13■□□□□ 0.17
NEK3-206ENST00000611833 CCNKO75909 580 aa16.13■□□□□ 0.17
NEK3-206ENST00000611833 EML2O95834 649 aa16.13■□□□□ 0.17
NEK3-206ENST00000611833 CH25HO95992 272 aa16.13■□□□□ 0.17
NEK3-206ENST00000611833 TBC1D3HP0C7X1 549 aa16.13■□□□□ 0.17
NEK3-206ENST00000611833 SDC2P34741 201 aa16.13■□□□□ 0.17
NEK3-206ENST00000611833 ZNF79Q15937 498 aa16.13■□□□□ 0.17
NEK3-206ENST00000611833 BAK1Q16611 211 aa16.13■□□□□ 0.17
NEK3-206ENST00000611833 C9orf50Q5SZB4 431 aa16.13■□□□□ 0.17
NEK3-206ENST00000611833 TBC1D3GQ6DHY5 549 aa16.13■□□□□ 0.17
NEK3-206ENST00000611833 TBC1D3CQ6IPX1 549 aa16.13■□□□□ 0.17
NEK3-206ENST00000611833 DGLUCYQ7Z3D6 616 aa16.13■□□□□ 0.17
NEK3-206ENST00000611833 MRGPREQ86SM8 312 aa16.13■□□□□ 0.17
NEK3-206ENST00000611833 TBC1D3Q8IZP1 549 aaPredicted RBP16.13■□□□□ 0.17
NEK3-206ENST00000611833 GALNT6Q8NCL4 622 aa16.13■□□□□ 0.17
NEK3-206ENST00000611833 SRRQ9GZT4 340 aa16.13■□□□□ 0.17
NEK3-206ENST00000611833 YBX2Q9Y2T7 364 aaKnown RBP16.13■□□□□ 0.17
NEK3-206ENST00000611833 DNAH14Q0VDD8 3507 aa16.13■□□□□ 0.17
NEK3-206ENST00000611833 SZT2Q5T011 3432 aa16.13■□□□□ 0.17
NEK3-206ENST00000611833 A0A1W2PQL4 384 aaPredicted RBP16.12■□□□□ 0.17
NEK3-206ENST00000611833 MSL3P1P0C860 447 aa16.12■□□□□ 0.17
NEK3-206ENST00000611833 GNSP15586 552 aa16.12■□□□□ 0.17
NEK3-206ENST00000611833 PRKAR1BP31321 381 aa16.12■□□□□ 0.17
NEK3-206ENST00000611833 OMPP47874 163 aa16.12■□□□□ 0.17
NEK3-206ENST00000611833 SLC9A3P48764 834 aa16.12■□□□□ 0.17
NEK3-206ENST00000611833 PDX1P52945 283 aa16.12■□□□□ 0.17
NEK3-206ENST00000611833 NKX2-5P52952 324 aaPredicted RBP16.12■□□□□ 0.17
NEK3-206ENST00000611833 CDH11P55287 796 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms