RNA–Protein interactions for RNA: ENST00000608532.1

HDDC2-207, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 553 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-207ENST00000608532 MEPEQ9NQ76 525 aaPredicted RBP2.83□□□□□ -1.96
HDDC2-207ENST00000608532 LHX3Q9UBR4 397 aa2.83□□□□□ -1.96
HDDC2-207ENST00000608532 MIOXQ9UGB7 285 aa2.83□□□□□ -1.96
HDDC2-207ENST00000608532 ZNF221Q9UK13 617 aa2.83□□□□□ -1.96
HDDC2-207ENST00000608532 NPIPA2E9PIF3 369 aa2.82□□□□□ -1.96
HDDC2-207ENST00000608532 H3BMH7 237 aa2.82□□□□□ -1.96
HDDC2-207ENST00000608532 ARPC1BO15143 372 aaKnown RBP2.82□□□□□ -1.96
HDDC2-207ENST00000608532 CENPBP07199 599 aaPredicted RBP2.82□□□□□ -1.96
HDDC2-207ENST00000608532 ATP5DP30049 168 aa2.82□□□□□ -1.96
HDDC2-207ENST00000608532 RFC2P35250 354 aa2.82□□□□□ -1.96
HDDC2-207ENST00000608532 MECOMQ03112 1051 aa2.82□□□□□ -1.96
HDDC2-207ENST00000608532 PRR4Q16378 134 aa2.82□□□□□ -1.96
HDDC2-207ENST00000608532 UFSP1Q6NVU6 142 aa2.82□□□□□ -1.96
HDDC2-207ENST00000608532 PNCKQ6P2M8 343 aa2.82□□□□□ -1.96
HDDC2-207ENST00000608532 PARGQ86W56 976 aa2.82□□□□□ -1.96
HDDC2-207ENST00000608532 GPBP1Q86WP2 473 aa2.82□□□□□ -1.96
HDDC2-207ENST00000608532 CHCHD4Q8N4Q1 142 aa2.82□□□□□ -1.96
HDDC2-207ENST00000608532 Q8N9L7 120 aa2.82□□□□□ -1.96
HDDC2-207ENST00000608532 CNPY3Q9BT09 278 aa2.82□□□□□ -1.96
HDDC2-207ENST00000608532 FAM114A2Q9NRY5 505 aa2.82□□□□□ -1.96
HDDC2-207ENST00000608532 STARD5Q9NSY2 213 aa2.82□□□□□ -1.96
HDDC2-207ENST00000608532 DHRS7Q9Y394 339 aa2.82□□□□□ -1.96
HDDC2-207ENST00000608532 LATO43561 262 aa2.81□□□□□ -1.96
HDDC2-207ENST00000608532 HTATSF1O43719 755 aaKnown RBP2.81□□□□□ -1.96
HDDC2-207ENST00000608532 RTN2O75298 545 aa2.81□□□□□ -1.96
HDDC2-207ENST00000608532 IGFBP1P08833 259 aaPredicted RBP2.81□□□□□ -1.96
HDDC2-207ENST00000608532 MUTP22033 750 aa2.81□□□□□ -1.96
HDDC2-207ENST00000608532 STK19P49842 368 aaPredicted RBP2.81□□□□□ -1.96
HDDC2-207ENST00000608532 CCL11P51671 97 aa2.81□□□□□ -1.96
HDDC2-207ENST00000608532 CASP9P55211 416 aa2.81□□□□□ -1.96
HDDC2-207ENST00000608532 RPL32P62910 135 aaKnown RBP2.81□□□□□ -1.96
HDDC2-207ENST00000608532 UBXN1Q04323 297 aa2.81□□□□□ -1.96
HDDC2-207ENST00000608532 ZNF674Q2M3X9 581 aa2.81□□□□□ -1.96
HDDC2-207ENST00000608532 ZNF57Q68EA5 555 aaPredicted RBP2.81□□□□□ -1.96
HDDC2-207ENST00000608532 HSD17B13Q7Z5P4 300 aaPredicted RBP2.81□□□□□ -1.96
HDDC2-207ENST00000608532 CSNK1A1LQ8N752 337 aa2.81□□□□□ -1.96
HDDC2-207ENST00000608532 COLGALT1Q8NBJ5 622 aa2.81□□□□□ -1.96
HDDC2-207ENST00000608532 NFAM1Q8NET5 270 aaPredicted RBP2.81□□□□□ -1.96
HDDC2-207ENST00000608532 ADAMTS16Q8TE57 1224 aa2.81□□□□□ -1.96
HDDC2-207ENST00000608532 TMEM45BQ96B21 275 aa2.81□□□□□ -1.96
HDDC2-207ENST00000608532 PLEKHF1Q96S99 279 aa2.81□□□□□ -1.96
HDDC2-207ENST00000608532 CARD6Q9BX69 1037 aa2.81□□□□□ -1.96
HDDC2-207ENST00000608532 TMEM245Q9H330 911 aa2.81□□□□□ -1.96
HDDC2-207ENST00000608532 KCNMB3Q9NPA1 279 aa2.81□□□□□ -1.96
HDDC2-207ENST00000608532 DCAF13Q9NV06 445 aaKnown RBP2.81□□□□□ -1.96
HDDC2-207ENST00000608532 FAM153AQ9UHL3 310 aa2.81□□□□□ -1.96
HDDC2-207ENST00000608532 TRMT6Q9UJA5 497 aaKnown RBP2.81□□□□□ -1.96
HDDC2-207ENST00000608532 NPC1L1Q9UHC9 1359 aa2.81□□□□□ -1.96
HDDC2-207ENST00000608532 PTPRUQ92729 1446 aa2.81□□□□□ -1.96
HDDC2-207ENST00000608532 USP6P35125 1406 aa2.8□□□□□ -1.96
HDDC2-207ENST00000608532 A0A1W2PRQ8 180 aa2.8□□□□□ -1.96
HDDC2-207ENST00000608532 TLR4O00206 839 aa2.8□□□□□ -1.96
HDDC2-207ENST00000608532 NME2P1O60361 137 aa2.8□□□□□ -1.96
HDDC2-207ENST00000608532 LRP3O75074 770 aa2.8□□□□□ -1.96
HDDC2-207ENST00000608532 CA11O75493 328 aa2.8□□□□□ -1.96
HDDC2-207ENST00000608532 GNSP15586 552 aa2.8□□□□□ -1.96
HDDC2-207ENST00000608532 CNN1P51911 297 aaKnown RBP2.8□□□□□ -1.96
HDDC2-207ENST00000608532 KRTAP10-1P60331 282 aa2.8□□□□□ -1.96
HDDC2-207ENST00000608532 ZNF45Q02386 682 aa2.8□□□□□ -1.96
HDDC2-207ENST00000608532 PPP1R8Q12972 351 aaKnown RBP2.8□□□□□ -1.96
HDDC2-207ENST00000608532 DPYSQ14117 519 aa2.8□□□□□ -1.96
HDDC2-207ENST00000608532 CARTPTQ16568 116 aa2.8□□□□□ -1.96
HDDC2-207ENST00000608532 ZNF699Q32M78 642 aa2.8□□□□□ -1.96
HDDC2-207ENST00000608532 CCDC14Q49A88 953 aa2.8□□□□□ -1.96
HDDC2-207ENST00000608532 BEND6Q5SZJ8 279 aaPredicted RBP2.8□□□□□ -1.96
HDDC2-207ENST00000608532 Q6P435 159 aa2.8□□□□□ -1.96
HDDC2-207ENST00000608532 IYDQ6PHW0 289 aa2.8□□□□□ -1.96
HDDC2-207ENST00000608532 ZNF410Q86VK4 478 aa2.8□□□□□ -1.96
HDDC2-207ENST00000608532 C10orf53Q8N6V4 93 aa2.8□□□□□ -1.96
HDDC2-207ENST00000608532 BBS1Q8NFJ9 593 aa2.8□□□□□ -1.96
HDDC2-207ENST00000608532 PSMA8Q8TAA3 256 aa2.8□□□□□ -1.96
HDDC2-207ENST00000608532 ANKRD49Q8WVL7 239 aa2.8□□□□□ -1.96
HDDC2-207ENST00000608532 ATP6V1E2Q96A05 226 aa2.8□□□□□ -1.96
HDDC2-207ENST00000608532 TADA1Q96BN2 335 aa2.8□□□□□ -1.96
HDDC2-207ENST00000608532 IL4I1Q96RQ9 567 aa2.8□□□□□ -1.96
HDDC2-207ENST00000608532 NICN1Q9BSH3 213 aa2.8□□□□□ -1.96
HDDC2-207ENST00000608532 CCSER1Q9C0I3 900 aa2.8□□□□□ -1.96
HDDC2-207ENST00000608532 NANOGQ9H9S0 305 aa2.8□□□□□ -1.96
HDDC2-207ENST00000608532 CWC25Q9NXE8 425 aaPredicted RBP2.8□□□□□ -1.96
HDDC2-207ENST00000608532 KLK12Q9UKR0 248 aa2.8□□□□□ -1.96
HDDC2-207ENST00000608532 FZR1Q9UM11 496 aa2.8□□□□□ -1.96
HDDC2-207ENST00000608532 LRRK1Q38SD2 2015 aa2.8□□□□□ -1.96
HDDC2-207ENST00000608532 MACROD2A1Z1Q3 448 aa2.79□□□□□ -1.96
HDDC2-207ENST00000608532 E9PLD3 99 aa2.79□□□□□ -1.96
HDDC2-207ENST00000608532 BUB1O43683 1085 aa2.79□□□□□ -1.96
HDDC2-207ENST00000608532 HSF2BPO75031 334 aa2.79□□□□□ -1.96
HDDC2-207ENST00000608532 GPX5O75715 221 aa2.79□□□□□ -1.96
HDDC2-207ENST00000608532 MMP23AO75900 390 aa2.79□□□□□ -1.96
HDDC2-207ENST00000608532 ANP32DO95626 131 aa2.79□□□□□ -1.96
HDDC2-207ENST00000608532 VDRP11473 427 aa2.79□□□□□ -1.96
HDDC2-207ENST00000608532 RPS6P62753 249 aaKnown RBP2.79□□□□□ -1.96
HDDC2-207ENST00000608532 NME3Q13232 169 aa2.79□□□□□ -1.96
HDDC2-207ENST00000608532 LIPKQ5VXJ0 399 aa2.79□□□□□ -1.96
HDDC2-207ENST00000608532 FRA10AC1Q70Z53 315 aa2.79□□□□□ -1.96
HDDC2-207ENST00000608532 YRDCQ86U90 279 aaKnown RBP2.79□□□□□ -1.96
HDDC2-207ENST00000608532 SFRP1Q8N474 314 aa2.79□□□□□ -1.96
HDDC2-207ENST00000608532 NKAIN3Q8N8D7 197 aa2.79□□□□□ -1.96
HDDC2-207ENST00000608532 PHYHIPQ92561 330 aa2.79□□□□□ -1.96
HDDC2-207ENST00000608532 VPS39Q96JC1 886 aa2.79□□□□□ -1.96
HDDC2-207ENST00000608532 FAM124BQ9H5Z6 455 aaPredicted RBP2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms