RNA–Protein interactions for RNA: ENST00000608425.5

CTCFL-217, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,915 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-217ENST00000608425 FXYD6-FXYD2A0A087WZ82 144 aa11.22□□□□□ -0.61
CTCFL-217ENST00000608425 LRATO95237 230 aa11.22□□□□□ -0.61
CTCFL-217ENST00000608425 SERPINA3P01011 423 aa11.22□□□□□ -0.61
CTCFL-217ENST00000608425 USP17L7P0C7H9 530 aa11.22□□□□□ -0.61
CTCFL-217ENST00000608425 ZNF44P15621 663 aa11.22□□□□□ -0.61
CTCFL-217ENST00000608425 RORAP35398 523 aa11.22□□□□□ -0.61
CTCFL-217ENST00000608425 TPI1P60174 286 aa11.22□□□□□ -0.61
CTCFL-217ENST00000608425 MLLT11Q13015 90 aaPredicted RBP11.22□□□□□ -0.61
CTCFL-217ENST00000608425 GSG1LQ6UXU4 331 aa11.22□□□□□ -0.61
CTCFL-217ENST00000608425 HDDC3Q8N4P3 179 aa11.22□□□□□ -0.61
CTCFL-217ENST00000608425 MAL2Q969L2 176 aa11.22□□□□□ -0.61
CTCFL-217ENST00000608425 NEU1Q99519 415 aa11.22□□□□□ -0.61
CTCFL-217ENST00000608425 PAAF1Q9BRP4 392 aa11.22□□□□□ -0.61
CTCFL-217ENST00000608425 YIPF4Q9BSR8 244 aa11.22□□□□□ -0.61
CTCFL-217ENST00000608425 COLEC11Q9BWP8 271 aa11.22□□□□□ -0.61
CTCFL-217ENST00000608425 FXYD6Q9H0Q3 95 aa11.22□□□□□ -0.61
CTCFL-217ENST00000608425 NSUN3Q9H649 340 aaKnown RBP11.22□□□□□ -0.61
CTCFL-217ENST00000608425 GAREM1Q9H706 876 aa11.22□□□□□ -0.61
CTCFL-217ENST00000608425 DDIT4Q9NX09 232 aa11.22□□□□□ -0.61
CTCFL-217ENST00000608425 URADA6NGE7 173 aa11.21□□□□□ -0.61
CTCFL-217ENST00000608425 ARHGEF33A8MVX0 844 aa11.21□□□□□ -0.61
CTCFL-217ENST00000608425 NQO2P16083 231 aa11.21□□□□□ -0.61
CTCFL-217ENST00000608425 ACHEP22303 614 aa11.21□□□□□ -0.61
CTCFL-217ENST00000608425 GPR143P51810 404 aa11.21□□□□□ -0.61
CTCFL-217ENST00000608425 CDC42P60953 191 aa11.21□□□□□ -0.61
CTCFL-217ENST00000608425 KCNJ10P78508 379 aa11.21□□□□□ -0.61
CTCFL-217ENST00000608425 SRSF3P84103 164 aaKnown RBP11.21□□□□□ -0.61
CTCFL-217ENST00000608425 ILKQ13418 452 aa11.21□□□□□ -0.61
CTCFL-217ENST00000608425 IDNKQ5T6J7 187 aa11.21□□□□□ -0.61
CTCFL-217ENST00000608425 DHRS7BQ6IAN0 325 aaPredicted RBP11.21□□□□□ -0.61
CTCFL-217ENST00000608425 TGIF2LXQ8IUE1 241 aa11.21□□□□□ -0.61
CTCFL-217ENST00000608425 DCUN1D3Q8IWE4 304 aa11.21□□□□□ -0.61
CTCFL-217ENST00000608425 CELF5Q8N6W0 485 aaKnown RBP11.21□□□□□ -0.61
CTCFL-217ENST00000608425 PCSK9Q8NBP7 692 aaKnown RBP11.21□□□□□ -0.61
CTCFL-217ENST00000608425 C11orf24Q96F05 449 aaPredicted RBP11.21□□□□□ -0.61
CTCFL-217ENST00000608425 MISP3Q96FF7 219 aa11.21□□□□□ -0.61
CTCFL-217ENST00000608425 GGACTQ9BVM4 153 aa11.21□□□□□ -0.61
CTCFL-217ENST00000608425 ALX4Q9H161 411 aaPredicted RBP11.21□□□□□ -0.61
CTCFL-217ENST00000608425 RHCGQ9UBD6 479 aa11.21□□□□□ -0.61
CTCFL-217ENST00000608425 MYO16Q9Y6X6 1858 aa11.21□□□□□ -0.62
CTCFL-217ENST00000608425 UPK3BL1B0FP48 263 aa11.21□□□□□ -0.62
CTCFL-217ENST00000608425 UPK3BL2E5RIL1 263 aa11.21□□□□□ -0.62
CTCFL-217ENST00000608425 CLDN4O14493 209 aa11.21□□□□□ -0.62
CTCFL-217ENST00000608425 TCAPO15273 167 aa11.21□□□□□ -0.62
CTCFL-217ENST00000608425 SLC7A4O43246 635 aa11.21□□□□□ -0.62
CTCFL-217ENST00000608425 OIP5O43482 229 aa11.21□□□□□ -0.62
CTCFL-217ENST00000608425 LCMT2O60294 686 aaKnown RBP11.21□□□□□ -0.62
CTCFL-217ENST00000608425 PRMT3O60678 531 aa11.21□□□□□ -0.62
CTCFL-217ENST00000608425 B3GAT3O94766 335 aa11.21□□□□□ -0.62
CTCFL-217ENST00000608425 NPR2P20594 1047 aa11.21□□□□□ -0.62
CTCFL-217ENST00000608425 CALCRP30988 508 aa11.21□□□□□ -0.62
CTCFL-217ENST00000608425 ZNF33AQ06730 810 aa11.21□□□□□ -0.62
CTCFL-217ENST00000608425 TGIF1Q15583 401 aa11.21□□□□□ -0.62
CTCFL-217ENST00000608425 METAP1DQ6UB28 335 aaPredicted RBP11.21□□□□□ -0.62
CTCFL-217ENST00000608425 CD300LGQ6UXG3 332 aa11.21□□□□□ -0.62
CTCFL-217ENST00000608425 SLC43A2Q8N370 569 aa11.21□□□□□ -0.62
CTCFL-217ENST00000608425 CAMKVQ8NCB2 501 aa11.21□□□□□ -0.62
CTCFL-217ENST00000608425 FAM46DQ8NEK8 389 aa11.21□□□□□ -0.62
CTCFL-217ENST00000608425 HHIPL1Q96JK4 782 aa11.21□□□□□ -0.62
CTCFL-217ENST00000608425 MOGAT1Q96PD6 335 aa11.21□□□□□ -0.62
CTCFL-217ENST00000608425 EPYCQ99645 322 aa11.21□□□□□ -0.62
CTCFL-217ENST00000608425 TMED9Q9BVK6 235 aa11.21□□□□□ -0.62
CTCFL-217ENST00000608425 SPATA5L1Q9BVQ7 753 aa11.21□□□□□ -0.62
CTCFL-217ENST00000608425 UNKLQ9H9P5 680 aaKnown RBP11.21□□□□□ -0.62
CTCFL-217ENST00000608425 TBC1D17Q9HA65 648 aa11.21□□□□□ -0.62
CTCFL-217ENST00000608425 SLC25A19Q9HC21 320 aa11.21□□□□□ -0.62
CTCFL-217ENST00000608425 TREM2Q9NZC2 230 aa11.21□□□□□ -0.62
CTCFL-217ENST00000608425 SF3B6Q9Y3B4 125 aaKnown RBP11.21□□□□□ -0.62
CTCFL-217ENST00000608425 TYMPP19971 482 aa11.2□□□□□ -0.62
CTCFL-217ENST00000608425 CCL23P55773 120 aa11.2□□□□□ -0.62
CTCFL-217ENST00000608425 SPIBQ01892 262 aa11.2□□□□□ -0.62
CTCFL-217ENST00000608425 PRKCZQ05513 592 aa11.2□□□□□ -0.62
CTCFL-217ENST00000608425 ABHD18Q0P651 414 aa11.2□□□□□ -0.62
CTCFL-217ENST00000608425 C18orf63Q68DL7 685 aa11.2□□□□□ -0.62
CTCFL-217ENST00000608425 CTU1Q7Z7A3 348 aaKnown RBP11.2□□□□□ -0.62
CTCFL-217ENST00000608425 LAPTM4BQ86VI4 370 aa11.2□□□□□ -0.62
CTCFL-217ENST00000608425 SLC30A8Q8IWU4 369 aa11.2□□□□□ -0.62
CTCFL-217ENST00000608425 TMEM41AQ96HV5 264 aa11.2□□□□□ -0.62
CTCFL-217ENST00000608425 SUSD3Q96L08 255 aa11.2□□□□□ -0.62
CTCFL-217ENST00000608425 PPP3R2Q96LZ3 170 aa11.2□□□□□ -0.62
CTCFL-217ENST00000608425 FSD1LQ9BXM9 530 aa11.2□□□□□ -0.62
CTCFL-217ENST00000608425 TLNRD1Q9H1K6 362 aa11.2□□□□□ -0.62
CTCFL-217ENST00000608425 BARX1Q9HBU1 254 aaPredicted RBP11.2□□□□□ -0.62
CTCFL-217ENST00000608425 ZFP57Q9NU63 452 aa11.2□□□□□ -0.62
CTCFL-217ENST00000608425 TEX10Q9NXF1 929 aaPredicted RBP11.2□□□□□ -0.62
CTCFL-217ENST00000608425 RPS6KB2Q9UBS0 482 aa11.2□□□□□ -0.62
CTCFL-217ENST00000608425 NEU3Q9UQ49 428 aa11.2□□□□□ -0.62
CTCFL-217ENST00000608425 CA5BQ9Y2D0 317 aa11.2□□□□□ -0.62
CTCFL-217ENST00000608425 MYO10Q9HD67 2058 aa11.2□□□□□ -0.62
CTCFL-217ENST00000608425 A0A0C4DFX4 3053 aa11.2□□□□□ -0.62
CTCFL-217ENST00000608425 CD8B2A6NJW9 211 aa11.2□□□□□ -0.62
CTCFL-217ENST00000608425 SUV39H1O43463 412 aa11.2□□□□□ -0.62
CTCFL-217ENST00000608425 TSPAN3O60637 253 aa11.2□□□□□ -0.62
CTCFL-217ENST00000608425 KCNK5O95279 499 aa11.2□□□□□ -0.62
CTCFL-217ENST00000608425 IGLV3-25P01717 112 aa11.2□□□□□ -0.62
CTCFL-217ENST00000608425 WNT1P04628 370 aa11.2□□□□□ -0.62
CTCFL-217ENST00000608425 CD8BP10966 210 aa11.2□□□□□ -0.62
CTCFL-217ENST00000608425 FDXRP22570 491 aa11.2□□□□□ -0.62
CTCFL-217ENST00000608425 TOMM20Q15388 145 aa11.2□□□□□ -0.62
CTCFL-217ENST00000608425 VMACQ2NL98 169 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms