RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 SDHDO14521 159 aa10.04□□□□□ -0.8
SHKBP1-206ENST00000595523 PRRG2O14669 202 aa10.04□□□□□ -0.8
SHKBP1-206ENST00000595523 ANKRD28O15084 1053 aa10.04□□□□□ -0.8
SHKBP1-206ENST00000595523 SUSD5O60279 629 aa10.04□□□□□ -0.8
SHKBP1-206ENST00000595523 ICOSLGO75144 302 aa10.04□□□□□ -0.8
SHKBP1-206ENST00000595523 SNX4O95219 450 aa10.04□□□□□ -0.8
SHKBP1-206ENST00000595523 PRPS1L1P21108 318 aa10.04□□□□□ -0.8
SHKBP1-206ENST00000595523 PTPN6P29350 595 aa10.04□□□□□ -0.8
SHKBP1-206ENST00000595523 GPC1P35052 558 aa10.04□□□□□ -0.8
SHKBP1-206ENST00000595523 MANFP55145 182 aaKnown RBP10.04□□□□□ -0.8
SHKBP1-206ENST00000595523 CASP6P55212 293 aa10.04□□□□□ -0.8
SHKBP1-206ENST00000595523 CLDN8P56748 225 aa10.04□□□□□ -0.8
SHKBP1-206ENST00000595523 RPP38P78345 283 aaKnown RBP10.04□□□□□ -0.8
SHKBP1-206ENST00000595523 SNTA1Q13424 505 aa10.04□□□□□ -0.8
SHKBP1-206ENST00000595523 GAB1Q13480 694 aa10.04□□□□□ -0.8
SHKBP1-206ENST00000595523 SLC10A1Q14973 349 aa10.04□□□□□ -0.8
SHKBP1-206ENST00000595523 MLC1Q15049 377 aa10.04□□□□□ -0.8
SHKBP1-206ENST00000595523 CDSNQ15517 529 aa10.04□□□□□ -0.8
SHKBP1-206ENST00000595523 TMEM198Q66K66 360 aa10.04□□□□□ -0.8
SHKBP1-206ENST00000595523 SLC30A6Q6NXT4 461 aa10.04□□□□□ -0.8
SHKBP1-206ENST00000595523 LARP4Q71RC2 724 aaKnown RBP eCLIP10.04□□□□□ -0.8
SHKBP1-206ENST00000595523 MAMDC2Q7Z304 686 aaPredicted RBP10.04□□□□□ -0.8
SHKBP1-206ENST00000595523 MAVSQ7Z434 540 aa10.04□□□□□ -0.8
SHKBP1-206ENST00000595523 CAMKMTQ7Z624 323 aa10.04□□□□□ -0.8
SHKBP1-206ENST00000595523 RPRMLQ8N4K4 120 aa10.04□□□□□ -0.8
SHKBP1-206ENST00000595523 WDSUB1Q8N9V3 476 aa10.04□□□□□ -0.8
SHKBP1-206ENST00000595523 ZFP28Q8NHY6 868 aa10.04□□□□□ -0.8
SHKBP1-206ENST00000595523 PSMA8Q8TAA3 256 aa10.04□□□□□ -0.8
SHKBP1-206ENST00000595523 RAB3IL1Q8TBN0 382 aa10.04□□□□□ -0.8
SHKBP1-206ENST00000595523 FAM120BQ96EK7 910 aaKnown RBP10.04□□□□□ -0.8
SHKBP1-206ENST00000595523 ATP6V1G3Q96LB4 118 aa10.04□□□□□ -0.8
SHKBP1-206ENST00000595523 GNRHR2Q96P88 292 aa10.04□□□□□ -0.8
SHKBP1-206ENST00000595523 OSBPL11Q9BXB4 747 aa10.04□□□□□ -0.8
SHKBP1-206ENST00000595523 SLC6A15Q9H2J7 730 aa10.04□□□□□ -0.8
SHKBP1-206ENST00000595523 ACKR4Q9NPB9 350 aa10.04□□□□□ -0.8
SHKBP1-206ENST00000595523 EQTNQ9NQ60 294 aa10.04□□□□□ -0.8
SHKBP1-206ENST00000595523 PNPLA3Q9NST1 481 aa10.04□□□□□ -0.8
SHKBP1-206ENST00000595523 THAP1Q9NVV9 213 aa10.04□□□□□ -0.8
SHKBP1-206ENST00000595523 QPCTLQ9NXS2 382 aa10.04□□□□□ -0.8
SHKBP1-206ENST00000595523 NKIRAS1Q9NYS0 192 aa10.04□□□□□ -0.8
SHKBP1-206ENST00000595523 NOP53Q9NZM5 478 aaKnown RBP10.04□□□□□ -0.8
SHKBP1-206ENST00000595523 FLRT3Q9NZU0 649 aa10.04□□□□□ -0.8
SHKBP1-206ENST00000595523 MARCOQ9UEW3 520 aaPredicted RBP10.04□□□□□ -0.8
SHKBP1-206ENST00000595523 EIF3LQ9Y262 564 aaKnown RBP10.04□□□□□ -0.8
SHKBP1-206ENST00000595523 C15orf41Q9Y2V0 281 aa10.04□□□□□ -0.8
SHKBP1-206ENST00000595523 FBN2P35556 2912 aa10.04□□□□□ -0.8
SHKBP1-206ENST00000595523 TRGV5A0A0B4J1U4 118 aa10.03□□□□□ -0.8
SHKBP1-206ENST00000595523 A0A1W2PRB8 838 aa10.03□□□□□ -0.8
SHKBP1-206ENST00000595523 GXYLT2A0PJZ3 443 aa10.03□□□□□ -0.8
SHKBP1-206ENST00000595523 NPIPA2E9PIF3 369 aa10.03□□□□□ -0.8
SHKBP1-206ENST00000595523 E9PLN8 166 aa10.03□□□□□ -0.8
SHKBP1-206ENST00000595523 NPIPA3F8WFD2 350 aa10.03□□□□□ -0.8
SHKBP1-206ENST00000595523 GNB5O14775 395 aa10.03□□□□□ -0.8
SHKBP1-206ENST00000595523 SNPHO15079 494 aa10.03□□□□□ -0.8
SHKBP1-206ENST00000595523 HCN1O60741 890 aa10.03□□□□□ -0.8
SHKBP1-206ENST00000595523 ABCB7O75027 752 aa10.03□□□□□ -0.8
SHKBP1-206ENST00000595523 SASH3O75995 380 aa10.03□□□□□ -0.8
SHKBP1-206ENST00000595523 IGKV1D-16P01601 117 aa10.03□□□□□ -0.8
SHKBP1-206ENST00000595523 HPNP05981 417 aa10.03□□□□□ -0.8
SHKBP1-206ENST00000595523 ALDOCP09972 364 aaKnown RBP10.03□□□□□ -0.8
SHKBP1-206ENST00000595523 ACP2P11117 423 aa10.03□□□□□ -0.8
SHKBP1-206ENST00000595523 CYP4B1P13584 511 aa10.03□□□□□ -0.8
SHKBP1-206ENST00000595523 GDF1P27539 372 aa10.03□□□□□ -0.8
SHKBP1-206ENST00000595523 COL8A1P27658 744 aa10.03□□□□□ -0.8
SHKBP1-206ENST00000595523 IL12BP29460 328 aa10.03□□□□□ -0.8
SHKBP1-206ENST00000595523 RPL3P39023 403 aaKnown RBP10.03□□□□□ -0.8
SHKBP1-206ENST00000595523 TRPC1P48995 793 aa10.03□□□□□ -0.8
SHKBP1-206ENST00000595523 MAN2A2P49641 1150 aa10.03□□□□□ -0.8
SHKBP1-206ENST00000595523 PNLIPRP2P54317 469 aa10.03□□□□□ -0.8
SHKBP1-206ENST00000595523 GAS1P54826 345 aa10.03□□□□□ -0.8
SHKBP1-206ENST00000595523 WNT3P56703 355 aa10.03□□□□□ -0.8
SHKBP1-206ENST00000595523 PSPHP78330 225 aa10.03□□□□□ -0.8
SHKBP1-206ENST00000595523 MAD2L1Q13257 205 aaPredicted RBP10.03□□□□□ -0.8
SHKBP1-206ENST00000595523 EFR3AQ14156 821 aa10.03□□□□□ -0.8
SHKBP1-206ENST00000595523 CYP27C1Q4G0S4 372 aa10.03□□□□□ -0.8
SHKBP1-206ENST00000595523 CPTPQ5TA50 214 aa10.03□□□□□ -0.8
SHKBP1-206ENST00000595523 TIGD3Q6B0B8 471 aa10.03□□□□□ -0.8
SHKBP1-206ENST00000595523 OGFOD2Q6N063 350 aa10.03□□□□□ -0.8
SHKBP1-206ENST00000595523 MFSD12Q6NUT3 480 aa10.03□□□□□ -0.8
SHKBP1-206ENST00000595523 PAOXQ6QHF9 649 aa10.03□□□□□ -0.8
SHKBP1-206ENST00000595523 ANGPTL8Q6UXH0 198 aa10.03□□□□□ -0.8
SHKBP1-206ENST00000595523 PACS2Q86VP3 889 aa10.03□□□□□ -0.8
SHKBP1-206ENST00000595523 WDR75Q8IWA0 830 aaKnown RBP10.03□□□□□ -0.8
SHKBP1-206ENST00000595523 LRRC34Q8IZ02 419 aa10.03□□□□□ -0.8
SHKBP1-206ENST00000595523 KIRREL3Q8IZU9 778 aa10.03□□□□□ -0.8
SHKBP1-206ENST00000595523 NUP43Q8NFH3 380 aa10.03□□□□□ -0.8
SHKBP1-206ENST00000595523 FBXO30Q8TB52 745 aa10.03□□□□□ -0.8
SHKBP1-206ENST00000595523 PIK3R3Q92569 461 aa10.03□□□□□ -0.8
SHKBP1-206ENST00000595523 MS4A4EQ96PG1 132 aa10.03□□□□□ -0.8
SHKBP1-206ENST00000595523 VKORC1Q9BQB6 163 aa10.03□□□□□ -0.8
SHKBP1-206ENST00000595523 RTN4RQ9BZR6 473 aa10.03□□□□□ -0.8
SHKBP1-206ENST00000595523 CXorf36Q9H7Y0 433 aa10.03□□□□□ -0.8
SHKBP1-206ENST00000595523 MANSC1Q9H8J5 431 aa10.03□□□□□ -0.8
SHKBP1-206ENST00000595523 KLRF1Q9NZS2 232 aa10.03□□□□□ -0.8
SHKBP1-206ENST00000595523 SUCOQ9UBS9 1254 aaKnown RBP10.03□□□□□ -0.8
SHKBP1-206ENST00000595523 B4GALT7Q9UBV7 327 aa10.03□□□□□ -0.8
SHKBP1-206ENST00000595523 CBLCQ9ULV8 474 aa10.03□□□□□ -0.8
SHKBP1-206ENST00000595523 MAPRE3Q9UPY8 281 aa10.03□□□□□ -0.8
SHKBP1-206ENST00000595523 OR10H1Q9Y4A9 318 aa10.03□□□□□ -0.8
SHKBP1-206ENST00000595523 WIF1Q9Y5W5 379 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms