RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 DDX5P17844 614 aaKnown RBP16.03■□□□□ 0.16
SHKBP1-203ENST00000594298 BGNP21810 368 aa16.03■□□□□ 0.16
SHKBP1-203ENST00000594298 DNASE1P24855 282 aa16.03■□□□□ 0.16
SHKBP1-203ENST00000594298 ASMTP46597 345 aa16.03■□□□□ 0.16
SHKBP1-203ENST00000594298 CDK9P50750 372 aaKnown RBP16.03■□□□□ 0.16
SHKBP1-203ENST00000594298 SF3B4Q15427 424 aaKnown RBP eCLIP16.03■□□□□ 0.161e-6■■■■■ 60
SHKBP1-203ENST00000594298 CEBPEQ15744 281 aa16.03■□□□□ 0.16
SHKBP1-203ENST00000594298 GALNTL6Q49A17 601 aa16.03■□□□□ 0.16
SHKBP1-203ENST00000594298 ATP6AP1LQ52LC2 224 aa16.03■□□□□ 0.16
SHKBP1-203ENST00000594298 NHSL2Q5HYW2 709 aa16.03■□□□□ 0.16
SHKBP1-203ENST00000594298 NSUN5P2Q63ZY6 315 aa16.03■□□□□ 0.16
SHKBP1-203ENST00000594298 ATG16L1Q676U5 607 aa16.03■□□□□ 0.16
SHKBP1-203ENST00000594298 FAM71E1Q6IPT2 247 aa16.03■□□□□ 0.16
SHKBP1-203ENST00000594298 OR2T11Q8NH01 316 aa16.03■□□□□ 0.16
SHKBP1-203ENST00000594298 GOT1L1Q8NHS2 421 aaPredicted RBP16.03■□□□□ 0.16
SHKBP1-203ENST00000594298 EXOSC8Q96B26 276 aaKnown RBP16.03■□□□□ 0.16
SHKBP1-203ENST00000594298 NTNG2Q96CW9 530 aa16.03■□□□□ 0.16
SHKBP1-203ENST00000594298 CNRIP1Q96F85 164 aaPredicted RBP16.03■□□□□ 0.16
SHKBP1-203ENST00000594298 ZNF681Q96N22 645 aa16.03■□□□□ 0.16
SHKBP1-203ENST00000594298 BBS4Q96RK4 519 aa16.03■□□□□ 0.16
SHKBP1-203ENST00000594298 ANGPTL4Q9BY76 406 aa16.03■□□□□ 0.16
SHKBP1-203ENST00000594298 BRINP2Q9C0B6 783 aa16.03■□□□□ 0.16
SHKBP1-203ENST00000594298 PTGDR2Q9Y5Y4 395 aa16.03■□□□□ 0.16
SHKBP1-203ENST00000594298 EML6Q6ZMW3 1958 aa16.02■□□□□ 0.16
SHKBP1-203ENST00000594298 A0A1W2PS29 197 aa16.02■□□□□ 0.16
SHKBP1-203ENST00000594298 ITM2AO43736 263 aa16.02■□□□□ 0.16
SHKBP1-203ENST00000594298 IL2RAP01589 272 aa16.02■□□□□ 0.16
SHKBP1-203ENST00000594298 HOXB4P17483 251 aaPredicted RBP16.02■□□□□ 0.16
SHKBP1-203ENST00000594298 SSTR4P31391 388 aa16.02■□□□□ 0.16
SHKBP1-203ENST00000594298 ARRB2P32121 409 aa16.02■□□□□ 0.16
SHKBP1-203ENST00000594298 TMED10P49755 219 aaKnown RBP16.02■□□□□ 0.16
SHKBP1-203ENST00000594298 RPL14P50914 215 aaKnown RBP16.02■□□□□ 0.16
SHKBP1-203ENST00000594298 ZNF136P52737 540 aa16.02■□□□□ 0.16
SHKBP1-203ENST00000594298 FBXW4P57775 412 aa16.02■□□□□ 0.16
SHKBP1-203ENST00000594298 RPL38P63173 70 aaKnown RBP16.02■□□□□ 0.16
SHKBP1-203ENST00000594298 PRICKLE4Q2TBC4 344 aa16.02■□□□□ 0.16
SHKBP1-203ENST00000594298 FNDC7Q5VTL7 733 aa16.02■□□□□ 0.16
SHKBP1-203ENST00000594298 VASNQ6EMK4 673 aa16.02■□□□□ 0.16
SHKBP1-203ENST00000594298 CAMKMTQ7Z624 323 aa16.02■□□□□ 0.16
SHKBP1-203ENST00000594298 CCDC116Q8IYX3 515 aa16.02■□□□□ 0.16
SHKBP1-203ENST00000594298 VWA5B2Q8N398 1253 aa16.02■□□□□ 0.16
SHKBP1-203ENST00000594298 C17orf47Q8NEP4 570 aa16.02■□□□□ 0.16
SHKBP1-203ENST00000594298 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.02■□□□□ 0.16
SHKBP1-203ENST00000594298 RAB3IL1Q8TBN0 382 aa16.02■□□□□ 0.16
SHKBP1-203ENST00000594298 MGARPQ8TDB4 240 aa16.02■□□□□ 0.16
SHKBP1-203ENST00000594298 ERP27Q96DN0 273 aa16.02■□□□□ 0.16
SHKBP1-203ENST00000594298 HSPBAP1Q96EW2 488 aa16.02■□□□□ 0.16
SHKBP1-203ENST00000594298 FCRL1Q96LA6 429 aa16.02■□□□□ 0.16
SHKBP1-203ENST00000594298 OR10A5Q9H207 317 aa16.02■□□□□ 0.16
SHKBP1-203ENST00000594298 DLL4Q9NR61 685 aa16.02■□□□□ 0.16
SHKBP1-203ENST00000594298 TAS2R7Q9NYW3 318 aa16.02■□□□□ 0.16
SHKBP1-203ENST00000594298 PLEKHA6Q9Y2H5 1048 aa16.02■□□□□ 0.16
SHKBP1-203ENST00000594298 C15orf41Q9Y2V0 281 aa16.02■□□□□ 0.16
SHKBP1-203ENST00000594298 NPFFR2Q9Y5X5 522 aa16.02■□□□□ 0.16
SHKBP1-203ENST00000594298 CD8B2A6NJW9 211 aa16.01■□□□□ 0.15
SHKBP1-203ENST00000594298 KDM4EB2RXH2 506 aaPredicted RBP16.01■□□□□ 0.15
SHKBP1-203ENST00000594298 PEX11AO75192 247 aa16.01■□□□□ 0.15
SHKBP1-203ENST00000594298 SKAP2O75563 359 aaPredicted RBP16.01■□□□□ 0.15
SHKBP1-203ENST00000594298 LYPLA1O75608 230 aaPredicted RBP16.01■□□□□ 0.15
SHKBP1-203ENST00000594298 WDR4P57081 412 aaKnown RBP16.01■□□□□ 0.15
SHKBP1-203ENST00000594298 MAD2L1Q13257 205 aaPredicted RBP16.01■□□□□ 0.15
SHKBP1-203ENST00000594298 RFTN2Q52LD8 501 aaPredicted RBP16.01■□□□□ 0.15
SHKBP1-203ENST00000594298 XKR7Q5GH72 579 aa16.01■□□□□ 0.15
SHKBP1-203ENST00000594298 TMEM64Q6YI46 380 aa16.01■□□□□ 0.15
SHKBP1-203ENST00000594298 PACS2Q86VP3 889 aa16.01■□□□□ 0.15
SHKBP1-203ENST00000594298 FAM9CQ8IZT9 166 aa16.01■□□□□ 0.15
SHKBP1-203ENST00000594298 ZNF615Q8N8J6 731 aa16.01■□□□□ 0.15
SHKBP1-203ENST00000594298 ZNF675Q8TD23 568 aa16.01■□□□□ 0.15
SHKBP1-203ENST00000594298 ADIPOR1Q96A54 375 aa16.01■□□□□ 0.15
SHKBP1-203ENST00000594298 TUBGCP3Q96CW5 907 aa16.01■□□□□ 0.15
SHKBP1-203ENST00000594298 TMEM41AQ96HV5 264 aa16.01■□□□□ 0.15
SHKBP1-203ENST00000594298 ATP6V1G3Q96LB4 118 aa16.01■□□□□ 0.15
SHKBP1-203ENST00000594298 RILPQ96NA2 401 aa16.01■□□□□ 0.15
SHKBP1-203ENST00000594298 GNRHR2Q96P88 292 aa16.01■□□□□ 0.15
SHKBP1-203ENST00000594298 MAT2BQ9NZL9 334 aa16.01■□□□□ 0.15
SHKBP1-203ENST00000594298 PRODH2Q9UF12 536 aa16.01■□□□□ 0.15
SHKBP1-203ENST00000594298 BCAP29Q9UHQ4 241 aa16.01■□□□□ 0.15
SHKBP1-203ENST00000594298 ITPR3Q14573 2671 aa16■□□□□ 0.15
SHKBP1-203ENST00000594298 MBD3L4A6NDZ8 208 aaPredicted RBP16■□□□□ 0.15
SHKBP1-203ENST00000594298 MBD3L3A6NE82 208 aaPredicted RBP16■□□□□ 0.15
SHKBP1-203ENST00000594298 MBD3L5A6NJ08 208 aaPredicted RBP16■□□□□ 0.15
SHKBP1-203ENST00000594298 TRAPPC6AO75865 159 aa16■□□□□ 0.15
SHKBP1-203ENST00000594298 SLITRK5O94991 958 aa16■□□□□ 0.15
SHKBP1-203ENST00000594298 GOSR1O95249 250 aa16■□□□□ 0.15
SHKBP1-203ENST00000594298 CT62P0C5K7 136 aa16■□□□□ 0.15
SHKBP1-203ENST00000594298 PRPS2P11908 318 aa16■□□□□ 0.15
SHKBP1-203ENST00000594298 FOSL1P15407 271 aa16■□□□□ 0.15
SHKBP1-203ENST00000594298 NTSP30990 170 aa16■□□□□ 0.15
SHKBP1-203ENST00000594298 RPL3P39023 403 aaKnown RBP16■□□□□ 0.15
SHKBP1-203ENST00000594298 CASP3P42574 277 aa16■□□□□ 0.15
SHKBP1-203ENST00000594298 WNT3P56703 355 aa16■□□□□ 0.15
SHKBP1-203ENST00000594298 NRG3P56975 720 aa16■□□□□ 0.15
SHKBP1-203ENST00000594298 RPP38P78345 283 aaKnown RBP16■□□□□ 0.15
SHKBP1-203ENST00000594298 SORDQ00796 357 aa16■□□□□ 0.15
SHKBP1-203ENST00000594298 MGAT2Q10469 447 aa16■□□□□ 0.15
SHKBP1-203ENST00000594298 BST1Q10588 318 aa16■□□□□ 0.15
SHKBP1-203ENST00000594298 FOXD4Q12950 439 aaPredicted RBP16■□□□□ 0.15
SHKBP1-203ENST00000594298 SMU1Q2TAY7 513 aa16■□□□□ 0.15
SHKBP1-203ENST00000594298 BICRALQ6AI39 1079 aa16■□□□□ 0.15
SHKBP1-203ENST00000594298 FAM111BQ6SJ93 734 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms