RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 CPSF4LA6NMK7 179 aaKnown RBP15.49■□□□□ 0.07
LIG1-206ENST00000594067 SLC30A4O14863 429 aa15.49■□□□□ 0.07
LIG1-206ENST00000594067 EFCAB14O75071 495 aa15.49■□□□□ 0.07
LIG1-206ENST00000594067 CLEC3AO75596 197 aa15.49■□□□□ 0.07
LIG1-206ENST00000594067 TIMP1P01033 207 aa15.49■□□□□ 0.07
LIG1-206ENST00000594067 PSKH1P11801 424 aa15.49■□□□□ 0.07
LIG1-206ENST00000594067 GSTM3P21266 225 aa15.49■□□□□ 0.07
LIG1-206ENST00000594067 FABP5Q01469 135 aa15.49■□□□□ 0.07
LIG1-206ENST00000594067 SIGIRRQ6IA17 410 aa15.49■□□□□ 0.07
LIG1-206ENST00000594067 ANKK1Q8NFD2 765 aa15.49■□□□□ 0.07
LIG1-206ENST00000594067 ANGPTL6Q8NI99 470 aa15.49■□□□□ 0.07
LIG1-206ENST00000594067 DEDD2Q8WXF8 326 aa15.49■□□□□ 0.07
LIG1-206ENST00000594067 UFD1Q92890 307 aa15.49■□□□□ 0.07
LIG1-206ENST00000594067 FAM46AQ96IP4 442 aaKnown RBP15.49■□□□□ 0.07
LIG1-206ENST00000594067 C12orf66Q96MD2 445 aa15.49■□□□□ 0.07
LIG1-206ENST00000594067 CITED4Q96RK1 184 aa15.49■□□□□ 0.07
LIG1-206ENST00000594067 INSM2Q96T92 566 aaPredicted RBP15.49■□□□□ 0.07
LIG1-206ENST00000594067 FAIM2Q9BWQ8 316 aa15.49■□□□□ 0.07
LIG1-206ENST00000594067 NIPAL2Q9H841 368 aa15.49■□□□□ 0.07
LIG1-206ENST00000594067 FGF20Q9NP95 211 aaPredicted RBP15.49■□□□□ 0.07
LIG1-206ENST00000594067 EQTNQ9NQ60 294 aa15.49■□□□□ 0.07
LIG1-206ENST00000594067 COMMD3Q9UBI1 195 aa15.49■□□□□ 0.07
LIG1-206ENST00000594067 ATG4BQ9Y4P1 393 aa15.49■□□□□ 0.07
LIG1-206ENST00000594067 OR1A2Q9Y585 309 aa15.49■□□□□ 0.07
LIG1-206ENST00000594067 CLCA3PQ9Y6N3 262 aa15.49■□□□□ 0.07
LIG1-206ENST00000594067 ERI3O43414 337 aaKnown RBP15.48■□□□□ 0.07
LIG1-206ENST00000594067 AKR7A2O43488 359 aa15.48■□□□□ 0.07
LIG1-206ENST00000594067 UBXN7O94888 489 aa15.48■□□□□ 0.07
LIG1-206ENST00000594067 C1QBP02746 253 aa15.48■□□□□ 0.07
LIG1-206ENST00000594067 SLC2A2P11168 524 aaPredicted RBP15.48■□□□□ 0.07
LIG1-206ENST00000594067 CTNNB1P35222 781 aa15.48■□□□□ 0.07
LIG1-206ENST00000594067 BCL6P41182 706 aa15.48■□□□□ 0.07
LIG1-206ENST00000594067 TRA2BP62995 288 aaKnown RBP15.48■□□□□ 0.07
LIG1-206ENST00000594067 TPBGQ13641 420 aa15.48■□□□□ 0.07
LIG1-206ENST00000594067 SLC9A5Q14940 896 aa15.48■□□□□ 0.07
LIG1-206ENST00000594067 P2RY14Q15391 338 aa15.48■□□□□ 0.07
LIG1-206ENST00000594067 WSCD2Q2TBF2 565 aa15.48■□□□□ 0.07
LIG1-206ENST00000594067 QSOX2Q6ZRP7 698 aa15.48■□□□□ 0.07
LIG1-206ENST00000594067 VRK2Q86Y07 508 aa15.48■□□□□ 0.07
LIG1-206ENST00000594067 Q8N402 240 aa15.48■□□□□ 0.07
LIG1-206ENST00000594067 CNRIP1Q96F85 164 aaPredicted RBP15.48■□□□□ 0.07
LIG1-206ENST00000594067 SEMA4GQ9NTN9 838 aa15.48■□□□□ 0.07
LIG1-206ENST00000594067 MALT1Q9UDY8 824 aa15.48■□□□□ 0.07
LIG1-206ENST00000594067 GOLGA4Q13439 2230 aaKnown RBP15.48■□□□□ 0.07
LIG1-206ENST00000594067 A0A1W2PR48 441 aa15.48■□□□□ 0.07
LIG1-206ENST00000594067 TMEM129A0AVI4 362 aa15.48■□□□□ 0.07
LIG1-206ENST00000594067 HCN1O60741 890 aa15.48■□□□□ 0.07
LIG1-206ENST00000594067 CRYZL1O95825 349 aa15.48■□□□□ 0.07
LIG1-206ENST00000594067 LALBAP00709 142 aa15.48■□□□□ 0.07
LIG1-206ENST00000594067 LIMS3P0CW19 117 aa15.48■□□□□ 0.07
LIG1-206ENST00000594067 LIMS4P0CW20 117 aa15.48■□□□□ 0.07
LIG1-206ENST00000594067 ACP5P13686 325 aa15.48■□□□□ 0.07
LIG1-206ENST00000594067 UBE3AQ05086 875 aa15.48■□□□□ 0.07
LIG1-206ENST00000594067 PRDX1Q06830 199 aaKnown RBP15.48■□□□□ 0.07
LIG1-206ENST00000594067 MLF2Q15773 248 aaPredicted RBP15.48■□□□□ 0.07
LIG1-206ENST00000594067 ZNF311Q5JNZ3 666 aa15.48■□□□□ 0.07
LIG1-206ENST00000594067 C18orf63Q68DL7 685 aa15.48■□□□□ 0.07
LIG1-206ENST00000594067 C19orf18Q8NEA5 215 aa15.48■□□□□ 0.07
LIG1-206ENST00000594067 OR4M1Q8NGD0 313 aa15.48■□□□□ 0.07
LIG1-206ENST00000594067 GNPDA2Q8TDQ7 276 aa15.48■□□□□ 0.07
LIG1-206ENST00000594067 AP3S1Q92572 193 aa15.48■□□□□ 0.07
LIG1-206ENST00000594067 PINK1Q9BXM7 581 aa15.48■□□□□ 0.07
LIG1-206ENST00000594067 IMP3Q9NV31 184 aaKnown RBP15.48■□□□□ 0.07
LIG1-206ENST00000594067 NLKQ9UBE8 527 aa15.48■□□□□ 0.07
LIG1-206ENST00000594067 C5orf42Q9H799 3197 aa15.47■□□□□ 0.07
LIG1-206ENST00000594067 A0A0G2JPF8 293 aa15.47■□□□□ 0.07
LIG1-206ENST00000594067 HNRNPCL2B2RXH8 293 aa15.47■□□□□ 0.07
LIG1-206ENST00000594067 HNRNPCL3B7ZW38 293 aa15.47■□□□□ 0.07
LIG1-206ENST00000594067 PROM1O43490 865 aa15.47■□□□□ 0.07
LIG1-206ENST00000594067 TRIM3O75382 744 aaPredicted RBP15.47■□□□□ 0.07
LIG1-206ENST00000594067 HNRNPCL4P0DMR1 293 aa15.47■□□□□ 0.07
LIG1-206ENST00000594067 MINDY4Q4G0A6 757 aa15.47■□□□□ 0.07
LIG1-206ENST00000594067 CNIH2Q6PI25 160 aa15.47■□□□□ 0.07
LIG1-206ENST00000594067 OR4F15Q8NGB8 312 aa15.47■□□□□ 0.07
LIG1-206ENST00000594067 OR2A1Q8NGT9 310 aa15.47■□□□□ 0.07
LIG1-206ENST00000594067 DCLRE1CQ96SD1 692 aaKnown RBP15.47■□□□□ 0.07
LIG1-206ENST00000594067 B3GAT2Q9NPZ5 323 aa15.47■□□□□ 0.07
LIG1-206ENST00000594067 MBNL1Q9NR56 388 aaKnown RBP15.47■□□□□ 0.07
LIG1-206ENST00000594067 MRPS18AQ9NVS2 196 aaKnown RBP15.47■□□□□ 0.07
LIG1-206ENST00000594067 NTNG1Q9Y2I2 539 aa15.47■□□□□ 0.07
LIG1-206ENST00000594067 OR3A3P47888 321 aa15.47■□□□□ 0.07
LIG1-206ENST00000594067 PPP3R1P63098 170 aa15.47■□□□□ 0.07
LIG1-206ENST00000594067 GAB4Q2WGN9 574 aa15.47■□□□□ 0.07
LIG1-206ENST00000594067 LAMTOR1Q6IAA8 161 aa15.47■□□□□ 0.07
LIG1-206ENST00000594067 UPRTQ96BW1 309 aa15.47■□□□□ 0.07
LIG1-206ENST00000594067 PITHD1Q9GZP4 211 aaPredicted RBP15.47■□□□□ 0.07
LIG1-206ENST00000594067 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.47■□□□□ 0.07
LIG1-206ENST00000594067 ASB4Q9Y574 426 aa15.47■□□□□ 0.07
LIG1-206ENST00000594067 PCDHGB7Q9Y5F8 929 aa15.47■□□□□ 0.07
LIG1-206ENST00000594067 SNTNA6NMZ2 147 aa15.46■□□□□ 0.07
LIG1-206ENST00000594067 CASKO14936 926 aa15.46■□□□□ 0.07
LIG1-206ENST00000594067 CASC3O15234 703 aaKnown RBP15.46■□□□□ 0.07
LIG1-206ENST00000594067 ARHGEF9O43307 516 aa15.46■□□□□ 0.07
LIG1-206ENST00000594067 PCDH8O95206 1070 aa15.46■□□□□ 0.07
LIG1-206ENST00000594067 AVPR1BP47901 424 aa15.46■□□□□ 0.07
LIG1-206ENST00000594067 SNRPD2P62316 118 aaKnown RBP15.46■□□□□ 0.07
LIG1-206ENST00000594067 HTRA4P83105 476 aaPredicted RBP15.46■□□□□ 0.07
LIG1-206ENST00000594067 C1orf53Q5VUE5 145 aa15.46■□□□□ 0.07
LIG1-206ENST00000594067 TRIQKQ629K1 86 aa15.46■□□□□ 0.07
LIG1-206ENST00000594067 KIAA1161Q6NSJ0 714 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms