RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 B3GALT1Q9Y5Z6 326 aa12.52□□□□□ -0.41
VMP1-217ENST00000593168 A0A0G2JPF8 293 aa12.51□□□□□ -0.41
VMP1-217ENST00000593168 HNRNPCL2B2RXH8 293 aa12.51□□□□□ -0.41
VMP1-217ENST00000593168 HNRNPCL3B7ZW38 293 aa12.51□□□□□ -0.41
VMP1-217ENST00000593168 PLD2O14939 933 aa12.51□□□□□ -0.41
VMP1-217ENST00000593168 CASQ2O14958 399 aaPredicted RBP12.51□□□□□ -0.41
VMP1-217ENST00000593168 EFSO43281 561 aa12.51□□□□□ -0.41
VMP1-217ENST00000593168 SERPINB7O75635 380 aa12.51□□□□□ -0.41
VMP1-217ENST00000593168 NKX2-2O95096 273 aa12.51□□□□□ -0.41
VMP1-217ENST00000593168 ZNF682O95780 498 aa12.51□□□□□ -0.41
VMP1-217ENST00000593168 AK1P00568 194 aa12.51□□□□□ -0.41
VMP1-217ENST00000593168 HEXBP07686 556 aa12.51□□□□□ -0.41
VMP1-217ENST00000593168 CD63P08962 238 aa12.51□□□□□ -0.41
VMP1-217ENST00000593168 JMJD7P0C870 316 aa12.51□□□□□ -0.41
VMP1-217ENST00000593168 HNRNPCL4P0DMR1 293 aa12.51□□□□□ -0.41
VMP1-217ENST00000593168 ACP2P11117 423 aa12.51□□□□□ -0.41
VMP1-217ENST00000593168 ETS2P15036 469 aa12.51□□□□□ -0.41
VMP1-217ENST00000593168 FASP25445 335 aa12.51□□□□□ -0.41
VMP1-217ENST00000593168 AQP1P29972 269 aa12.51□□□□□ -0.41
VMP1-217ENST00000593168 EMDP50402 254 aa12.51□□□□□ -0.41
VMP1-217ENST00000593168 EMP2P54851 167 aa12.51□□□□□ -0.41
VMP1-217ENST00000593168 DUSP8Q13202 625 aa12.51□□□□□ -0.41
VMP1-217ENST00000593168 SYPL1Q16563 259 aa12.51□□□□□ -0.41
VMP1-217ENST00000593168 DUSP5Q16690 384 aa12.51□□□□□ -0.41
VMP1-217ENST00000593168 MLIPQ5VWP3 458 aa12.51□□□□□ -0.41
VMP1-217ENST00000593168 ENPP6Q6UWR7 440 aa12.51□□□□□ -0.41
VMP1-217ENST00000593168 LRRC74BQ6ZQY2 392 aa12.51□□□□□ -0.41
VMP1-217ENST00000593168 SLC44A2Q8IWA5 706 aaPredicted RBP12.51□□□□□ -0.41
VMP1-217ENST00000593168 PRSS58Q8IYP2 241 aa12.51□□□□□ -0.41
VMP1-217ENST00000593168 LILRA2Q8N149 483 aa12.51□□□□□ -0.41
VMP1-217ENST00000593168 FAM86B1Q8N7N1 296 aa12.51□□□□□ -0.41
VMP1-217ENST00000593168 ZNF615Q8N8J6 731 aa12.51□□□□□ -0.41
VMP1-217ENST00000593168 ANKFN1Q8N957 763 aa12.51□□□□□ -0.41
VMP1-217ENST00000593168 TMEM102Q8N9M5 508 aaPredicted RBP12.51□□□□□ -0.41
VMP1-217ENST00000593168 CHDHQ8NE62 594 aaPredicted RBP12.51□□□□□ -0.41
VMP1-217ENST00000593168 OR14A16Q8NHC5 309 aa12.51□□□□□ -0.41
VMP1-217ENST00000593168 DAZLQ92904 295 aaKnown RBP12.51□□□□□ -0.41
VMP1-217ENST00000593168 MR1Q95460 341 aa12.51□□□□□ -0.41
VMP1-217ENST00000593168 PMEPA1Q969W9 287 aa12.51□□□□□ -0.41
VMP1-217ENST00000593168 TAMM41Q96BW9 452 aa12.51□□□□□ -0.41
VMP1-217ENST00000593168 SLC47A1Q96FL8 570 aa12.51□□□□□ -0.41
VMP1-217ENST00000593168 SENP5Q96HI0 755 aaPredicted RBP12.51□□□□□ -0.41
VMP1-217ENST00000593168 FBXL20Q96IG2 436 aa12.51□□□□□ -0.41
VMP1-217ENST00000593168 ART5Q96L15 291 aa12.51□□□□□ -0.41
VMP1-217ENST00000593168 ZNF607Q96SK3 696 aa12.51□□□□□ -0.41
VMP1-217ENST00000593168 SPSB2Q99619 263 aa12.51□□□□□ -0.41
VMP1-217ENST00000593168 PKP2Q99959 881 aa12.51□□□□□ -0.41
VMP1-217ENST00000593168 TREX2Q9BQ50 279 aaPredicted RBP12.51□□□□□ -0.41
VMP1-217ENST00000593168 DOHHQ9BU89 302 aa12.51□□□□□ -0.41
VMP1-217ENST00000593168 CNPPD1Q9BV87 410 aa12.51□□□□□ -0.41
VMP1-217ENST00000593168 BTBD2Q9BX70 525 aa12.51□□□□□ -0.41
VMP1-217ENST00000593168 ULBP3Q9BZM4 244 aa12.51□□□□□ -0.41
VMP1-217ENST00000593168 OR10A5Q9H207 317 aa12.51□□□□□ -0.41
VMP1-217ENST00000593168 PNO1Q9NRX1 252 aaKnown RBP12.51□□□□□ -0.41
VMP1-217ENST00000593168 PRODH2Q9UF12 536 aa12.51□□□□□ -0.41
VMP1-217ENST00000593168 GPN3Q9UHW5 284 aaPredicted RBP12.51□□□□□ -0.41
VMP1-217ENST00000593168 RIMS3Q9UJD0 308 aa12.51□□□□□ -0.41
VMP1-217ENST00000593168 ERVK-19Q9WJR5 959 aa12.51□□□□□ -0.41
VMP1-217ENST00000593168 CFL2Q9Y281 166 aa12.51□□□□□ -0.41
VMP1-217ENST00000593168 HEMK1Q9Y5R4 338 aaPredicted RBP12.51□□□□□ -0.41
VMP1-217ENST00000593168 KCNE3Q9Y6H6 103 aa12.51□□□□□ -0.41
VMP1-217ENST00000593168 CLCA3PQ9Y6N3 262 aa12.51□□□□□ -0.41
VMP1-217ENST00000593168 BOD1L1Q8NFC6 3051 aa12.51□□□□□ -0.41
VMP1-217ENST00000593168 TMEM229AB2RXF0 380 aa12.5□□□□□ -0.41
VMP1-217ENST00000593168 IDSB3KWA1 339 aa12.5□□□□□ -0.41
VMP1-217ENST00000593168 HRKO00198 91 aa12.5□□□□□ -0.41
VMP1-217ENST00000593168 CNOT3O75175 753 aaKnown RBP12.5□□□□□ -0.41
VMP1-217ENST00000593168 ALOX12BO75342 701 aa12.5□□□□□ -0.41
VMP1-217ENST00000593168 TIPRLO75663 272 aa12.5□□□□□ -0.41
VMP1-217ENST00000593168 CLPSP04118 112 aa12.5□□□□□ -0.41
VMP1-217ENST00000593168 SEMG1P04279 462 aa12.5□□□□□ -0.41
VMP1-217ENST00000593168 IGKV3-11P04433 115 aa12.5□□□□□ -0.41
VMP1-217ENST00000593168 GUSBP08236 651 aa12.5□□□□□ -0.41
VMP1-217ENST00000593168 SSTR4P31391 388 aa12.5□□□□□ -0.41
VMP1-217ENST00000593168 PTDSS1P48651 473 aaKnown RBP12.5□□□□□ -0.41
VMP1-217ENST00000593168 PGDP52209 483 aa12.5□□□□□ -0.41
VMP1-217ENST00000593168 SESN3P58005 492 aa12.5□□□□□ -0.41
VMP1-217ENST00000593168 FUT5Q11128 374 aa12.5□□□□□ -0.41
VMP1-217ENST00000593168 NFATC3Q12968 1075 aa12.5□□□□□ -0.41
VMP1-217ENST00000593168 ZNHIT3Q15649 155 aaPredicted RBP12.5□□□□□ -0.41
VMP1-217ENST00000593168 ARHGAP11BQ3KRB8 267 aa12.5□□□□□ -0.41
VMP1-217ENST00000593168 LINC00303Q3SY05 128 aa12.5□□□□□ -0.41
VMP1-217ENST00000593168 TMEM164Q5U3C3 297 aa12.5□□□□□ -0.41
VMP1-217ENST00000593168 AP1ARQ63HQ0 302 aa12.5□□□□□ -0.41
VMP1-217ENST00000593168 LCN10Q6JVE6 187 aa12.5□□□□□ -0.41
VMP1-217ENST00000593168 FKBP9P1Q75LS8 142 aa12.5□□□□□ -0.41
VMP1-217ENST00000593168 C16orf62Q7Z3J2 963 aa12.5□□□□□ -0.41
VMP1-217ENST00000593168 GALNT10Q86SR1 603 aa12.5□□□□□ -0.41
VMP1-217ENST00000593168 KRT73Q86Y46 540 aa12.5□□□□□ -0.41
VMP1-217ENST00000593168 ARMC8Q8IUR7 673 aa12.5□□□□□ -0.41
VMP1-217ENST00000593168 MORN4Q8NDC4 146 aa12.5□□□□□ -0.41
VMP1-217ENST00000593168 RASSF5Q8WWW0 418 aa12.5□□□□□ -0.41
VMP1-217ENST00000593168 LRTOMTQ8WZ04 291 aa12.5□□□□□ -0.41
VMP1-217ENST00000593168 LZICQ8WZA0 190 aa12.5□□□□□ -0.41
VMP1-217ENST00000593168 SLC9A6Q92581 669 aa12.5□□□□□ -0.41
VMP1-217ENST00000593168 RNF31Q96EP0 1072 aa12.5□□□□□ -0.41
VMP1-217ENST00000593168 OTUB1Q96FW1 271 aaPredicted RBP12.5□□□□□ -0.41
VMP1-217ENST00000593168 VSTM2LQ96N03 204 aa12.5□□□□□ -0.41
VMP1-217ENST00000593168 SPATA5L1Q9BVQ7 753 aa12.5□□□□□ -0.41
VMP1-217ENST00000593168 SPRY4Q9C004 299 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms