RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 IMPG1Q17R60 797 aa12.06□□□□□ -0.48
APOC1-209ENST00000592885 CCDC153Q494R4 210 aa12.06□□□□□ -0.48
APOC1-209ENST00000592885 SPDYAQ5MJ70 313 aa12.06□□□□□ -0.48
APOC1-209ENST00000592885 DESI1Q6ICB0 168 aa12.06□□□□□ -0.48
APOC1-209ENST00000592885 NPSR1Q6W5P4 371 aa12.06□□□□□ -0.48
APOC1-209ENST00000592885 FRMD7Q6ZUT3 714 aa12.06□□□□□ -0.48
APOC1-209ENST00000592885 LARP4Q71RC2 724 aaKnown RBP eCLIP12.06□□□□□ -0.483e-11■■■■■ 28.6
APOC1-209ENST00000592885 HOMEZQ8IX15 550 aa12.06□□□□□ -0.48
APOC1-209ENST00000592885 EIF1ADQ8N9N8 165 aaKnown RBP12.06□□□□□ -0.48
APOC1-209ENST00000592885 C9orf106Q8NAJ2 232 aa12.06□□□□□ -0.48
APOC1-209ENST00000592885 OR7G2Q8NG99 324 aa12.06□□□□□ -0.48
APOC1-209ENST00000592885 GOT1L1Q8NHS2 421 aaPredicted RBP12.06□□□□□ -0.48
APOC1-209ENST00000592885 RDH11Q8TC12 318 aa12.06□□□□□ -0.48
APOC1-209ENST00000592885 KAT2AQ92830 837 aa12.06□□□□□ -0.48
APOC1-209ENST00000592885 SFXN2Q96NB2 322 aa12.06□□□□□ -0.48
APOC1-209ENST00000592885 KCNA7Q96RP8 456 aa12.06□□□□□ -0.48
APOC1-209ENST00000592885 TUBA1CQ9BQE3 449 aa12.06□□□□□ -0.48
APOC1-209ENST00000592885 EBPLQ9BY08 206 aa12.06□□□□□ -0.48
APOC1-209ENST00000592885 PIGMQ9H3S5 423 aa12.06□□□□□ -0.48
APOC1-209ENST00000592885 CLCF1Q9UBD9 225 aa12.06□□□□□ -0.48
APOC1-209ENST00000592885 DKKL1Q9UK85 242 aa12.06□□□□□ -0.48
APOC1-209ENST00000592885 ABCG2Q9UNQ0 655 aa12.06□□□□□ -0.48
APOC1-209ENST00000592885 OR10H1Q9Y4A9 318 aa12.06□□□□□ -0.48
APOC1-209ENST00000592885 TIMM22Q9Y584 194 aa12.06□□□□□ -0.48
APOC1-209ENST00000592885 TTC36A6NLP5 189 aa12.05□□□□□ -0.48
APOC1-209ENST00000592885 CLCA1A8K7I4 914 aa12.05□□□□□ -0.48
APOC1-209ENST00000592885 G3V2L1 256 aa12.05□□□□□ -0.48
APOC1-209ENST00000592885 PLOD2O00469 737 aa12.05□□□□□ -0.48
APOC1-209ENST00000592885 HCRTR2O43614 444 aa12.05□□□□□ -0.48
APOC1-209ENST00000592885 PSMG1O95456 288 aa12.05□□□□□ -0.48
APOC1-209ENST00000592885 EPXP11678 715 aa12.05□□□□□ -0.48
APOC1-209ENST00000592885 ZNF708P17019 499 aa12.05□□□□□ -0.48
APOC1-209ENST00000592885 DNASE1P24855 282 aa12.05□□□□□ -0.48
APOC1-209ENST00000592885 GRK2P25098 689 aa12.05□□□□□ -0.48
APOC1-209ENST00000592885 PCYT1AP49585 367 aa12.05□□□□□ -0.48
APOC1-209ENST00000592885 LHX2P50458 406 aa12.05□□□□□ -0.48
APOC1-209ENST00000592885 NCBP2P52298 156 aaKnown RBP eCLIP12.05□□□□□ -0.48
APOC1-209ENST00000592885 GAS1P54826 345 aa12.05□□□□□ -0.48
APOC1-209ENST00000592885 PSMD4P55036 377 aaKnown RBP12.05□□□□□ -0.48
APOC1-209ENST00000592885 DSCR4P56555 118 aaPredicted RBP12.05□□□□□ -0.48
APOC1-209ENST00000592885 DNAJB13P59910 316 aa12.05□□□□□ -0.48
APOC1-209ENST00000592885 C2orf80Q0P641 193 aa12.05□□□□□ -0.48
APOC1-209ENST00000592885 BCL2A1Q16548 175 aa12.05□□□□□ -0.48
APOC1-209ENST00000592885 CYP27C1Q4G0S4 372 aa12.05□□□□□ -0.48
APOC1-209ENST00000592885 FAM219BQ5XKK7 198 aa12.05□□□□□ -0.48
APOC1-209ENST00000592885 FAM71E1Q6IPT2 247 aa12.05□□□□□ -0.48
APOC1-209ENST00000592885 TRIM46Q7Z4K8 759 aa12.05□□□□□ -0.48
APOC1-209ENST00000592885 CAMKMTQ7Z624 323 aa12.05□□□□□ -0.48
APOC1-209ENST00000592885 CDC20BQ86Y33 519 aa12.05□□□□□ -0.48
APOC1-209ENST00000592885 SLC44A2Q8IWA5 706 aaPredicted RBP12.05□□□□□ -0.48
APOC1-209ENST00000592885 TRIM42Q8IWZ5 723 aa12.05□□□□□ -0.48
APOC1-209ENST00000592885 CCNYL1Q8N7R7 359 aa12.05□□□□□ -0.48
APOC1-209ENST00000592885 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.05□□□□□ -0.48
APOC1-209ENST00000592885 MBD6Q96DN6 1003 aa12.05□□□□□ -0.48
APOC1-209ENST00000592885 ZNF764Q96H86 408 aaPredicted RBP12.05□□□□□ -0.48
APOC1-209ENST00000592885 ALPK1Q96QP1 1244 aa12.05□□□□□ -0.48
APOC1-209ENST00000592885 EPB41L4BQ9H329 900 aa12.05□□□□□ -0.48
APOC1-209ENST00000592885 ANKRA2Q9H9E1 313 aa12.05□□□□□ -0.48
APOC1-209ENST00000592885 RRAGDQ9NQL2 400 aaPredicted RBP12.05□□□□□ -0.48
APOC1-209ENST00000592885 FBXL2Q9UKC9 423 aa12.05□□□□□ -0.48
APOC1-209ENST00000592885 MRTO4Q9UKD2 239 aaKnown RBP12.05□□□□□ -0.48
APOC1-209ENST00000592885 EMCNQ9ULC0 261 aa12.05□□□□□ -0.48
APOC1-209ENST00000592885 C19orf53Q9UNZ5 99 aaPredicted RBP12.05□□□□□ -0.48
APOC1-209ENST00000592885 C2orf72A6NCS6 295 aa12.04□□□□□ -0.48
APOC1-209ENST00000592885 NPIPB8E9PQR5 432 aa12.04□□□□□ -0.48
APOC1-209ENST00000592885 LINC01387J3KSC0 135 aa12.04□□□□□ -0.48
APOC1-209ENST00000592885 UBFD1O14562 309 aaKnown RBP12.04□□□□□ -0.48
APOC1-209ENST00000592885 CRCPO75575 148 aa12.04□□□□□ -0.48
APOC1-209ENST00000592885 PROCP04070 461 aa12.04□□□□□ -0.48
APOC1-209ENST00000592885 CRHP06850 196 aa12.04□□□□□ -0.48
APOC1-209ENST00000592885 PRPH2P23942 346 aa12.04□□□□□ -0.48
APOC1-209ENST00000592885 DPP4P27487 766 aa12.04□□□□□ -0.48
APOC1-209ENST00000592885 EVI2BP34910 448 aa12.04□□□□□ -0.48
APOC1-209ENST00000592885 SLCO1A2P46721 670 aa12.04□□□□□ -0.48
APOC1-209ENST00000592885 CCT5P48643 541 aa12.04□□□□□ -0.48
APOC1-209ENST00000592885 DIO3P55073 304 aa12.04□□□□□ -0.48
APOC1-209ENST00000592885 FOXA1P55317 472 aa12.04□□□□□ -0.48
APOC1-209ENST00000592885 CLDN18P56856 261 aa12.04□□□□□ -0.48
APOC1-209ENST00000592885 PSG6Q00889 435 aa12.04□□□□□ -0.48
APOC1-209ENST00000592885 BTKQ06187 659 aa12.04□□□□□ -0.48
APOC1-209ENST00000592885 SNTB1Q13884 538 aaKnown RBP12.04□□□□□ -0.48
APOC1-209ENST00000592885 ZNHIT3Q15649 155 aaPredicted RBP12.04□□□□□ -0.48
APOC1-209ENST00000592885 PAMR1Q6UXH9 720 aa12.04□□□□□ -0.48
APOC1-209ENST00000592885 RNF165Q6ZSG1 346 aa12.04□□□□□ -0.48
APOC1-209ENST00000592885 TDRPQ86YL5 185 aa12.04□□□□□ -0.48
APOC1-209ENST00000592885 OR2L13Q8N349 312 aa12.04□□□□□ -0.48
APOC1-209ENST00000592885 FADS6Q8N9I5 356 aa12.04□□□□□ -0.48
APOC1-209ENST00000592885 OR4K17Q8NGC6 315 aa12.04□□□□□ -0.48
APOC1-209ENST00000592885 NRGNQ92686 78 aa12.04□□□□□ -0.48
APOC1-209ENST00000592885 EFHD2Q96C19 240 aaPredicted RBP12.04□□□□□ -0.48
APOC1-209ENST00000592885 RBM24Q9BX46 236 aaKnown RBP12.04□□□□□ -0.48
APOC1-209ENST00000592885 C3orf14Q9HBI5 128 aa12.04□□□□□ -0.48
APOC1-209ENST00000592885 HHATLQ9HCP6 504 aa12.04□□□□□ -0.48
APOC1-209ENST00000592885 Q9N2J8 555 aa12.04□□□□□ -0.48
APOC1-209ENST00000592885 SDHAF3Q9NRP4 125 aa12.04□□□□□ -0.48
APOC1-209ENST00000592885 CCM2LQ9NUG4 571 aaPredicted RBP12.04□□□□□ -0.48
APOC1-209ENST00000592885 DDX18Q9NVP1 670 aaKnown RBP12.04□□□□□ -0.48
APOC1-209ENST00000592885 PPP4R1LQ9P1A2 415 aa12.04□□□□□ -0.48
APOC1-209ENST00000592885 TBK1Q9UHD2 729 aa12.04□□□□□ -0.48
APOC1-209ENST00000592885 MID2Q9UJV3 735 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms