RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 KCNE2Q9Y6J6 123 aa6.98□□□□□ -1.29
VMP1-213ENST00000591877 MYO7BQ6PIF6 2116 aa6.97□□□□□ -1.29
VMP1-213ENST00000591877 IGKV3D-11A0A0A0MRZ8 115 aa6.97□□□□□ -1.29
VMP1-213ENST00000591877 TRAV17A0A0B4J275 112 aa6.97□□□□□ -1.29
VMP1-213ENST00000591877 OR5H15A6NDH6 313 aa6.97□□□□□ -1.29
VMP1-213ENST00000591877 PABPN1LA6NDY0 278 aaKnown RBP6.97□□□□□ -1.29
VMP1-213ENST00000591877 NCF1BA6NI72 391 aaPredicted RBP6.97□□□□□ -1.29
VMP1-213ENST00000591877 A8MUI8 341 aa6.97□□□□□ -1.29
VMP1-213ENST00000591877 NCF1CA8MVU1 366 aaPredicted RBP6.97□□□□□ -1.29
VMP1-213ENST00000591877 STX16-NPEPL1H3BU86 382 aa6.97□□□□□ -1.29
VMP1-213ENST00000591877 PSMD9O00233 223 aa6.97□□□□□ -1.29
VMP1-213ENST00000591877 STX16O14662 325 aa6.97□□□□□ -1.29
VMP1-213ENST00000591877 NDC80O14777 642 aa6.97□□□□□ -1.29
VMP1-213ENST00000591877 B4GALT2O60909 372 aa6.97□□□□□ -1.29
VMP1-213ENST00000591877 DDAH2O95865 285 aa6.97□□□□□ -1.29
VMP1-213ENST00000591877 FHP07954 510 aa6.97□□□□□ -1.29
VMP1-213ENST00000591877 SERPINA6P08185 405 aa6.97□□□□□ -1.29
VMP1-213ENST00000591877 NCF1P14598 390 aaPredicted RBP6.97□□□□□ -1.29
VMP1-213ENST00000591877 CD1DP15813 335 aa6.97□□□□□ -1.29
VMP1-213ENST00000591877 CD22P20273 847 aa6.97□□□□□ -1.29
VMP1-213ENST00000591877 GATA3P23771 443 aa6.97□□□□□ -1.29
VMP1-213ENST00000591877 CASQ1P31415 396 aa6.97□□□□□ -1.29
VMP1-213ENST00000591877 HNRNPH1P31943 449 aaKnown RBP6.97□□□□□ -1.29
VMP1-213ENST00000591877 GGT5P36269 586 aa6.97□□□□□ -1.29
VMP1-213ENST00000591877 HNMTP50135 292 aa6.97□□□□□ -1.29
VMP1-213ENST00000591877 PLTPP55058 493 aa6.97□□□□□ -1.29
VMP1-213ENST00000591877 SLC26A5P58743 744 aa6.97□□□□□ -1.29
VMP1-213ENST00000591877 CACNA1DQ01668 2161 aa6.97□□□□□ -1.29
VMP1-213ENST00000591877 GUCY2DQ02846 1103 aa6.97□□□□□ -1.29
VMP1-213ENST00000591877 ZNF33BQ06732 778 aa6.97□□□□□ -1.29
VMP1-213ENST00000591877 RGS1Q08116 209 aa6.97□□□□□ -1.29
VMP1-213ENST00000591877 CALCOCO2Q13137 446 aa6.97□□□□□ -1.29
VMP1-213ENST00000591877 TUBA3CQ13748 450 aa6.97□□□□□ -1.29
VMP1-213ENST00000591877 RUNX2Q13950 521 aa6.97□□□□□ -1.29
VMP1-213ENST00000591877 ABRAXAS2Q15018 415 aa6.97□□□□□ -1.29
VMP1-213ENST00000591877 EFTUD2Q15029 972 aaKnown RBP eCLIP6.97□□□□□ -1.294e-29■■□□□ 12.2
VMP1-213ENST00000591877 RBBP5Q15291 538 aaKnown RBP6.97□□□□□ -1.29
VMP1-213ENST00000591877 NSDHLQ15738 373 aa6.97□□□□□ -1.29
VMP1-213ENST00000591877 KBTBD12Q3ZCT8 623 aa6.97□□□□□ -1.29
VMP1-213ENST00000591877 RABL3Q5HYI8 236 aa6.97□□□□□ -1.29
VMP1-213ENST00000591877 TOR1AIP1Q5JTV8 583 aa6.97□□□□□ -1.29
VMP1-213ENST00000591877 ACER2Q5QJU3 275 aa6.97□□□□□ -1.29
VMP1-213ENST00000591877 UBAP2Q5T6F2 1119 aaKnown RBP6.97□□□□□ -1.29
VMP1-213ENST00000591877 ABHD17BQ5VST6 288 aa6.97□□□□□ -1.29
VMP1-213ENST00000591877 TUBA3EQ6PEY2 450 aa6.97□□□□□ -1.29
VMP1-213ENST00000591877 C3orf62Q6ZUJ4 267 aa6.97□□□□□ -1.29
VMP1-213ENST00000591877 FRA10AC1Q70Z53 315 aa6.97□□□□□ -1.29
VMP1-213ENST00000591877 ABHD13Q7L211 337 aa6.97□□□□□ -1.29
VMP1-213ENST00000591877 ADAMTSL2Q86TH1 951 aa6.97□□□□□ -1.29
VMP1-213ENST00000591877 ARMC8Q8IUR7 673 aa6.97□□□□□ -1.29
VMP1-213ENST00000591877 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.97□□□□□ -1.29
VMP1-213ENST00000591877 BEST3Q8N1M1 668 aa6.97□□□□□ -1.29
VMP1-213ENST00000591877 CA13Q8N1Q1 262 aa6.97□□□□□ -1.29
VMP1-213ENST00000591877 KIF2BQ8N4N8 673 aa6.97□□□□□ -1.29
VMP1-213ENST00000591877 METTL25Q8N6Q8 603 aa6.97□□□□□ -1.29
VMP1-213ENST00000591877 PTGR2Q8N8N7 351 aaPredicted RBP6.97□□□□□ -1.29
VMP1-213ENST00000591877 MDS2Q8NDY4 140 aa6.97□□□□□ -1.29
VMP1-213ENST00000591877 NFAM1Q8NET5 270 aaPredicted RBP6.97□□□□□ -1.29
VMP1-213ENST00000591877 TRPV3Q8NET8 790 aa6.97□□□□□ -1.29
VMP1-213ENST00000591877 ELP5Q8TE02 316 aa6.97□□□□□ -1.29
VMP1-213ENST00000591877 QRFPRQ96P65 431 aa6.97□□□□□ -1.29
VMP1-213ENST00000591877 SIGLEC12Q96PQ1 595 aa6.97□□□□□ -1.29
VMP1-213ENST00000591877 CPNE1Q99829 537 aa6.97□□□□□ -1.29
VMP1-213ENST00000591877 MECRQ9BV79 373 aa6.97□□□□□ -1.29
VMP1-213ENST00000591877 HES7Q9BYE0 225 aa6.97□□□□□ -1.29
VMP1-213ENST00000591877 ALOXE3Q9BYJ1 711 aa6.97□□□□□ -1.29
VMP1-213ENST00000591877 KCNK13Q9HB14 408 aa6.97□□□□□ -1.29
VMP1-213ENST00000591877 MMP25Q9NPA2 562 aa6.97□□□□□ -1.29
VMP1-213ENST00000591877 OLAHQ9NV23 265 aa6.97□□□□□ -1.29
VMP1-213ENST00000591877 COPG2Q9UBF2 871 aa6.97□□□□□ -1.29
VMP1-213ENST00000591877 C19orf25Q9UFG5 118 aaPredicted RBP6.97□□□□□ -1.29
VMP1-213ENST00000591877 PTBP2Q9UKA9 531 aaKnown RBP6.97□□□□□ -1.29
VMP1-213ENST00000591877 ZNF490Q9ULM2 529 aaPredicted RBP6.97□□□□□ -1.29
VMP1-213ENST00000591877 OSGIN2Q9Y236 505 aa6.97□□□□□ -1.29
VMP1-213ENST00000591877 CLDN16Q9Y5I7 305 aa6.97□□□□□ -1.29
VMP1-213ENST00000591877 EML6Q6ZMW3 1958 aa6.97□□□□□ -1.29
VMP1-213ENST00000591877 A0A0G2JN53 185 aa6.96□□□□□ -1.3
VMP1-213ENST00000591877 LRIT2A6NDA9 550 aa6.96□□□□□ -1.3
VMP1-213ENST00000591877 LRRTM2O43300 516 aa6.96□□□□□ -1.3
VMP1-213ENST00000591877 PRAMEF2O60811 474 aa6.96□□□□□ -1.3
VMP1-213ENST00000591877 GUCY1B2O75343 617 aa6.96□□□□□ -1.3
VMP1-213ENST00000591877 STSP08842 583 aa6.96□□□□□ -1.3
VMP1-213ENST00000591877 GSTA2P09210 222 aa6.96□□□□□ -1.3
VMP1-213ENST00000591877 SLC35E2BP0CK96 405 aa6.96□□□□□ -1.3
VMP1-213ENST00000591877 STMN1P16949 149 aa6.96□□□□□ -1.3
VMP1-213ENST00000591877 GNAZP19086 355 aa6.96□□□□□ -1.3
VMP1-213ENST00000591877 MAOAP21397 527 aa6.96□□□□□ -1.3
VMP1-213ENST00000591877 GP5P40197 560 aa6.96□□□□□ -1.3
VMP1-213ENST00000591877 MAGEA4P43358 317 aa6.96□□□□□ -1.3
VMP1-213ENST00000591877 HNRNPFP52597 415 aaKnown RBP6.96□□□□□ -1.3
VMP1-213ENST00000591877 SLC12A2P55011 1212 aa6.96□□□□□ -1.3
VMP1-213ENST00000591877 KCNK10P57789 538 aa6.96□□□□□ -1.3
VMP1-213ENST00000591877 OR4D2P58180 307 aa6.96□□□□□ -1.3
VMP1-213ENST00000591877 RAB10P61026 200 aa6.96□□□□□ -1.3
VMP1-213ENST00000591877 BTN3A2P78410 334 aa6.96□□□□□ -1.3
VMP1-213ENST00000591877 PMP22Q01453 160 aa6.96□□□□□ -1.3
VMP1-213ENST00000591877 INAQ16352 499 aa6.96□□□□□ -1.3
VMP1-213ENST00000591877 EXT1Q16394 746 aa6.96□□□□□ -1.3
VMP1-213ENST00000591877 BEAN1Q3B7T3 259 aa6.96□□□□□ -1.3
VMP1-213ENST00000591877 ADPRMQ3LIE5 342 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms