RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 RFX3P48380 749 aa20.94■□□□□ 0.94
ACTN4-210ENST00000588618 NR0B1P51843 470 aaKnown RBP20.94■□□□□ 0.94
ACTN4-210ENST00000588618 CRISP3P54108 245 aa20.94■□□□□ 0.94
ACTN4-210ENST00000588618 RRADP55042 308 aa20.94■□□□□ 0.94
ACTN4-210ENST00000588618 TRIM25Q14258 630 aaKnown RBP20.94■□□□□ 0.94
ACTN4-210ENST00000588618 SYPL1Q16563 259 aa20.94■□□□□ 0.94
ACTN4-210ENST00000588618 METTL25Q8N6Q8 603 aa20.94■□□□□ 0.94
ACTN4-210ENST00000588618 NFKBIDQ8NI38 313 aa20.94■□□□□ 0.94
ACTN4-210ENST00000588618 SLC38A5Q8WUX1 472 aa20.94■□□□□ 0.94
ACTN4-210ENST00000588618 FIG4Q92562 907 aa20.94■□□□□ 0.94
ACTN4-210ENST00000588618 ADIPOR1Q96A54 375 aa20.94■□□□□ 0.94
ACTN4-210ENST00000588618 ASB9Q96DX5 294 aa20.94■□□□□ 0.94
ACTN4-210ENST00000588618 NXF5Q9H1B4 397 aaKnown RBP20.94■□□□□ 0.94
ACTN4-210ENST00000588618 ATP13A2Q9NQ11 1180 aa20.94■□□□□ 0.94
ACTN4-210ENST00000588618 CALML5Q9NZT1 146 aa20.94■□□□□ 0.94
ACTN4-210ENST00000588618 CBLCQ9ULV8 474 aa20.94■□□□□ 0.94
ACTN4-210ENST00000588618 ACOX3O15254 700 aa20.93■□□□□ 0.94
ACTN4-210ENST00000588618 SERPINA7P05543 415 aa20.93■□□□□ 0.94
ACTN4-210ENST00000588618 TFPTP0C1Z6 253 aa20.93■□□□□ 0.94
ACTN4-210ENST00000588618 WT1P19544 449 aaPredicted RBP20.93■□□□□ 0.94
ACTN4-210ENST00000588618 TRHRP34981 398 aaPredicted RBP20.93■□□□□ 0.94
ACTN4-210ENST00000588618 PCGF2P35227 344 aa20.93■□□□□ 0.94
ACTN4-210ENST00000588618 KRT20P35900 424 aa20.93■□□□□ 0.94
ACTN4-210ENST00000588618 PSPHP78330 225 aa20.93■□□□□ 0.94
ACTN4-210ENST00000588618 CRTC2Q53ET0 693 aaPredicted RBP20.93■□□□□ 0.94
ACTN4-210ENST00000588618 DCST2Q5T1A1 773 aa20.93■□□□□ 0.94
ACTN4-210ENST00000588618 ATP1A1-AS1Q5TC04 95 aa20.93■□□□□ 0.94
ACTN4-210ENST00000588618 IRAK1BP1Q5VVH5 260 aa20.93■□□□□ 0.94
ACTN4-210ENST00000588618 REEP3Q6NUK4 255 aa20.93■□□□□ 0.94
ACTN4-210ENST00000588618 HIPK4Q8NE63 616 aa20.93■□□□□ 0.94
ACTN4-210ENST00000588618 TP53INP1Q96A56 240 aa20.93■□□□□ 0.94
ACTN4-210ENST00000588618 TMEM19Q96HH6 336 aa20.93■□□□□ 0.94
ACTN4-210ENST00000588618 MUC13Q9H3R2 512 aa20.93■□□□□ 0.94
ACTN4-210ENST00000588618 MAGEL2Q9UJ55 1249 aa20.93■□□□□ 0.94
ACTN4-210ENST00000588618 MED13Q9UHV7 2174 aa20.93■□□□□ 0.94
ACTN4-210ENST00000588618 GXYLT2A0PJZ3 443 aa20.92■□□□□ 0.94
ACTN4-210ENST00000588618 ARPC2O15144 300 aa20.92■□□□□ 0.94
ACTN4-210ENST00000588618 GCM2O75603 506 aaPredicted RBP20.92■□□□□ 0.94
ACTN4-210ENST00000588618 GGT1P19440 569 aa20.92■□□□□ 0.94
ACTN4-210ENST00000588618 ATP6V1B2P21281 511 aa20.92■□□□□ 0.94
ACTN4-210ENST00000588618 ATP6V1C1P21283 382 aa20.92■□□□□ 0.94
ACTN4-210ENST00000588618 PSMD4P55036 377 aaKnown RBP20.92■□□□□ 0.94
ACTN4-210ENST00000588618 AIMP2Q13155 320 aaKnown RBP20.92■□□□□ 0.94
ACTN4-210ENST00000588618 VEZF1Q14119 521 aa20.92■□□□□ 0.94
ACTN4-210ENST00000588618 DECR1Q16698 335 aa20.92■□□□□ 0.94
ACTN4-210ENST00000588618 ARHGAP11BQ3KRB8 267 aa20.92■□□□□ 0.94
ACTN4-210ENST00000588618 CYP27C1Q4G0S4 372 aa20.92■□□□□ 0.94
ACTN4-210ENST00000588618 TAGAPQ8N103 731 aa20.92■□□□□ 0.94
ACTN4-210ENST00000588618 SLC5A8Q8N695 610 aa20.92■□□□□ 0.94
ACTN4-210ENST00000588618 ANKFN1Q8N957 763 aa20.92■□□□□ 0.94
ACTN4-210ENST00000588618 TMEM102Q8N9M5 508 aaPredicted RBP20.92■□□□□ 0.94
ACTN4-210ENST00000588618 OR4N2Q8NGD1 307 aa20.92■□□□□ 0.94
ACTN4-210ENST00000588618 GATA6Q92908 595 aa20.92■□□□□ 0.94
ACTN4-210ENST00000588618 HSPBAP1Q96EW2 488 aa20.92■□□□□ 0.94
ACTN4-210ENST00000588618 DCBLD2Q96PD2 775 aa20.92■□□□□ 0.94
ACTN4-210ENST00000588618 TRNT1Q96Q11 434 aaKnown RBP20.92■□□□□ 0.94
ACTN4-210ENST00000588618 RUBCNLQ9H714 662 aa20.92■□□□□ 0.94
ACTN4-210ENST00000588618 POLHQ9Y253 713 aa20.92■□□□□ 0.94
ACTN4-210ENST00000588618 ZNF451Q9Y4E5 1061 aa20.92■□□□□ 0.94
ACTN4-210ENST00000588618 SNX13Q9Y5W8 968 aa20.92■□□□□ 0.94
ACTN4-210ENST00000588618 ACACAQ13085 2346 aa20.92■□□□□ 0.94
ACTN4-210ENST00000588618 ZIC2O95409 532 aaPredicted RBP20.92■□□□□ 0.94
ACTN4-210ENST00000588618 ERFP50548 548 aa20.92■□□□□ 0.94
ACTN4-210ENST00000588618 MRPS22P82650 360 aaKnown RBP20.92■□□□□ 0.94
ACTN4-210ENST00000588618 C1orf146Q5VVC0 180 aa20.92■□□□□ 0.94
ACTN4-210ENST00000588618 GLYATQ6IB77 296 aa20.92■□□□□ 0.94
ACTN4-210ENST00000588618 HEPHL1Q6MZM0 1159 aa20.92■□□□□ 0.94
ACTN4-210ENST00000588618 FIGNL1Q6PIW4 674 aa20.92■□□□□ 0.94
ACTN4-210ENST00000588618 GALNT10Q86SR1 603 aa20.92■□□□□ 0.94
ACTN4-210ENST00000588618 PROSER1Q86XN7 944 aa20.92■□□□□ 0.94
ACTN4-210ENST00000588618 LRGUKQ96M69 825 aa20.92■□□□□ 0.94
ACTN4-210ENST00000588618 G6PC3Q9BUM1 346 aa20.92■□□□□ 0.94
ACTN4-210ENST00000588618 DENND2DQ9H6A0 471 aaPredicted RBP20.92■□□□□ 0.94
ACTN4-210ENST00000588618 LIN28AQ9H9Z2 209 aaKnown RBP20.92■□□□□ 0.94
ACTN4-210ENST00000588618 CACYBPQ9HB71 228 aaKnown RBP20.92■□□□□ 0.94
ACTN4-210ENST00000588618 MYOTQ9UBF9 498 aa20.92■□□□□ 0.94
ACTN4-210ENST00000588618 WWP2O00308 870 aa20.91■□□□□ 0.94
ACTN4-210ENST00000588618 CXCR6O00574 342 aa20.91■□□□□ 0.94
ACTN4-210ENST00000588618 STX11O75558 287 aa20.91■□□□□ 0.94
ACTN4-210ENST00000588618 ITGAMP11215 1152 aa20.91■□□□□ 0.94
ACTN4-210ENST00000588618 ITGA3P26006 1051 aa20.91■□□□□ 0.94
ACTN4-210ENST00000588618 AQP1P29972 269 aa20.91■□□□□ 0.94
ACTN4-210ENST00000588618 PIGAP37287 484 aa20.91■□□□□ 0.94
ACTN4-210ENST00000588618 CRYBA2P53672 197 aa20.91■□□□□ 0.94
ACTN4-210ENST00000588618 CDC20Q12834 499 aa20.91■□□□□ 0.94
ACTN4-210ENST00000588618 RPS26P11Q5JNZ5 115 aaPredicted RBP20.91■□□□□ 0.94
ACTN4-210ENST00000588618 CCNJQ5T5M9 372 aa20.91■□□□□ 0.94
ACTN4-210ENST00000588618 CYP2R1Q6VVX0 501 aa20.91■□□□□ 0.94
ACTN4-210ENST00000588618 LRRC69Q6ZNQ3 347 aa20.91■□□□□ 0.94
ACTN4-210ENST00000588618 DHFR2Q86XF0 187 aa20.91■□□□□ 0.94
ACTN4-210ENST00000588618 CHDHQ8NE62 594 aaPredicted RBP20.91■□□□□ 0.94
ACTN4-210ENST00000588618 SLC22A8Q8TCC7 542 aa20.91■□□□□ 0.94
ACTN4-210ENST00000588618 FAM162AQ96A26 154 aa20.91■□□□□ 0.94
ACTN4-210ENST00000588618 THOC3Q96J01 351 aaKnown RBP20.91■□□□□ 0.94
ACTN4-210ENST00000588618 LMF1Q96S06 567 aa20.91■□□□□ 0.94
ACTN4-210ENST00000588618 TRIM15Q9C019 465 aa20.91■□□□□ 0.94
ACTN4-210ENST00000588618 FBXO34Q9NWN3 711 aa20.91■□□□□ 0.94
ACTN4-210ENST00000588618 EXPH5Q8NEV8 1989 aa20.9■□□□□ 0.94
ACTN4-210ENST00000588618 ARGFXA6NJG6 315 aa20.9■□□□□ 0.94
ACTN4-210ENST00000588618 TMEM200CA6NKL6 621 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms