RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 GPIP06744 558 aa10.47□□□□□ -0.73
VMP1-207ENST00000588131 CELA2AP08217 269 aa10.47□□□□□ -0.73
VMP1-207ENST00000588131 SDHBP21912 280 aa10.47□□□□□ -0.73
VMP1-207ENST00000588131 TRHRP34981 398 aaPredicted RBP10.47□□□□□ -0.73
VMP1-207ENST00000588131 CRISP3P54108 245 aa10.47□□□□□ -0.73
VMP1-207ENST00000588131 IL10RAQ13651 578 aa10.47□□□□□ -0.73
VMP1-207ENST00000588131 RTP5Q14D33 572 aa10.47□□□□□ -0.73
VMP1-207ENST00000588131 RCN1Q15293 331 aa10.47□□□□□ -0.73
VMP1-207ENST00000588131 CYBRD1Q53TN4 286 aa10.47□□□□□ -0.73
VMP1-207ENST00000588131 CRB2Q5IJ48 1285 aa10.47□□□□□ -0.73
VMP1-207ENST00000588131 TYW3Q6IPR3 259 aaKnown RBP10.47□□□□□ -0.73
VMP1-207ENST00000588131 AAGABQ6PD74 315 aa10.47□□□□□ -0.73
VMP1-207ENST00000588131 FRRS1Q6ZNA5 592 aa10.47□□□□□ -0.73
VMP1-207ENST00000588131 LRRC74BQ6ZQY2 392 aa10.47□□□□□ -0.73
VMP1-207ENST00000588131 EIF3MQ7L2H7 374 aaKnown RBP10.47□□□□□ -0.73
VMP1-207ENST00000588131 ZAR1Q86SH2 424 aa10.47□□□□□ -0.73
VMP1-207ENST00000588131 PATL1Q86TB9 770 aaKnown RBP10.47□□□□□ -0.73
VMP1-207ENST00000588131 GOLM1Q8NBJ4 401 aa10.47□□□□□ -0.73
VMP1-207ENST00000588131 OR11G2Q8NGC1 345 aa10.47□□□□□ -0.73
VMP1-207ENST00000588131 ADIPOR1Q96A54 375 aa10.47□□□□□ -0.73
VMP1-207ENST00000588131 RMND5BQ96G75 393 aaPredicted RBP10.47□□□□□ -0.73
VMP1-207ENST00000588131 VMP1Q96GC9 406 aa10.47□□□□□ -0.73
VMP1-207ENST00000588131 COL21A1Q96P44 957 aa10.47□□□□□ -0.73
VMP1-207ENST00000588131 LMF1Q96S06 567 aa10.47□□□□□ -0.73
VMP1-207ENST00000588131 SDF2Q99470 211 aa10.47□□□□□ -0.73
VMP1-207ENST00000588131 SEPHS2Q99611 448 aa10.47□□□□□ -0.73
VMP1-207ENST00000588131 BTBD2Q9BX70 525 aa10.47□□□□□ -0.73
VMP1-207ENST00000588131 WWTR1Q9GZV5 400 aa10.47□□□□□ -0.73
VMP1-207ENST00000588131 ZNF350Q9GZX5 532 aa10.47□□□□□ -0.73
VMP1-207ENST00000588131 QRSL1Q9H0R6 528 aaKnown RBP10.47□□□□□ -0.73
VMP1-207ENST00000588131 NXF5Q9H1B4 397 aaKnown RBP10.47□□□□□ -0.73
VMP1-207ENST00000588131 CCM2LQ9NUG4 571 aaPredicted RBP10.47□□□□□ -0.73
VMP1-207ENST00000588131 NKX1-2Q9UD57 310 aaPredicted RBP10.47□□□□□ -0.73
VMP1-207ENST00000588131 IL17BQ9UHF5 180 aa10.47□□□□□ -0.73
VMP1-207ENST00000588131 ANAPC2Q9UJX6 822 aa10.47□□□□□ -0.73
VMP1-207ENST00000588131 CFL2Q9Y281 166 aa10.47□□□□□ -0.73
VMP1-207ENST00000588131 GPC6Q9Y625 555 aaPredicted RBP10.47□□□□□ -0.73
VMP1-207ENST00000588131 DSPPQ9NZW4 1301 aa10.47□□□□□ -0.73
VMP1-207ENST00000588131 NPIPA5A0A0B4J1W7 369 aa10.46□□□□□ -0.73
VMP1-207ENST00000588131 A0A0G2JPF8 293 aa10.46□□□□□ -0.73
VMP1-207ENST00000588131 TRBV11-1A0A0K0K1C0 115 aa10.46□□□□□ -0.73
VMP1-207ENST00000588131 CENPVL1A0A0U1RR11 272 aa10.46□□□□□ -0.73
VMP1-207ENST00000588131 C2orf92A0A1B0GVN3 265 aa10.46□□□□□ -0.73
VMP1-207ENST00000588131 A0A1W2PQ72 361 aa10.46□□□□□ -0.73
VMP1-207ENST00000588131 TRABD2BA6NFA1 517 aa10.46□□□□□ -0.73
VMP1-207ENST00000588131 FRG2CA6NGY1 282 aa10.46□□□□□ -0.73
VMP1-207ENST00000588131 TTC36A6NLP5 189 aa10.46□□□□□ -0.73
VMP1-207ENST00000588131 HNRNPCL2B2RXH8 293 aa10.46□□□□□ -0.73
VMP1-207ENST00000588131 HNRNPCL3B7ZW38 293 aa10.46□□□□□ -0.73
VMP1-207ENST00000588131 NPIPA7E9PJI5 369 aa10.46□□□□□ -0.73
VMP1-207ENST00000588131 PCDH17O14917 1159 aa10.46□□□□□ -0.73
VMP1-207ENST00000588131 KCNK2O95069 426 aa10.46□□□□□ -0.73
VMP1-207ENST00000588131 MFN2O95140 757 aa10.46□□□□□ -0.73
VMP1-207ENST00000588131 NPIPA8P0DM63 369 aa10.46□□□□□ -0.73
VMP1-207ENST00000588131 HNRNPCL4P0DMR1 293 aa10.46□□□□□ -0.73
VMP1-207ENST00000588131 UMPSP11172 480 aa10.46□□□□□ -0.73
VMP1-207ENST00000588131 SPINK2P20155 84 aa10.46□□□□□ -0.73
VMP1-207ENST00000588131 CD247P20963 164 aa10.46□□□□□ -0.73
VMP1-207ENST00000588131 SLC7A1P30825 629 aa10.46□□□□□ -0.73
VMP1-207ENST00000588131 PPICP45877 212 aa10.46□□□□□ -0.73
VMP1-207ENST00000588131 RFX3P48380 749 aa10.46□□□□□ -0.73
VMP1-207ENST00000588131 RNF4P78317 190 aa10.46□□□□□ -0.73
VMP1-207ENST00000588131 GNA13Q14344 377 aa10.46□□□□□ -0.73
VMP1-207ENST00000588131 SSPNQ14714 243 aa10.46□□□□□ -0.73
VMP1-207ENST00000588131 PRAMEF8Q5VWM4 474 aa10.46□□□□□ -0.73
VMP1-207ENST00000588131 PRAMEF7Q5VXH5 474 aa10.46□□□□□ -0.73
VMP1-207ENST00000588131 SLC29A4Q7RTT9 530 aa10.46□□□□□ -0.73
VMP1-207ENST00000588131 VTCN1Q7Z7D3 282 aa10.46□□□□□ -0.73
VMP1-207ENST00000588131 EID3Q8N140 333 aa10.46□□□□□ -0.73
VMP1-207ENST00000588131 IL22RA1Q8N6P7 574 aa10.46□□□□□ -0.73
VMP1-207ENST00000588131 BCORP1Q8N888 145 aa10.46□□□□□ -0.73
VMP1-207ENST00000588131 ZNF441Q8N8Z8 693 aa10.46□□□□□ -0.73
VMP1-207ENST00000588131 SMYD1Q8NB12 490 aa10.46□□□□□ -0.73
VMP1-207ENST00000588131 ZG16BQ96DA0 208 aa10.46□□□□□ -0.73
VMP1-207ENST00000588131 SLC47A1Q96FL8 570 aa10.46□□□□□ -0.73
VMP1-207ENST00000588131 PYURFQ96I23 114 aa10.46□□□□□ -0.73
VMP1-207ENST00000588131 TPD52L3Q96J77 140 aa10.46□□□□□ -0.73
VMP1-207ENST00000588131 LCORQ96JN0 433 aaPredicted RBP10.46□□□□□ -0.73
VMP1-207ENST00000588131 HSH2DQ96JZ2 352 aa10.46□□□□□ -0.73
VMP1-207ENST00000588131 IMMP1LQ96LU5 166 aa10.46□□□□□ -0.73
VMP1-207ENST00000588131 GPR87Q9BY21 358 aa10.46□□□□□ -0.73
VMP1-207ENST00000588131 LIN28AQ9H9Z2 209 aaKnown RBP10.46□□□□□ -0.73
VMP1-207ENST00000588131 Q9N2J8 555 aa10.46□□□□□ -0.73
VMP1-207ENST00000588131 CALML5Q9NZT1 146 aa10.46□□□□□ -0.73
VMP1-207ENST00000588131 RPS6KA6Q9UK32 745 aa10.46□□□□□ -0.73
VMP1-207ENST00000588131 MKLN1Q9UL63 735 aa10.46□□□□□ -0.73
VMP1-207ENST00000588131 SAMD4AQ9UPU9 718 aaKnown RBP10.46□□□□□ -0.73
VMP1-207ENST00000588131 AURKCQ9UQB9 309 aa10.46□□□□□ -0.73
VMP1-207ENST00000588131 WDR45Q9Y484 360 aa10.46□□□□□ -0.73
VMP1-207ENST00000588131 ZNF451Q9Y4E5 1061 aa10.46□□□□□ -0.73
VMP1-207ENST00000588131 PCDHGB3Q9Y5G1 929 aa10.46□□□□□ -0.73
VMP1-207ENST00000588131 PCDHGA6Q9Y5G7 932 aa10.46□□□□□ -0.73
VMP1-207ENST00000588131 AK5Q9Y6K8 562 aa10.46□□□□□ -0.73
VMP1-207ENST00000588131 WDFY3Q8IZQ1 3526 aa10.46□□□□□ -0.74
VMP1-207ENST00000588131 CDC14CA4D256 554 aa10.45□□□□□ -0.74
VMP1-207ENST00000588131 TMEM200CA6NKL6 621 aa10.45□□□□□ -0.74
VMP1-207ENST00000588131 SUV39H1O43463 412 aa10.45□□□□□ -0.74
VMP1-207ENST00000588131 TPST1O60507 370 aa10.45□□□□□ -0.74
VMP1-207ENST00000588131 STX11O75558 287 aa10.45□□□□□ -0.74
VMP1-207ENST00000588131 PDE9AO76083 593 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms