RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 OPN1SWP03999 348 aa9.69□□□□□ -0.86
LIG3-203ENST00000585370 PRB1P04280 392 aa9.69□□□□□ -0.86
LIG3-203ENST00000585370 ALPPP05187 535 aa9.69□□□□□ -0.86
LIG3-203ENST00000585370 RRM2P31350 389 aa9.69□□□□□ -0.86
LIG3-203ENST00000585370 IFNA8P32881 189 aa9.69□□□□□ -0.86
LIG3-203ENST00000585370 GCGRP47871 477 aa9.69□□□□□ -0.86
LIG3-203ENST00000585370 DAB2P98082 770 aa9.69□□□□□ -0.86
LIG3-203ENST00000585370 MGAT2Q10469 447 aa9.69□□□□□ -0.86
LIG3-203ENST00000585370 ZNHIT3Q15649 155 aaPredicted RBP9.69□□□□□ -0.86
LIG3-203ENST00000585370 LTB4RQ15722 352 aa9.69□□□□□ -0.86
LIG3-203ENST00000585370 DUSP7Q16829 419 aa9.69□□□□□ -0.86
LIG3-203ENST00000585370 ZSWIM7Q19AV6 140 aa9.69□□□□□ -0.86
LIG3-203ENST00000585370 TBC1D25Q3MII6 688 aa9.69□□□□□ -0.86
LIG3-203ENST00000585370 KDM4DQ6B0I6 523 aa9.69□□□□□ -0.86
LIG3-203ENST00000585370 DHRS4L2Q6PKH6 230 aa9.69□□□□□ -0.86
LIG3-203ENST00000585370 GALNT12Q8IXK2 581 aa9.69□□□□□ -0.86
LIG3-203ENST00000585370 PEX5LQ8IYB4 626 aa9.69□□□□□ -0.86
LIG3-203ENST00000585370 VWA5B2Q8N398 1253 aa9.69□□□□□ -0.86
LIG3-203ENST00000585370 SMYD1Q8NB12 490 aa9.69□□□□□ -0.86
LIG3-203ENST00000585370 TMEM52Q8NDY8 209 aa9.69□□□□□ -0.86
LIG3-203ENST00000585370 SETD9Q8NE22 299 aa9.69□□□□□ -0.86
LIG3-203ENST00000585370 PIK3C3Q8NEB9 887 aa9.69□□□□□ -0.86
LIG3-203ENST00000585370 OR5D16Q8NGK9 328 aa9.69□□□□□ -0.86
LIG3-203ENST00000585370 APOBEC4Q8WW27 367 aaKnown RBP9.69□□□□□ -0.86
LIG3-203ENST00000585370 HOXB13Q92826 284 aaPredicted RBP9.69□□□□□ -0.86
LIG3-203ENST00000585370 RIT1Q92963 219 aa9.69□□□□□ -0.86
LIG3-203ENST00000585370 PEX11GQ96HA9 241 aa9.69□□□□□ -0.86
LIG3-203ENST00000585370 DGAT2Q96PD7 388 aa9.69□□□□□ -0.86
LIG3-203ENST00000585370 UBL7Q96S82 380 aaPredicted RBP9.69□□□□□ -0.86
LIG3-203ENST00000585370 YIPF4Q9BSR8 244 aa9.69□□□□□ -0.86
LIG3-203ENST00000585370 ALOXE3Q9BYJ1 711 aa9.69□□□□□ -0.86
LIG3-203ENST00000585370 AMBRA1Q9C0C7 1298 aa9.69□□□□□ -0.86
LIG3-203ENST00000585370 LRRN3Q9H3W5 708 aa9.69□□□□□ -0.86
LIG3-203ENST00000585370 TOR3AQ9H497 397 aa9.69□□□□□ -0.86
LIG3-203ENST00000585370 ARMC7Q9H6L4 198 aa9.69□□□□□ -0.86
LIG3-203ENST00000585370 CXorf21Q9HAI6 301 aa9.69□□□□□ -0.86
LIG3-203ENST00000585370 FAM118AQ9NWS6 357 aa9.69□□□□□ -0.86
LIG3-203ENST00000585370 KLHL28Q9NXS3 571 aa9.69□□□□□ -0.86
LIG3-203ENST00000585370 MAT2BQ9NZL9 334 aa9.69□□□□□ -0.86
LIG3-203ENST00000585370 PDP1Q9P0J1 537 aaPredicted RBP9.69□□□□□ -0.86
LIG3-203ENST00000585370 HCN3Q9P1Z3 774 aa9.69□□□□□ -0.86
LIG3-203ENST00000585370 KLHL3Q9UH77 587 aa9.69□□□□□ -0.86
LIG3-203ENST00000585370 MYRFQ9Y2G1 1151 aa9.69□□□□□ -0.86
LIG3-203ENST00000585370 SH3GLB1Q9Y371 365 aa9.69□□□□□ -0.86
LIG3-203ENST00000585370 HSPE1-MOB4S4R3N1 261 aa9.69□□□□□ -0.86
LIG3-203ENST00000585370 SCN3AQ9NY46 2000 aa9.68□□□□□ -0.86
LIG3-203ENST00000585370 DSPPQ9NZW4 1301 aa9.68□□□□□ -0.86
LIG3-203ENST00000585370 A0A1W2PS29 197 aa9.68□□□□□ -0.86
LIG3-203ENST00000585370 EIF4E1BA6NMX2 242 aaKnown RBP9.68□□□□□ -0.86
LIG3-203ENST00000585370 STX11O75558 287 aa9.68□□□□□ -0.86
LIG3-203ENST00000585370 GADD45GO95257 159 aa9.68□□□□□ -0.86
LIG3-203ENST00000585370 H6PDO95479 791 aa9.68□□□□□ -0.86
LIG3-203ENST00000585370 OXSR1O95747 527 aaPredicted RBP9.68□□□□□ -0.86
LIG3-203ENST00000585370 CTSBP07858 339 aa9.68□□□□□ -0.86
LIG3-203ENST00000585370 THBS1P07996 1170 aa9.68□□□□□ -0.86
LIG3-203ENST00000585370 CHRM4P08173 479 aa9.68□□□□□ -0.86
LIG3-203ENST00000585370 HBQ1P09105 142 aa9.68□□□□□ -0.86
LIG3-203ENST00000585370 PABPC4LP0CB38 370 aaKnown RBP9.68□□□□□ -0.86
LIG3-203ENST00000585370 ITGAMP11215 1152 aa9.68□□□□□ -0.86
LIG3-203ENST00000585370 IGFBP5P24593 272 aa9.68□□□□□ -0.86
LIG3-203ENST00000585370 PRKAR1BP31321 381 aa9.68□□□□□ -0.86
LIG3-203ENST00000585370 CSF2RBP32927 897 aa9.68□□□□□ -0.86
LIG3-203ENST00000585370 MAP3K8P41279 467 aa9.68□□□□□ -0.86
LIG3-203ENST00000585370 STT3AP46977 705 aa9.68□□□□□ -0.86
LIG3-203ENST00000585370 SEPHS1P49903 392 aa9.68□□□□□ -0.86
LIG3-203ENST00000585370 IST1P53990 364 aa9.68□□□□□ -0.86
LIG3-203ENST00000585370 SPIBQ01892 262 aa9.68□□□□□ -0.86
LIG3-203ENST00000585370 TLE3Q04726 772 aa9.68□□□□□ -0.86
LIG3-203ENST00000585370 TOP3AQ13472 1001 aaPredicted RBP9.68□□□□□ -0.86
LIG3-203ENST00000585370 DSG2Q14126 1118 aa9.68□□□□□ -0.86
LIG3-203ENST00000585370 LARS2Q15031 903 aaKnown RBP9.68□□□□□ -0.86
LIG3-203ENST00000585370 MICAQ29983 383 aa9.68□□□□□ -0.86
LIG3-203ENST00000585370 KCTD21Q4G0X4 260 aa9.68□□□□□ -0.86
LIG3-203ENST00000585370 TRMT12Q53H54 448 aaKnown RBP9.68□□□□□ -0.86
LIG3-203ENST00000585370 ZNF311Q5JNZ3 666 aa9.68□□□□□ -0.86
LIG3-203ENST00000585370 RPS26P11Q5JNZ5 115 aaPredicted RBP9.68□□□□□ -0.86
LIG3-203ENST00000585370 COLEC12Q5KU26 742 aa9.68□□□□□ -0.86
LIG3-203ENST00000585370 SNAP47Q5SQN1 464 aa9.68□□□□□ -0.86
LIG3-203ENST00000585370 FAHD1Q6P587 224 aa9.68□□□□□ -0.86
LIG3-203ENST00000585370 TTC33Q6PID6 262 aaPredicted RBP9.68□□□□□ -0.86
LIG3-203ENST00000585370 FAM111BQ6SJ93 734 aa9.68□□□□□ -0.86
LIG3-203ENST00000585370 ARHGAP22Q7Z5H3 698 aa9.68□□□□□ -0.86
LIG3-203ENST00000585370 TSEN54Q7Z6J9 526 aaKnown RBP9.68□□□□□ -0.86
LIG3-203ENST00000585370 THAP5Q7Z6K1 395 aa9.68□□□□□ -0.86
LIG3-203ENST00000585370 TMEM179BQ7Z7N9 219 aa9.68□□□□□ -0.86
LIG3-203ENST00000585370 ZNF605Q86T29 641 aa9.68□□□□□ -0.86
LIG3-203ENST00000585370 C8orf59Q8N0T1 100 aaPredicted RBP9.68□□□□□ -0.86
LIG3-203ENST00000585370 SLC16A11Q8NCK7 471 aa9.68□□□□□ -0.86
LIG3-203ENST00000585370 OR7G1Q8NGA0 311 aa9.68□□□□□ -0.86
LIG3-203ENST00000585370 GPR32P1Q8NGA4 272 aa9.68□□□□□ -0.86
LIG3-203ENST00000585370 OR1L3Q8NH93 324 aa9.68□□□□□ -0.86
LIG3-203ENST00000585370 SLC9A6Q92581 669 aa9.68□□□□□ -0.86
LIG3-203ENST00000585370 SAP130Q9H0E3 1048 aa9.68□□□□□ -0.86
LIG3-203ENST00000585370 SLC38A1Q9H2H9 487 aa9.68□□□□□ -0.86
LIG3-203ENST00000585370 ZNF556Q9HAH1 456 aa9.68□□□□□ -0.86
LIG3-203ENST00000585370 SMURF2Q9HAU4 748 aa9.68□□□□□ -0.86
LIG3-203ENST00000585370 EQTNQ9NQ60 294 aa9.68□□□□□ -0.86
LIG3-203ENST00000585370 FGF21Q9NSA1 209 aa9.68□□□□□ -0.86
LIG3-203ENST00000585370 ACER3Q9NUN7 267 aa9.68□□□□□ -0.86
LIG3-203ENST00000585370 TUBA8Q9NY65 449 aaPredicted RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms