RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 MLLT1Q03111 559 aaPredicted RBP13.32□□□□□ -0.28
CDK5RAP3-237ENST00000585163 ST3GAL3Q11203 375 aa13.32□□□□□ -0.28
CDK5RAP3-237ENST00000585163 WSCD2Q2TBF2 565 aa13.32□□□□□ -0.28
CDK5RAP3-237ENST00000585163 CLEC12AQ5QGZ9 265 aa13.32□□□□□ -0.28
CDK5RAP3-237ENST00000585163 LCN1P1Q5VSP4 162 aa13.32□□□□□ -0.28
CDK5RAP3-237ENST00000585163 TMEM107Q6UX40 140 aa13.32□□□□□ -0.28
CDK5RAP3-237ENST00000585163 ACOT4Q8N9L9 421 aa13.32□□□□□ -0.28
CDK5RAP3-237ENST00000585163 ENKURQ8TC29 256 aa13.32□□□□□ -0.28
CDK5RAP3-237ENST00000585163 RFKQ969G6 155 aa13.32□□□□□ -0.28
CDK5RAP3-237ENST00000585163 ZG16BQ96DA0 208 aa13.32□□□□□ -0.28
CDK5RAP3-237ENST00000585163 ZFYVE19Q96K21 471 aa13.32□□□□□ -0.28
CDK5RAP3-237ENST00000585163 FYTTD1Q96QD9 318 aaKnown RBP13.32□□□□□ -0.28
CDK5RAP3-237ENST00000585163 INSM2Q96T92 566 aaPredicted RBP13.32□□□□□ -0.28
CDK5RAP3-237ENST00000585163 COQ7Q99807 217 aa13.32□□□□□ -0.28
CDK5RAP3-237ENST00000585163 MACROD1Q9BQ69 325 aa13.32□□□□□ -0.28
CDK5RAP3-237ENST00000585163 TMEM246Q9BRR3 403 aa13.32□□□□□ -0.28
CDK5RAP3-237ENST00000585163 ANKRD19PQ9H560 264 aa13.32□□□□□ -0.28
CDK5RAP3-237ENST00000585163 PAQR5Q9NXK6 330 aaPredicted RBP13.32□□□□□ -0.28
CDK5RAP3-237ENST00000585163 COMMD3Q9UBI1 195 aa13.32□□□□□ -0.28
CDK5RAP3-237ENST00000585163 GPR55Q9Y2T6 319 aaPredicted RBP13.32□□□□□ -0.28
CDK5RAP3-237ENST00000585163 BOLA1Q9Y3E2 137 aa13.32□□□□□ -0.28
CDK5RAP3-237ENST00000585163 CPSF4LA6NMK7 179 aaKnown RBP13.31□□□□□ -0.28
CDK5RAP3-237ENST00000585163 C1QTNF3-AMACRE9PGA6 284 aa13.31□□□□□ -0.28
CDK5RAP3-237ENST00000585163 FRS3O43559 492 aa13.31□□□□□ -0.28
CDK5RAP3-237ENST00000585163 STATHP02808 62 aa13.31□□□□□ -0.28
CDK5RAP3-237ENST00000585163 APEX1P27695 318 aaKnown RBP13.31□□□□□ -0.28
CDK5RAP3-237ENST00000585163 SOX18P35713 384 aa13.31□□□□□ -0.28
CDK5RAP3-237ENST00000585163 PRR5P85299 388 aa13.31□□□□□ -0.28
CDK5RAP3-237ENST00000585163 CHRNEQ04844 493 aa13.31□□□□□ -0.28
CDK5RAP3-237ENST00000585163 PIP5KL1Q5T9C9 394 aa13.31□□□□□ -0.28
CDK5RAP3-237ENST00000585163 AADACL4Q5VUY2 407 aa13.31□□□□□ -0.28
CDK5RAP3-237ENST00000585163 ABHD17CQ6PCB6 329 aa13.31□□□□□ -0.28
CDK5RAP3-237ENST00000585163 CNIH2Q6PI25 160 aa13.31□□□□□ -0.28
CDK5RAP3-237ENST00000585163 NOXA1Q86UR1 476 aa13.31□□□□□ -0.28
CDK5RAP3-237ENST00000585163 UBE2J2Q8N2K1 259 aa13.31□□□□□ -0.28
CDK5RAP3-237ENST00000585163 POF1BQ8WVV4 589 aa13.31□□□□□ -0.28
CDK5RAP3-237ENST00000585163 TRIM43Q96BQ3 446 aaPredicted RBP13.31□□□□□ -0.28
CDK5RAP3-237ENST00000585163 C12orf66Q96MD2 445 aa13.31□□□□□ -0.28
CDK5RAP3-237ENST00000585163 OR7D2Q96RA2 312 aa13.31□□□□□ -0.28
CDK5RAP3-237ENST00000585163 XKR8Q9H6D3 395 aa13.31□□□□□ -0.28
CDK5RAP3-237ENST00000585163 CLCA2Q9UQC9 943 aa13.31□□□□□ -0.28
CDK5RAP3-237ENST00000585163 CHST2Q9Y4C5 530 aa13.31□□□□□ -0.28
CDK5RAP3-237ENST00000585163 MYO7AQ13402 2215 aa13.31□□□□□ -0.28
CDK5RAP3-237ENST00000585163 ANKRD34BA5PLL1 514 aa13.31□□□□□ -0.28
CDK5RAP3-237ENST00000585163 SURF4O15260 269 aa13.31□□□□□ -0.28
CDK5RAP3-237ENST00000585163 GUCY1B2O75343 617 aa13.31□□□□□ -0.28
CDK5RAP3-237ENST00000585163 NTN1O95631 604 aa13.31□□□□□ -0.28
CDK5RAP3-237ENST00000585163 AIFM1O95831 613 aa13.31□□□□□ -0.28
CDK5RAP3-237ENST00000585163 YES1P07947 543 aa13.31□□□□□ -0.28
CDK5RAP3-237ENST00000585163 SLC2A2P11168 524 aaPredicted RBP13.31□□□□□ -0.28
CDK5RAP3-237ENST00000585163 CPN2P22792 545 aa13.31□□□□□ -0.28
CDK5RAP3-237ENST00000585163 HLA-DMAP28067 261 aa13.31□□□□□ -0.28
CDK5RAP3-237ENST00000585163 TGM3Q08188 693 aa13.31□□□□□ -0.28
CDK5RAP3-237ENST00000585163 ACSM1Q08AH1 577 aa13.31□□□□□ -0.28
CDK5RAP3-237ENST00000585163 DMPKQ09013 629 aa13.31□□□□□ -0.28
CDK5RAP3-237ENST00000585163 ZNF155Q12901 538 aaPredicted RBP13.31□□□□□ -0.28
CDK5RAP3-237ENST00000585163 DSG2Q14126 1118 aa13.31□□□□□ -0.28
CDK5RAP3-237ENST00000585163 QPRTQ15274 297 aa13.31□□□□□ -0.28
CDK5RAP3-237ENST00000585163 SLC30A6Q6NXT4 461 aa13.31□□□□□ -0.28
CDK5RAP3-237ENST00000585163 METAP1DQ6UB28 335 aaPredicted RBP13.31□□□□□ -0.28
CDK5RAP3-237ENST00000585163 RRM2BQ7LG56 351 aa13.31□□□□□ -0.28
CDK5RAP3-237ENST00000585163 C11orf74Q86VG3 221 aa13.31□□□□□ -0.28
CDK5RAP3-237ENST00000585163 VRK2Q86Y07 508 aa13.31□□□□□ -0.28
CDK5RAP3-237ENST00000585163 Q8N402 240 aa13.31□□□□□ -0.28
CDK5RAP3-237ENST00000585163 OR4F15Q8NGB8 312 aa13.31□□□□□ -0.28
CDK5RAP3-237ENST00000585163 PIGXQ8TBF5 258 aa13.31□□□□□ -0.28
CDK5RAP3-237ENST00000585163 KLK6Q92876 244 aa13.31□□□□□ -0.28
CDK5RAP3-237ENST00000585163 ZC3HAV1LQ96H79 300 aaKnown RBP13.31□□□□□ -0.28
CDK5RAP3-237ENST00000585163 DCLRE1CQ96SD1 692 aaKnown RBP13.31□□□□□ -0.28
CDK5RAP3-237ENST00000585163 ZNF649Q9BS31 505 aa13.31□□□□□ -0.28
CDK5RAP3-237ENST00000585163 IL20Q9NYY1 176 aa13.31□□□□□ -0.28
CDK5RAP3-237ENST00000585163 SLC13A4Q9UKG4 626 aa13.31□□□□□ -0.28
CDK5RAP3-237ENST00000585163 CES1P1Q9UKY3 287 aa13.31□□□□□ -0.28
CDK5RAP3-237ENST00000585163 ENTPD4Q9Y227 616 aa13.31□□□□□ -0.28
CDK5RAP3-237ENST00000585163 A0A1W2PS29 197 aa13.3□□□□□ -0.28
CDK5RAP3-237ENST00000585163 EMC8O43402 210 aa13.3□□□□□ -0.28
CDK5RAP3-237ENST00000585163 HLA-DPB1P04440 258 aa13.3□□□□□ -0.28
CDK5RAP3-237ENST00000585163 C8orf89P0DMQ9 161 aa13.3□□□□□ -0.28
CDK5RAP3-237ENST00000585163 GNSP15586 552 aa13.3□□□□□ -0.28
CDK5RAP3-237ENST00000585163 ENPP1P22413 925 aa13.3□□□□□ -0.28
CDK5RAP3-237ENST00000585163 ATP5A1P25705 553 aaKnown RBP13.3□□□□□ -0.28
CDK5RAP3-237ENST00000585163 TRHRP34981 398 aaPredicted RBP13.3□□□□□ -0.28
CDK5RAP3-237ENST00000585163 TRIM23P36406 574 aa13.3□□□□□ -0.28
CDK5RAP3-237ENST00000585163 MADCAM1Q13477 382 aa13.3□□□□□ -0.28
CDK5RAP3-237ENST00000585163 TMEM44Q2T9K0 475 aa13.3□□□□□ -0.28
CDK5RAP3-237ENST00000585163 C18orf63Q68DL7 685 aa13.3□□□□□ -0.28
CDK5RAP3-237ENST00000585163 SLC48A1Q6P1K1 146 aa13.3□□□□□ -0.28
CDK5RAP3-237ENST00000585163 FAM20CQ8IXL6 584 aa13.3□□□□□ -0.28
CDK5RAP3-237ENST00000585163 OR4Q3Q8NH05 313 aa13.3□□□□□ -0.28
CDK5RAP3-237ENST00000585163 OSTF1Q92882 214 aa13.3□□□□□ -0.28
CDK5RAP3-237ENST00000585163 ATF6BQ99941 703 aa13.3□□□□□ -0.28
CDK5RAP3-237ENST00000585163 TEX101Q9BY14 249 aa13.3□□□□□ -0.28
CDK5RAP3-237ENST00000585163 POLMQ9NP87 494 aaPredicted RBP13.3□□□□□ -0.28
CDK5RAP3-237ENST00000585163 PLSCR3Q9NRY6 295 aa13.3□□□□□ -0.28
CDK5RAP3-237ENST00000585163 INSL6Q9Y581 213 aa13.3□□□□□ -0.28
CDK5RAP3-237ENST00000585163 PCDHGB7Q9Y5F8 929 aa13.3□□□□□ -0.28
CDK5RAP3-237ENST00000585163 TRPM6Q9BX84 2022 aa13.3□□□□□ -0.28
CDK5RAP3-237ENST00000585163 GPR89AB7ZAQ6 455 aa13.3□□□□□ -0.28
CDK5RAP3-237ENST00000585163 AKAP8O43823 692 aaKnown RBP13.3□□□□□ -0.28
CDK5RAP3-237ENST00000585163 HPGDSO60760 199 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms