RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 LMF2Q9BU23 707 aaKnown RBP9.04□□□□□ -0.96
SKA2-208ENST00000583927 OSBPL11Q9BXB4 747 aa9.04□□□□□ -0.96
SKA2-208ENST00000583927 PRDM14Q9GZV8 571 aa9.04□□□□□ -0.96
SKA2-208ENST00000583927 METTL7AQ9H8H3 244 aa9.04□□□□□ -0.96
SKA2-208ENST00000583927 ANKRA2Q9H9E1 313 aa9.04□□□□□ -0.96
SKA2-208ENST00000583927 ASIC5Q9NY37 505 aa9.04□□□□□ -0.96
SKA2-208ENST00000583927 SPRR3Q9UBC9 169 aa9.04□□□□□ -0.96
SKA2-208ENST00000583927 ATP6V1HQ9UI12 483 aa9.04□□□□□ -0.96
SKA2-208ENST00000583927 ACAD8Q9UKU7 415 aa9.04□□□□□ -0.96
SKA2-208ENST00000583927 ABCG2Q9UNQ0 655 aa9.04□□□□□ -0.96
SKA2-208ENST00000583927 MAPRE3Q9UPY8 281 aa9.04□□□□□ -0.96
SKA2-208ENST00000583927 FAM215AQ9Y5M1 114 aa9.04□□□□□ -0.96
SKA2-208ENST00000583927 MYO9AB2RTY4 2548 aa9.04□□□□□ -0.96
SKA2-208ENST00000583927 PRAMEF25A6NGN4 478 aa9.03□□□□□ -0.96
SKA2-208ENST00000583927 TMEM233B4DJY2 109 aa9.03□□□□□ -0.96
SKA2-208ENST00000583927 REM1O75628 298 aa9.03□□□□□ -0.96
SKA2-208ENST00000583927 SOX30O94993 753 aa9.03□□□□□ -0.96
SKA2-208ENST00000583927 LRATO95237 230 aa9.03□□□□□ -0.96
SKA2-208ENST00000583927 SERPINE1P05121 402 aa9.03□□□□□ -0.96
SKA2-208ENST00000583927 IGFBP2P18065 325 aa9.03□□□□□ -0.96
SKA2-208ENST00000583927 GRNP28799 593 aaKnown RBP9.03□□□□□ -0.96
SKA2-208ENST00000583927 IL12BP29460 328 aa9.03□□□□□ -0.96
SKA2-208ENST00000583927 KRT20P35900 424 aa9.03□□□□□ -0.96
SKA2-208ENST00000583927 GAS1P54826 345 aa9.03□□□□□ -0.96
SKA2-208ENST00000583927 PSMD4P55036 377 aaKnown RBP9.03□□□□□ -0.96
SKA2-208ENST00000583927 CORO7P57737 925 aa9.03□□□□□ -0.96
SKA2-208ENST00000583927 RPL38P63173 70 aaKnown RBP9.03□□□□□ -0.96
SKA2-208ENST00000583927 TFF3Q07654 80 aa9.03□□□□□ -0.96
SKA2-208ENST00000583927 PMPCAQ10713 525 aa9.03□□□□□ -0.96
SKA2-208ENST00000583927 MAD2L1Q13257 205 aaPredicted RBP9.03□□□□□ -0.96
SKA2-208ENST00000583927 CDSNQ15517 529 aa9.03□□□□□ -0.96
SKA2-208ENST00000583927 ZNHIT3Q15649 155 aaPredicted RBP9.03□□□□□ -0.96
SKA2-208ENST00000583927 NNATQ16517 81 aa9.03□□□□□ -0.96
SKA2-208ENST00000583927 GALNTL6Q49A17 601 aa9.03□□□□□ -0.96
SKA2-208ENST00000583927 ATP6AP1LQ52LC2 224 aa9.03□□□□□ -0.96
SKA2-208ENST00000583927 ZNF385BQ569K4 471 aa9.03□□□□□ -0.96
SKA2-208ENST00000583927 C6orf136Q5SQH8 315 aa9.03□□□□□ -0.96
SKA2-208ENST00000583927 CEP85LQ5SZL2 805 aa9.03□□□□□ -0.96
SKA2-208ENST00000583927 RIPPLY2Q5TAB7 128 aa9.03□□□□□ -0.96
SKA2-208ENST00000583927 VASNQ6EMK4 673 aa9.03□□□□□ -0.96
SKA2-208ENST00000583927 TMEM107Q6UX40 140 aa9.03□□□□□ -0.96
SKA2-208ENST00000583927 C3P1Q6ZMU1 363 aa9.03□□□□□ -0.96
SKA2-208ENST00000583927 LARP4Q71RC2 724 aaKnown RBP eCLIP9.03□□□□□ -0.961e-6■□□□□ 10.2
SKA2-208ENST00000583927 PLCZ1Q86YW0 608 aa9.03□□□□□ -0.96
SKA2-208ENST00000583927 SLC44A2Q8IWA5 706 aaPredicted RBP9.03□□□□□ -0.96
SKA2-208ENST00000583927 ULK2Q8IYT8 1036 aa9.03□□□□□ -0.96
SKA2-208ENST00000583927 WDSUB1Q8N9V3 476 aa9.03□□□□□ -0.96
SKA2-208ENST00000583927 CEP70Q8NHQ1 597 aa9.03□□□□□ -0.96
SKA2-208ENST00000583927 CDC26Q8NHZ8 85 aa9.03□□□□□ -0.96
SKA2-208ENST00000583927 PSMA8Q8TAA3 256 aa9.03□□□□□ -0.96
SKA2-208ENST00000583927 CA5BP1Q8WTZ4 195 aa9.03□□□□□ -0.96
SKA2-208ENST00000583927 MARVELD3Q96A59 401 aa9.03□□□□□ -0.96
SKA2-208ENST00000583927 SDCCAG3Q96C92 435 aa9.03□□□□□ -0.96
SKA2-208ENST00000583927 PPCDCQ96CD2 204 aa9.03□□□□□ -0.96
SKA2-208ENST00000583927 C3orf30Q96M34 536 aa9.03□□□□□ -0.96
SKA2-208ENST00000583927 JSRP1Q96MG2 331 aaPredicted RBP9.03□□□□□ -0.96
SKA2-208ENST00000583927 TSSK3Q96PN8 268 aa9.03□□□□□ -0.96
SKA2-208ENST00000583927 ADOQ96SZ5 270 aa9.03□□□□□ -0.96
SKA2-208ENST00000583927 TIMP4Q99727 224 aa9.03□□□□□ -0.96
SKA2-208ENST00000583927 SPOCK3Q9BQ16 436 aa9.03□□□□□ -0.96
SKA2-208ENST00000583927 OR2B2Q9GZK3 357 aa9.03□□□□□ -0.96
SKA2-208ENST00000583927 ENKD1Q9H0I2 346 aa9.03□□□□□ -0.96
SKA2-208ENST00000583927 HHATLQ9HCP6 504 aa9.03□□□□□ -0.96
SKA2-208ENST00000583927 Q9N2J8 555 aa9.03□□□□□ -0.96
SKA2-208ENST00000583927 DDX18Q9NVP1 670 aaKnown RBP9.03□□□□□ -0.96
SKA2-208ENST00000583927 KLRF1Q9NZS2 232 aa9.03□□□□□ -0.96
SKA2-208ENST00000583927 MRTO4Q9UKD2 239 aaKnown RBP9.03□□□□□ -0.96
SKA2-208ENST00000583927 CBLCQ9ULV8 474 aa9.03□□□□□ -0.96
SKA2-208ENST00000583927 RNF6Q9Y252 685 aa9.03□□□□□ -0.96
SKA2-208ENST00000583927 FIS1Q9Y3D6 152 aa9.03□□□□□ -0.96
SKA2-208ENST00000583927 WIF1Q9Y5W5 379 aa9.03□□□□□ -0.96
SKA2-208ENST00000583927 OTOGQ6ZRI0 2925 aa9.02□□□□□ -0.96
SKA2-208ENST00000583927 SCAMP2O15127 329 aaKnown RBP9.02□□□□□ -0.97
SKA2-208ENST00000583927 ERLIN1O75477 346 aa9.02□□□□□ -0.97
SKA2-208ENST00000583927 NKX2-2O95096 273 aa9.02□□□□□ -0.97
SKA2-208ENST00000583927 IL33O95760 270 aa9.02□□□□□ -0.97
SKA2-208ENST00000583927 EPPINO95925 133 aa9.02□□□□□ -0.97
SKA2-208ENST00000583927 ACTL6AO96019 429 aa9.02□□□□□ -0.97
SKA2-208ENST00000583927 MYZAPP0CAP1 466 aa9.02□□□□□ -0.97
SKA2-208ENST00000583927 GLI4P10075 376 aa9.02□□□□□ -0.97
SKA2-208ENST00000583927 PRPS1L1P21108 318 aa9.02□□□□□ -0.97
SKA2-208ENST00000583927 LCN1P31025 176 aa9.02□□□□□ -0.97
SKA2-208ENST00000583927 TIMP3P35625 211 aa9.02□□□□□ -0.97
SKA2-208ENST00000583927 HPCAL1P37235 193 aa9.02□□□□□ -0.97
SKA2-208ENST00000583927 MANFP55145 182 aaKnown RBP9.02□□□□□ -0.97
SKA2-208ENST00000583927 NUP107P57740 925 aa9.02□□□□□ -0.97
SKA2-208ENST00000583927 ABCE1P61221 599 aaKnown RBP9.02□□□□□ -0.97
SKA2-208ENST00000583927 ZNF155Q12901 538 aaPredicted RBP9.02□□□□□ -0.97
SKA2-208ENST00000583927 GAB1Q13480 694 aa9.02□□□□□ -0.97
SKA2-208ENST00000583927 DECR1Q16698 335 aa9.02□□□□□ -0.97
SKA2-208ENST00000583927 VPS26BQ4G0F5 336 aa9.02□□□□□ -0.97
SKA2-208ENST00000583927 EXOSC6Q5RKV6 272 aaKnown RBP9.02□□□□□ -0.97
SKA2-208ENST00000583927 C1orf185Q5T7R7 199 aa9.02□□□□□ -0.97
SKA2-208ENST00000583927 CES4AQ5XG92 561 aa9.02□□□□□ -0.97
SKA2-208ENST00000583927 DESI1Q6ICB0 168 aa9.02□□□□□ -0.97
SKA2-208ENST00000583927 ZNF585AQ6P3V2 769 aa9.02□□□□□ -0.97
SKA2-208ENST00000583927 ANGPTL8Q6UXH0 198 aa9.02□□□□□ -0.97
SKA2-208ENST00000583927 NCCRP1Q6ZVX7 275 aaPredicted RBP9.02□□□□□ -0.97
SKA2-208ENST00000583927 ZNF551Q7Z340 670 aaPredicted RBP9.02□□□□□ -0.97
SKA2-208ENST00000583927 CAMKMTQ7Z624 323 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms