RNA–Protein interactions for RNA: ENST00000582717.5

GGA3-214, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2 BASIC

Gene GGA3, Length 2,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-214ENST00000582717 SF3A2Q15428 464 aaKnown RBP12.81□□□□□ -0.36
GGA3-214ENST00000582717 BTBD16Q32M84 506 aa12.81□□□□□ -0.36
GGA3-214ENST00000582717 SMUG1Q53HV7 270 aa12.81□□□□□ -0.36
GGA3-214ENST00000582717 CCNJQ5T5M9 372 aa12.81□□□□□ -0.36
GGA3-214ENST00000582717 KIAA1161Q6NSJ0 714 aa12.81□□□□□ -0.36
GGA3-214ENST00000582717 LYPD8Q6UX82 237 aa12.81□□□□□ -0.36
GGA3-214ENST00000582717 GPR32P1Q8NGA4 272 aa12.81□□□□□ -0.36
GGA3-214ENST00000582717 NEURL3Q96EH8 262 aa12.81□□□□□ -0.36
GGA3-214ENST00000582717 C1GALT1C1Q96EU7 318 aa12.81□□□□□ -0.36
GGA3-214ENST00000582717 PRAP1Q96NZ9 151 aa12.81□□□□□ -0.36
GGA3-214ENST00000582717 F2RL3Q96RI0 385 aa12.81□□□□□ -0.36
GGA3-214ENST00000582717 COQ7Q99807 217 aa12.81□□□□□ -0.36
GGA3-214ENST00000582717 TIMM29Q9BSF4 260 aa12.81□□□□□ -0.36
GGA3-214ENST00000582717 MARVELD1Q9BSK0 173 aa12.81□□□□□ -0.36
GGA3-214ENST00000582717 BTBD1Q9H0C5 482 aa12.81□□□□□ -0.36
GGA3-214ENST00000582717 XKR8Q9H6D3 395 aa12.81□□□□□ -0.36
GGA3-214ENST00000582717 IMP3Q9NV31 184 aaKnown RBP12.81□□□□□ -0.36
GGA3-214ENST00000582717 TVP23BQ9NYZ1 205 aa12.81□□□□□ -0.36
GGA3-214ENST00000582717 MOSPD1Q9UJG1 213 aa12.81□□□□□ -0.36
GGA3-214ENST00000582717 SLC17A4Q9Y2C5 497 aa12.81□□□□□ -0.36
GGA3-214ENST00000582717 SF3B6Q9Y3B4 125 aaKnown RBP12.81□□□□□ -0.36
GGA3-214ENST00000582717 ASB4Q9Y574 426 aa12.81□□□□□ -0.36
GGA3-214ENST00000582717 A0A0X1KG70 313 aa12.81□□□□□ -0.36
GGA3-214ENST00000582717 ANKDD1BA6NHY2 528 aa12.81□□□□□ -0.36
GGA3-214ENST00000582717 PRR19A6NJB7 356 aa12.81□□□□□ -0.36
GGA3-214ENST00000582717 SGK494L7N484 410 aa12.81□□□□□ -0.36
GGA3-214ENST00000582717 LYRM1O43325 122 aa12.81□□□□□ -0.36
GGA3-214ENST00000582717 TLX2O43763 284 aaPredicted RBP12.81□□□□□ -0.36
GGA3-214ENST00000582717 KLF8O95600 359 aaPredicted RBP12.81□□□□□ -0.36
GGA3-214ENST00000582717 FAM157BP0CG42 384 aa12.81□□□□□ -0.36
GGA3-214ENST00000582717 HOXB2P14652 356 aa12.81□□□□□ -0.36
GGA3-214ENST00000582717 RAB40BQ12829 278 aa12.81□□□□□ -0.36
GGA3-214ENST00000582717 FOXD4Q12950 439 aaPredicted RBP12.81□□□□□ -0.36
GGA3-214ENST00000582717 CRTC2Q53ET0 693 aaPredicted RBP12.81□□□□□ -0.36
GGA3-214ENST00000582717 KHDRBS2Q5VWX1 349 aaKnown RBP12.81□□□□□ -0.36
GGA3-214ENST00000582717 CNIH2Q6PI25 160 aa12.81□□□□□ -0.36
GGA3-214ENST00000582717 CD200R1LQ6Q8B3 271 aa12.81□□□□□ -0.36
GGA3-214ENST00000582717 PAMR1Q6UXH9 720 aa12.81□□□□□ -0.36
GGA3-214ENST00000582717 WDR53Q7Z5U6 358 aaPredicted RBP12.81□□□□□ -0.36
GGA3-214ENST00000582717 ADGRF3Q8IZF5 1079 aa12.81□□□□□ -0.36
GGA3-214ENST00000582717 NATD1Q8N6N6 113 aa12.81□□□□□ -0.36
GGA3-214ENST00000582717 OR5H6Q8NGV6 325 aa12.81□□□□□ -0.36
GGA3-214ENST00000582717 OR52P1PQ8NH57 321 aa12.81□□□□□ -0.36
GGA3-214ENST00000582717 TMEM203Q969S6 136 aa12.81□□□□□ -0.36
GGA3-214ENST00000582717 ZNF582Q96NG8 517 aaPredicted RBP12.81□□□□□ -0.36
GGA3-214ENST00000582717 CAMK1GQ96NX5 476 aa12.81□□□□□ -0.36
GGA3-214ENST00000582717 TMEM121BQ9BXQ6 578 aaPredicted RBP12.81□□□□□ -0.36
GGA3-214ENST00000582717 EXOSC1Q9Y3B2 195 aaKnown RBP12.81□□□□□ -0.36
GGA3-214ENST00000582717 CCDC88CQ9P219 2028 aa12.8□□□□□ -0.36
GGA3-214ENST00000582717 SLC31A1O15431 190 aa12.8□□□□□ -0.36
GGA3-214ENST00000582717 PRKYO43930 277 aa12.8□□□□□ -0.36
GGA3-214ENST00000582717 NOS1APO75052 506 aaPredicted RBP12.8□□□□□ -0.36
GGA3-214ENST00000582717 CFL1P23528 166 aaKnown RBP12.8□□□□□ -0.36
GGA3-214ENST00000582717 APEX1P27695 318 aaKnown RBP12.8□□□□□ -0.36
GGA3-214ENST00000582717 HOXD11P31277 338 aaPredicted RBP12.8□□□□□ -0.36
GGA3-214ENST00000582717 SSTR4P31391 388 aa12.8□□□□□ -0.36
GGA3-214ENST00000582717 RPS25P62851 125 aaKnown RBP12.8□□□□□ -0.36
GGA3-214ENST00000582717 ANGPT1Q15389 498 aa12.8□□□□□ -0.36
GGA3-214ENST00000582717 FAM180BQ6P0A1 224 aa12.8□□□□□ -0.36
GGA3-214ENST00000582717 MTSS1LQ765P7 747 aa12.8□□□□□ -0.36
GGA3-214ENST00000582717 C11orf74Q86VG3 221 aa12.8□□□□□ -0.36
GGA3-214ENST00000582717 SLC38A5Q8WUX1 472 aa12.8□□□□□ -0.36
GGA3-214ENST00000582717 MARVELD3Q96A59 401 aa12.8□□□□□ -0.36
GGA3-214ENST00000582717 ZNF354BQ96LW1 612 aa12.8□□□□□ -0.36
GGA3-214ENST00000582717 CITED4Q96RK1 184 aa12.8□□□□□ -0.36
GGA3-214ENST00000582717 DHRS9Q9BPW9 319 aa12.8□□□□□ -0.36
GGA3-214ENST00000582717 TMEM43Q9BTV4 400 aa12.8□□□□□ -0.36
GGA3-214ENST00000582717 APOOQ9BUR5 198 aa12.8□□□□□ -0.36
GGA3-214ENST00000582717 PRRG3Q9BZD7 231 aa12.8□□□□□ -0.36
GGA3-214ENST00000582717 PCBD2Q9H0N5 130 aa12.8□□□□□ -0.36
GGA3-214ENST00000582717 CD93Q9NPY3 652 aa12.8□□□□□ -0.36
GGA3-214ENST00000582717 MIEF1Q9NQG6 463 aa12.8□□□□□ -0.36
GGA3-214ENST00000582717 SEMA3GQ9NS98 782 aa12.8□□□□□ -0.36
GGA3-214ENST00000582717 TAAR2Q9P1P5 351 aa12.8□□□□□ -0.36
GGA3-214ENST00000582717 ADAM30Q9UKF2 790 aa12.8□□□□□ -0.36
GGA3-214ENST00000582717 COL4A2P08572 1712 aa12.8□□□□□ -0.36
GGA3-214ENST00000582717 TBC1D3DA0A087WVF3 549 aa12.79□□□□□ -0.36
GGA3-214ENST00000582717 TBC1D3IA0A087WXS9 549 aa12.79□□□□□ -0.36
GGA3-214ENST00000582717 TBC1D3EA0A087X179 549 aa12.79□□□□□ -0.36
GGA3-214ENST00000582717 TBC1D3KA0A087X1G2 549 aa12.79□□□□□ -0.36
GGA3-214ENST00000582717 IGKV1-8A0A0C4DH67 115 aa12.79□□□□□ -0.36
GGA3-214ENST00000582717 TRDV1A0A1B0GX56 115 aa12.79□□□□□ -0.36
GGA3-214ENST00000582717 TBC1D3FA6NER0 549 aaPredicted RBP12.79□□□□□ -0.36
GGA3-214ENST00000582717 OR52A4PA6NMU1 304 aa12.79□□□□□ -0.36
GGA3-214ENST00000582717 C12orf71A8MTZ7 269 aa12.79□□□□□ -0.36
GGA3-214ENST00000582717 TBC1D3LB9A6J9 549 aa12.79□□□□□ -0.36
GGA3-214ENST00000582717 NME6O75414 186 aaPredicted RBP12.79□□□□□ -0.36
GGA3-214ENST00000582717 TP53P04637 393 aaPredicted RBP12.79□□□□□ -0.36
GGA3-214ENST00000582717 BCHEP06276 602 aa12.79□□□□□ -0.36
GGA3-214ENST00000582717 TBC1D3HP0C7X1 549 aa12.79□□□□□ -0.36
GGA3-214ENST00000582717 TNNI3P19429 210 aa12.79□□□□□ -0.36
GGA3-214ENST00000582717 IFNA8P32881 189 aa12.79□□□□□ -0.36
GGA3-214ENST00000582717 BSGP35613 385 aa12.79□□□□□ -0.36
GGA3-214ENST00000582717 MRPL28Q13084 256 aaKnown RBP12.79□□□□□ -0.36
GGA3-214ENST00000582717 FLYWCH1Q4VC44 716 aa12.79□□□□□ -0.36
GGA3-214ENST00000582717 ESCO2Q56NI9 601 aa12.79□□□□□ -0.36
GGA3-214ENST00000582717 TBC1D3GQ6DHY5 549 aa12.79□□□□□ -0.36
GGA3-214ENST00000582717 TBC1D3CQ6IPX1 549 aa12.79□□□□□ -0.36
GGA3-214ENST00000582717 MZT2AQ6P582 158 aa12.79□□□□□ -0.36
GGA3-214ENST00000582717 DEF8Q6ZN54 512 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms