RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 SGCBQ16585 318 aa11.42□□□□□ -0.58
SS18-219ENST00000581570 CCNYL2Q5T2Q4 361 aa11.42□□□□□ -0.58
SS18-219ENST00000581570 SLC48A1Q6P1K1 146 aa11.42□□□□□ -0.58
SS18-219ENST00000581570 LARP4Q71RC2 724 aaKnown RBP eCLIP11.42□□□□□ -0.58
SS18-219ENST00000581570 OR5M1Q8NGP8 315 aa11.42□□□□□ -0.58
SS18-219ENST00000581570 WDR20Q8TBZ3 569 aa11.42□□□□□ -0.58
SS18-219ENST00000581570 ACTRT1Q8TDG2 376 aa11.42□□□□□ -0.58
SS18-219ENST00000581570 GFM2Q969S9 779 aaKnown RBP11.42□□□□□ -0.58
SS18-219ENST00000581570 HS6ST2Q96MM7 605 aa11.42□□□□□ -0.58
SS18-219ENST00000581570 KCNK17Q96T54 332 aa11.42□□□□□ -0.58
SS18-219ENST00000581570 GPR22Q99680 433 aa11.42□□□□□ -0.58
SS18-219ENST00000581570 RHNO1Q9BSD3 238 aa11.42□□□□□ -0.58
SS18-219ENST00000581570 TACO1Q9BSH4 297 aaKnown RBP11.42□□□□□ -0.58
SS18-219ENST00000581570 NTMT1Q9BV86 223 aa11.42□□□□□ -0.58
SS18-219ENST00000581570 PRRG4Q9BZD6 226 aa11.42□□□□□ -0.58
SS18-219ENST00000581570 DDX47Q9H0S4 455 aaKnown RBP11.42□□□□□ -0.58
SS18-219ENST00000581570 OR10A4Q9H209 315 aa11.42□□□□□ -0.58
SS18-219ENST00000581570 PPP4R1LQ9P1A2 415 aa11.42□□□□□ -0.58
SS18-219ENST00000581570 TXNDC16Q9P2K2 825 aa11.42□□□□□ -0.58
SS18-219ENST00000581570 CES1P1Q9UKY3 287 aa11.42□□□□□ -0.58
SS18-219ENST00000581570 CLEC4AQ9UMR7 237 aa11.42□□□□□ -0.58
SS18-219ENST00000581570 GPR52Q9Y2T5 361 aa11.42□□□□□ -0.58
SS18-219ENST00000581570 JRKLQ9Y4A0 524 aa11.42□□□□□ -0.58
SS18-219ENST00000581570 PCDHA9Q9Y5H5 950 aa11.42□□□□□ -0.58
SS18-219ENST00000581570 ROS1P08922 2347 aa11.42□□□□□ -0.58
SS18-219ENST00000581570 A0A1W2PP18 115 aa11.41□□□□□ -0.58
SS18-219ENST00000581570 C1orf226A1L170 272 aa11.41□□□□□ -0.58
SS18-219ENST00000581570 OR2M5A3KFT3 312 aa11.41□□□□□ -0.58
SS18-219ENST00000581570 GOLGA6L6A8MZA4 724 aa11.41□□□□□ -0.58
SS18-219ENST00000581570 UGDHO60701 494 aa11.41□□□□□ -0.58
SS18-219ENST00000581570 KERAO60938 352 aa11.41□□□□□ -0.58
SS18-219ENST00000581570 NDUFS7O75251 213 aa11.41□□□□□ -0.58
SS18-219ENST00000581570 SEMA3DO95025 777 aa11.41□□□□□ -0.58
SS18-219ENST00000581570 PLGP00747 810 aaPredicted RBP11.41□□□□□ -0.58
SS18-219ENST00000581570 THBS1P07996 1170 aa11.41□□□□□ -0.58
SS18-219ENST00000581570 PCSK2P16519 638 aa11.41□□□□□ -0.58
SS18-219ENST00000581570 IL11P20809 199 aa11.41□□□□□ -0.58
SS18-219ENST00000581570 IL12BP29460 328 aa11.41□□□□□ -0.58
SS18-219ENST00000581570 PIK3CGP48736 1102 aa11.41□□□□□ -0.58
SS18-219ENST00000581570 CTBP2P56545 445 aa11.41□□□□□ -0.58
SS18-219ENST00000581570 FAPQ12884 760 aa11.41□□□□□ -0.58
SS18-219ENST00000581570 DLG1Q12959 904 aa11.41□□□□□ -0.58
SS18-219ENST00000581570 ZKSCAN8Q15776 578 aaPredicted RBP11.41□□□□□ -0.58
SS18-219ENST00000581570 CTU2Q2VPK5 515 aaKnown RBP11.41□□□□□ -0.58
SS18-219ENST00000581570 PPP4R4Q6NUP7 873 aa11.41□□□□□ -0.58
SS18-219ENST00000581570 BEND4Q6ZU67 534 aa11.41□□□□□ -0.58
SS18-219ENST00000581570 PAGE2Q7Z2X7 111 aa11.41□□□□□ -0.58
SS18-219ENST00000581570 METTL25Q8N6Q8 603 aa11.41□□□□□ -0.58
SS18-219ENST00000581570 FADS6Q8N9I5 356 aa11.41□□□□□ -0.58
SS18-219ENST00000581570 OR2M3Q8NG83 312 aa11.41□□□□□ -0.58
SS18-219ENST00000581570 RNF138Q8WVD3 245 aa11.41□□□□□ -0.58
SS18-219ENST00000581570 NMRAL1Q9HBL8 299 aa11.41□□□□□ -0.58
SS18-219ENST00000581570 BARX1Q9HBU1 254 aaPredicted RBP11.41□□□□□ -0.58
SS18-219ENST00000581570 AHSPQ9NZD4 102 aa11.41□□□□□ -0.58
SS18-219ENST00000581570 MED11Q9P086 117 aa11.41□□□□□ -0.58
SS18-219ENST00000581570 WHRNQ9P202 907 aa11.41□□□□□ -0.58
SS18-219ENST00000581570 ADAM29Q9UKF5 820 aa11.41□□□□□ -0.58
SS18-219ENST00000581570 PSME2Q9UL46 239 aa11.41□□□□□ -0.58
SS18-219ENST00000581570 RNF11Q9Y3C5 154 aa11.41□□□□□ -0.58
SS18-219ENST00000581570 EXPH5Q8NEV8 1989 aa11.41□□□□□ -0.58
SS18-219ENST00000581570 ANK2Q01484 3957 aa11.4□□□□□ -0.58
SS18-219ENST00000581570 CR1P17927 2039 aa11.4□□□□□ -0.58
SS18-219ENST00000581570 CXorf49A8MYA2 514 aaPredicted RBP11.4□□□□□ -0.58
SS18-219ENST00000581570 SCO2O43819 266 aa11.4□□□□□ -0.58
SS18-219ENST00000581570 GUCY1B2O75343 617 aa11.4□□□□□ -0.58
SS18-219ENST00000581570 BCAS2O75934 225 aaPredicted RBP11.4□□□□□ -0.58
SS18-219ENST00000581570 CD3EP07766 207 aa11.4□□□□□ -0.58
SS18-219ENST00000581570 CT45A8P0DMV1 189 aa11.4□□□□□ -0.58
SS18-219ENST00000581570 CT45A9P0DMV2 189 aa11.4□□□□□ -0.58
SS18-219ENST00000581570 MTHFD2P13995 350 aa11.4□□□□□ -0.58
SS18-219ENST00000581570 PSMB1P20618 241 aaKnown RBP11.4□□□□□ -0.58
SS18-219ENST00000581570 SLC6A8P48029 635 aa11.4□□□□□ -0.58
SS18-219ENST00000581570 MAPK12P53778 367 aa11.4□□□□□ -0.58
SS18-219ENST00000581570 PNLIPRP2P54317 469 aa11.4□□□□□ -0.58
SS18-219ENST00000581570 MRPS35P82673 323 aaKnown RBP11.4□□□□□ -0.58
SS18-219ENST00000581570 DUSP2Q05923 314 aa11.4□□□□□ -0.58
SS18-219ENST00000581570 GANABQ14697 944 aaKnown RBP11.4□□□□□ -0.58
SS18-219ENST00000581570 LTB4RQ15722 352 aa11.4□□□□□ -0.58
SS18-219ENST00000581570 CT45A2Q5DJT8 189 aa11.4□□□□□ -0.58
SS18-219ENST00000581570 RAPH1Q70E73 1250 aa11.4□□□□□ -0.58
SS18-219ENST00000581570 STK32CQ86UX6 486 aa11.4□□□□□ -0.58
SS18-219ENST00000581570 L3MBTL4Q8NA19 623 aa11.4□□□□□ -0.58
SS18-219ENST00000581570 CDKL2Q92772 493 aa11.4□□□□□ -0.58
SS18-219ENST00000581570 NEUROG1Q92886 237 aa11.4□□□□□ -0.58
SS18-219ENST00000581570 GMPPAQ96IJ6 420 aaPredicted RBP11.4□□□□□ -0.58
SS18-219ENST00000581570 BTBD9Q96Q07 612 aa11.4□□□□□ -0.58
SS18-219ENST00000581570 RBBP8Q99708 897 aa11.4□□□□□ -0.58
SS18-219ENST00000581570 CPNE1Q99829 537 aa11.4□□□□□ -0.58
SS18-219ENST00000581570 IPPKQ9H8X2 491 aa11.4□□□□□ -0.58
SS18-219ENST00000581570 TMEM160Q9NX00 188 aa11.4□□□□□ -0.58
SS18-219ENST00000581570 LPAR3Q9UBY5 353 aa11.4□□□□□ -0.58
SS18-219ENST00000581570 GDF2Q9UK05 429 aaPredicted RBP11.4□□□□□ -0.58
SS18-219ENST00000581570 AP4B1Q9Y6B7 739 aa11.4□□□□□ -0.58
SS18-219ENST00000581570 IGHV4-30-2A0A087WSY4 118 aa11.39□□□□□ -0.59
SS18-219ENST00000581570 WIPF1O43516 503 aa11.39□□□□□ -0.59
SS18-219ENST00000581570 SSX4O60224 188 aa11.39□□□□□ -0.59
SS18-219ENST00000581570 SS18L1O75177 396 aaPredicted RBP11.39□□□□□ -0.59
SS18-219ENST00000581570 NME6O75414 186 aaPredicted RBP11.39□□□□□ -0.59
SS18-219ENST00000581570 FESP07332 822 aa11.39□□□□□ -0.59
SS18-219ENST00000581570 THBS2P35442 1172 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms