RNA–Protein interactions for RNA: ENST00000581226.1

SMCHD1-204, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 459 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-204ENST00000581226 ERVK-6Q9BXR3 956 aa3.26□□□□□ -1.89
SMCHD1-204ENST00000581226 EXOSC3Q9NQT5 275 aaKnown RBP3.26□□□□□ -1.89
SMCHD1-204ENST00000581226 IL19Q9UHD0 177 aa3.26□□□□□ -1.89
SMCHD1-204ENST00000581226 KLHL21Q9UJP4 597 aa3.26□□□□□ -1.89
SMCHD1-204ENST00000581226 NUDT21O43809 227 aaKnown RBP3.25□□□□□ -1.89
SMCHD1-204ENST00000581226 NOL4O94818 638 aa3.25□□□□□ -1.89
SMCHD1-204ENST00000581226 TOXO94900 526 aa3.25□□□□□ -1.89
SMCHD1-204ENST00000581226 BAG2O95816 211 aa3.25□□□□□ -1.89
SMCHD1-204ENST00000581226 SLC35G4P0C7Q5 338 aa3.25□□□□□ -1.89
SMCHD1-204ENST00000581226 ZCCHC18P0CG32 403 aa3.25□□□□□ -1.89
SMCHD1-204ENST00000581226 P2RY4P51582 365 aa3.25□□□□□ -1.89
SMCHD1-204ENST00000581226 YBEYP58557 167 aaPredicted RBP3.25□□□□□ -1.89
SMCHD1-204ENST00000581226 OVGP1Q12889 678 aa3.25□□□□□ -1.89
SMCHD1-204ENST00000581226 ZSWIM7Q19AV6 140 aa3.25□□□□□ -1.89
SMCHD1-204ENST00000581226 ISXQ2M1V0 245 aa3.25□□□□□ -1.89
SMCHD1-204ENST00000581226 LRIT3Q3SXY7 679 aa3.25□□□□□ -1.89
SMCHD1-204ENST00000581226 GLYR1Q49A26 553 aaPredicted RBP3.25□□□□□ -1.89
SMCHD1-204ENST00000581226 CCDC40Q4G0X9 1142 aa3.25□□□□□ -1.89
SMCHD1-204ENST00000581226 C9orf129Q5T035 196 aaKnown RBP3.25□□□□□ -1.89
SMCHD1-204ENST00000581226 OR6B2Q6IFH4 312 aa3.25□□□□□ -1.89
SMCHD1-204ENST00000581226 PNCKQ6P2M8 343 aa3.25□□□□□ -1.89
SMCHD1-204ENST00000581226 FAM159AQ6UWV7 190 aa3.25□□□□□ -1.89
SMCHD1-204ENST00000581226 OLFM4Q6UX06 510 aa3.25□□□□□ -1.89
SMCHD1-204ENST00000581226 C1orf186Q6ZWK4 172 aa3.25□□□□□ -1.89
SMCHD1-204ENST00000581226 Q8N7P7 452 aa3.25□□□□□ -1.89
SMCHD1-204ENST00000581226 OR13F1Q8NGS4 319 aa3.25□□□□□ -1.89
SMCHD1-204ENST00000581226 NSMCE2Q96MF7 247 aa3.25□□□□□ -1.89
SMCHD1-204ENST00000581226 XPO4Q9C0E2 1151 aaKnown RBP3.25□□□□□ -1.89
SMCHD1-204ENST00000581226 PDFQ9HBH1 243 aa3.25□□□□□ -1.89
SMCHD1-204ENST00000581226 DUS2Q9NX74 493 aaKnown RBP3.25□□□□□ -1.89
SMCHD1-204ENST00000581226 ELOVL2Q9NXB9 296 aa3.25□□□□□ -1.89
SMCHD1-204ENST00000581226 KLRF1Q9NZS2 232 aa3.25□□□□□ -1.89
SMCHD1-204ENST00000581226 GHRLQ9UBU3 117 aa3.25□□□□□ -1.89
SMCHD1-204ENST00000581226 CCPG1Q9ULG6 757 aa3.25□□□□□ -1.89
SMCHD1-204ENST00000581226 ZNF490Q9ULM2 529 aaPredicted RBP3.25□□□□□ -1.89
SMCHD1-204ENST00000581226 KNSTRNQ9Y448 316 aa3.25□□□□□ -1.89
SMCHD1-204ENST00000581226 CFAP65Q6ZU64 1925 aaKnown RBP3.25□□□□□ -1.89
SMCHD1-204ENST00000581226 GRIN2DO15399 1336 aa3.24□□□□□ -1.89
SMCHD1-204ENST00000581226 CFAP73A6NFT4 308 aa3.24□□□□□ -1.89
SMCHD1-204ENST00000581226 ZBTB14O43829 449 aa3.24□□□□□ -1.89
SMCHD1-204ENST00000581226 IGFBP1P08833 259 aaPredicted RBP3.24□□□□□ -1.89
SMCHD1-204ENST00000581226 PRDX6P30041 224 aa3.24□□□□□ -1.89
SMCHD1-204ENST00000581226 AKT2P31751 481 aa3.24□□□□□ -1.89
SMCHD1-204ENST00000581226 SFNP31947 248 aa3.24□□□□□ -1.89
SMCHD1-204ENST00000581226 HSPA1LP34931 641 aa3.24□□□□□ -1.89
SMCHD1-204ENST00000581226 PKN2Q16513 984 aaKnown RBP3.24□□□□□ -1.89
SMCHD1-204ENST00000581226 CAMK4Q16566 473 aa3.24□□□□□ -1.89
SMCHD1-204ENST00000581226 HACD2Q6Y1H2 254 aa3.24□□□□□ -1.89
SMCHD1-204ENST00000581226 TMEM26Q6ZUK4 368 aa3.24□□□□□ -1.89
SMCHD1-204ENST00000581226 GPR65Q8IYL9 337 aa3.24□□□□□ -1.89
SMCHD1-204ENST00000581226 ARFGAP2Q8N6H7 521 aa3.24□□□□□ -1.89
SMCHD1-204ENST00000581226 TADA1Q96BN2 335 aa3.24□□□□□ -1.89
SMCHD1-204ENST00000581226 KIR2DL4Q99706 377 aa3.24□□□□□ -1.89
SMCHD1-204ENST00000581226 ABCG8Q9H221 673 aa3.24□□□□□ -1.89
SMCHD1-204ENST00000581226 MEPEQ9NQ76 525 aaPredicted RBP3.24□□□□□ -1.89
SMCHD1-204ENST00000581226 ANO10Q9NW15 660 aa3.24□□□□□ -1.89
SMCHD1-204ENST00000581226 CLIP2Q9UDT6 1046 aa3.24□□□□□ -1.89
SMCHD1-204ENST00000581226 NUDCQ9Y266 331 aa3.24□□□□□ -1.89
SMCHD1-204ENST00000581226 SPAG9O60271 1321 aaKnown RBP3.23□□□□□ -1.89
SMCHD1-204ENST00000581226 IGLV8-61A0A075B6I0 122 aa3.23□□□□□ -1.89
SMCHD1-204ENST00000581226 EPOPA6NHQ4 379 aa3.23□□□□□ -1.89
SMCHD1-204ENST00000581226 FAM220BPB1ANY3 271 aa3.23□□□□□ -1.89
SMCHD1-204ENST00000581226 IMPA2O14732 288 aa3.23□□□□□ -1.89
SMCHD1-204ENST00000581226 HDAC3O15379 428 aa3.23□□□□□ -1.89
SMCHD1-204ENST00000581226 ADAM12O43184 909 aa3.23□□□□□ -1.89
SMCHD1-204ENST00000581226 LYPD3O95274 346 aa3.23□□□□□ -1.89
SMCHD1-204ENST00000581226 CCDC192P0DO97 292 aa3.23□□□□□ -1.89
SMCHD1-204ENST00000581226 IGHV1-2P23083 117 aa3.23□□□□□ -1.89
SMCHD1-204ENST00000581226 USP6P35125 1406 aa3.23□□□□□ -1.89
SMCHD1-204ENST00000581226 KRTAP12-2P59991 146 aa3.23□□□□□ -1.89
SMCHD1-204ENST00000581226 MRPS6P82932 125 aaKnown RBP3.23□□□□□ -1.89
SMCHD1-204ENST00000581226 WASHC5Q12768 1159 aa3.23□□□□□ -1.89
SMCHD1-204ENST00000581226 ZP4Q12836 540 aa3.23□□□□□ -1.89
SMCHD1-204ENST00000581226 PAGE2BQ5JRK9 111 aa3.23□□□□□ -1.89
SMCHD1-204ENST00000581226 LEG1Q6P5S2 330 aa3.23□□□□□ -1.89
SMCHD1-204ENST00000581226 PARGQ86W56 976 aa3.23□□□□□ -1.89
SMCHD1-204ENST00000581226 ZNF677Q86XU0 584 aa3.23□□□□□ -1.89
SMCHD1-204ENST00000581226 CADM2Q8N3J6 435 aa3.23□□□□□ -1.89
SMCHD1-204ENST00000581226 SLC13A3Q8WWT9 602 aa3.23□□□□□ -1.89
SMCHD1-204ENST00000581226 ART4Q93070 314 aa3.23□□□□□ -1.89
SMCHD1-204ENST00000581226 MAGEB18Q96M61 343 aa3.23□□□□□ -1.89
SMCHD1-204ENST00000581226 TM2D1Q9BX74 207 aa3.23□□□□□ -1.89
SMCHD1-204ENST00000581226 TSSK1BQ9BXA7 367 aa3.23□□□□□ -1.89
SMCHD1-204ENST00000581226 GDAP2Q9NXN4 497 aa3.23□□□□□ -1.89
SMCHD1-204ENST00000581226 APOBEC3BQ9UH17 382 aaKnown RBP3.23□□□□□ -1.89
SMCHD1-204ENST00000581226 MOSPD1Q9UJG1 213 aa3.23□□□□□ -1.89
SMCHD1-204ENST00000581226 PLA2G4CQ9UP65 541 aa3.23□□□□□ -1.89
SMCHD1-204ENST00000581226 MTF2Q9Y483 593 aaPredicted RBP3.23□□□□□ -1.89
SMCHD1-204ENST00000581226 RALAP11233 206 aa3.22□□□□□ -1.89
SMCHD1-204ENST00000581226 TSPAN8P19075 237 aa3.22□□□□□ -1.89
SMCHD1-204ENST00000581226 PTBP1P26599 531 aaKnown RBP eCLIP3.22□□□□□ -1.89
SMCHD1-204ENST00000581226 PRDX2P32119 198 aa3.22□□□□□ -1.89
SMCHD1-204ENST00000581226 RPS6P62753 249 aaKnown RBP3.22□□□□□ -1.89
SMCHD1-204ENST00000581226 SNX1Q13596 522 aa3.22□□□□□ -1.89
SMCHD1-204ENST00000581226 SLX4IPQ5VYV7 408 aa3.22□□□□□ -1.89
SMCHD1-204ENST00000581226 DMKNQ6E0U4 476 aaPredicted RBP3.22□□□□□ -1.89
SMCHD1-204ENST00000581226 ZNF562Q6V9R5 426 aa3.22□□□□□ -1.89
SMCHD1-204ENST00000581226 PAQR9Q6ZVX9 377 aa3.22□□□□□ -1.89
SMCHD1-204ENST00000581226 NET1Q7Z628 596 aaPredicted RBP3.22□□□□□ -1.89
SMCHD1-204ENST00000581226 C9orf40Q8IXQ3 194 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms