RNA–Protein interactions for RNA: ENST00000580182.5

PPP4R1-215, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-215ENST00000580182 TMEM41AQ96HV5 264 aa17.07■□□□□ 0.32
PPP4R1-215ENST00000580182 DUSP26Q9BV47 211 aa17.07■□□□□ 0.32
PPP4R1-215ENST00000580182 OSBPL11Q9BXB4 747 aa17.07■□□□□ 0.32
PPP4R1-215ENST00000580182 SLC6A15Q9H2J7 730 aa17.07■□□□□ 0.32
PPP4R1-215ENST00000580182 LDAHQ9H6V9 325 aa17.07■□□□□ 0.32
PPP4R1-215ENST00000580182 KLRF1Q9NZS2 232 aa17.07■□□□□ 0.32
PPP4R1-215ENST00000580182 FLRT3Q9NZU0 649 aa17.07■□□□□ 0.32
PPP4R1-215ENST00000580182 NTMQ9P121 344 aa17.07■□□□□ 0.32
PPP4R1-215ENST00000580182 CBLCQ9ULV8 474 aa17.07■□□□□ 0.32
PPP4R1-215ENST00000580182 DIDO1Q9BTC0 2240 aaKnown RBP17.06■□□□□ 0.32
PPP4R1-215ENST00000580182 FLNBO75369 2602 aaKnown RBP17.06■□□□□ 0.32
PPP4R1-215ENST00000580182 A0A1B0GVC2 190 aa17.06■□□□□ 0.32
PPP4R1-215ENST00000580182 ADAM10O14672 748 aa17.06■□□□□ 0.32
PPP4R1-215ENST00000580182 KLF11O14901 512 aa17.06■□□□□ 0.32
PPP4R1-215ENST00000580182 HDAC3O15379 428 aa17.06■□□□□ 0.32
PPP4R1-215ENST00000580182 EMC8O43402 210 aa17.06■□□□□ 0.32
PPP4R1-215ENST00000580182 ALDOCP09972 364 aaKnown RBP17.06■□□□□ 0.32
PPP4R1-215ENST00000580182 ACP2P11117 423 aa17.06■□□□□ 0.32
PPP4R1-215ENST00000580182 DDX5P17844 614 aaKnown RBP17.06■□□□□ 0.32
PPP4R1-215ENST00000580182 ENDOUP21128 410 aaKnown RBP17.06■□□□□ 0.32
PPP4R1-215ENST00000580182 GDF1P27539 372 aa17.06■□□□□ 0.32
PPP4R1-215ENST00000580182 EPHA3P29320 983 aa17.06■□□□□ 0.32
PPP4R1-215ENST00000580182 GABRA3P34903 492 aa17.06■□□□□ 0.32
PPP4R1-215ENST00000580182 MAP3K8P41279 467 aa17.06■□□□□ 0.32
PPP4R1-215ENST00000580182 TRPC1P48995 793 aa17.06■□□□□ 0.32
PPP4R1-215ENST00000580182 PNLIPRP2P54317 469 aa17.06■□□□□ 0.32
PPP4R1-215ENST00000580182 C21orf58P58505 322 aa17.06■□□□□ 0.32
PPP4R1-215ENST00000580182 ZNHIT3Q15649 155 aaPredicted RBP17.06■□□□□ 0.32
PPP4R1-215ENST00000580182 EMC4Q5J8M3 183 aa17.06■□□□□ 0.32
PPP4R1-215ENST00000580182 OR4F3Q6IEY1 312 aa17.06■□□□□ 0.32
PPP4R1-215ENST00000580182 SLC30A6Q6NXT4 461 aa17.06■□□□□ 0.32
PPP4R1-215ENST00000580182 ANGPTL8Q6UXH0 198 aa17.06■□□□□ 0.32
PPP4R1-215ENST00000580182 MAVSQ7Z434 540 aa17.06■□□□□ 0.32
PPP4R1-215ENST00000580182 OR5P2Q8WZ92 322 aa17.06■□□□□ 0.32
PPP4R1-215ENST00000580182 TMCO6Q96DC7 493 aa17.06■□□□□ 0.32
PPP4R1-215ENST00000580182 PRPF18Q99633 342 aaKnown RBP17.06■□□□□ 0.32
PPP4R1-215ENST00000580182 YIPF4Q9BSR8 244 aa17.06■□□□□ 0.32
PPP4R1-215ENST00000580182 BHLHE41Q9C0J9 482 aaPredicted RBP17.06■□□□□ 0.32
PPP4R1-215ENST00000580182 UBQLN3Q9H347 655 aa17.06■□□□□ 0.32
PPP4R1-215ENST00000580182 CXorf36Q9H7Y0 433 aa17.06■□□□□ 0.32
PPP4R1-215ENST00000580182 C3orf14Q9HBI5 128 aa17.06■□□□□ 0.32
PPP4R1-215ENST00000580182 Q9N2J8 555 aa17.06■□□□□ 0.32
PPP4R1-215ENST00000580182 ATAD3AQ9NVI7 634 aa17.06■□□□□ 0.32
PPP4R1-215ENST00000580182 SPRR3Q9UBC9 169 aa17.06■□□□□ 0.32
PPP4R1-215ENST00000580182 MEMO1Q9Y316 297 aa17.06■□□□□ 0.32
PPP4R1-215ENST00000580182 SNX8Q9Y5X2 465 aa17.06■□□□□ 0.32
PPP4R1-215ENST00000580182 USP9YO00507 2555 aaPredicted RBP17.06■□□□□ 0.32
PPP4R1-215ENST00000580182 TRGV5A0A0B4J1U4 118 aa17.05■□□□□ 0.32
PPP4R1-215ENST00000580182 C17orf51A8MQB3 221 aa17.05■□□□□ 0.32
PPP4R1-215ENST00000580182 ANKRD28O15084 1053 aa17.05■□□□□ 0.32
PPP4R1-215ENST00000580182 ABCB7O75027 752 aa17.05■□□□□ 0.32
PPP4R1-215ENST00000580182 IGKV1D-16P01601 117 aa17.05■□□□□ 0.32
PPP4R1-215ENST00000580182 ESRRAP11474 423 aaPredicted RBP17.05■□□□□ 0.32
PPP4R1-215ENST00000580182 PTPN6P29350 595 aa17.05■□□□□ 0.32
PPP4R1-215ENST00000580182 RFX3P48380 749 aa17.05■□□□□ 0.32
PPP4R1-215ENST00000580182 MAN2A2P49641 1150 aa17.05■□□□□ 0.32
PPP4R1-215ENST00000580182 NME5P56597 212 aa17.05■□□□□ 0.32
PPP4R1-215ENST00000580182 WNT3P56703 355 aa17.05■□□□□ 0.32
PPP4R1-215ENST00000580182 ADORA2A-AS1P86434 159 aa17.05■□□□□ 0.32
PPP4R1-215ENST00000580182 EFR3AQ14156 821 aa17.05■□□□□ 0.32
PPP4R1-215ENST00000580182 CYP27C1Q4G0S4 372 aa17.05■□□□□ 0.32
PPP4R1-215ENST00000580182 SLC9B1Q4ZJI4 515 aa17.05■□□□□ 0.32
PPP4R1-215ENST00000580182 TIGD3Q6B0B8 471 aa17.05■□□□□ 0.32
PPP4R1-215ENST00000580182 CAMKMTQ7Z624 323 aa17.05■□□□□ 0.32
PPP4R1-215ENST00000580182 CLECL1Q8IZS7 167 aa17.05■□□□□ 0.32
PPP4R1-215ENST00000580182 GOLGA6L1Q8N7Z2 621 aa17.05■□□□□ 0.32
PPP4R1-215ENST00000580182 WDSUB1Q8N9V3 476 aa17.05■□□□□ 0.32
PPP4R1-215ENST00000580182 SLC16A11Q8NCK7 471 aa17.05■□□□□ 0.32
PPP4R1-215ENST00000580182 OR5M9Q8NGP3 310 aa17.05■□□□□ 0.32
PPP4R1-215ENST00000580182 OR1J4Q8NGS1 313 aa17.05■□□□□ 0.32
PPP4R1-215ENST00000580182 CEP70Q8NHQ1 597 aa17.05■□□□□ 0.32
PPP4R1-215ENST00000580182 GPR151Q8TDV0 419 aa17.05■□□□□ 0.32
PPP4R1-215ENST00000580182 SLC9A6Q92581 669 aa17.05■□□□□ 0.32
PPP4R1-215ENST00000580182 HOXB13Q92826 284 aaPredicted RBP17.05■□□□□ 0.32
PPP4R1-215ENST00000580182 MS4A4EQ96PG1 132 aa17.05■□□□□ 0.32
PPP4R1-215ENST00000580182 DPY30Q9C005 99 aa17.05■□□□□ 0.32
PPP4R1-215ENST00000580182 EXO5Q9H790 373 aa17.05■□□□□ 0.32
PPP4R1-215ENST00000580182 PNPLA3Q9NST1 481 aa17.05■□□□□ 0.32
PPP4R1-215ENST00000580182 ZCCHC3Q9NUD5 404 aaKnown RBP17.05■□□□□ 0.32
PPP4R1-215ENST00000580182 SUCOQ9UBS9 1254 aaKnown RBP17.05■□□□□ 0.32
PPP4R1-215ENST00000580182 B4GALT7Q9UBV7 327 aa17.05■□□□□ 0.32
PPP4R1-215ENST00000580182 PLEKHB1Q9UF11 243 aaPredicted RBP17.05■□□□□ 0.32
PPP4R1-215ENST00000580182 MAPRE3Q9UPY8 281 aa17.05■□□□□ 0.32
PPP4R1-215ENST00000580182 C15orf41Q9Y2V0 281 aa17.05■□□□□ 0.32
PPP4R1-215ENST00000580182 ICE1Q9Y2F5 2266 aa17.05■□□□□ 0.32
PPP4R1-215ENST00000580182 DNAJC13O75165 2243 aa17.04■□□□□ 0.32
PPP4R1-215ENST00000580182 TRPC5OSA6NMA1 111 aa17.04■□□□□ 0.32
PPP4R1-215ENST00000580182 AQP7O14520 342 aa17.04■□□□□ 0.32
PPP4R1-215ENST00000580182 ZNF195O14628 629 aa17.04■□□□□ 0.32
PPP4R1-215ENST00000580182 SNPHO15079 494 aa17.04■□□□□ 0.32
PPP4R1-215ENST00000580182 SUSD5O60279 629 aa17.04■□□□□ 0.32
PPP4R1-215ENST00000580182 TRAPPC6AO75865 159 aa17.04■□□□□ 0.32
PPP4R1-215ENST00000580182 NKX2-2O95096 273 aa17.04■□□□□ 0.32
PPP4R1-215ENST00000580182 PSPHP78330 225 aa17.04■□□□□ 0.32
PPP4R1-215ENST00000580182 SNTA1Q13424 505 aa17.04■□□□□ 0.32
PPP4R1-215ENST00000580182 DECR1Q16698 335 aa17.04■□□□□ 0.32
PPP4R1-215ENST00000580182 GXYLT1Q4G148 440 aa17.04■□□□□ 0.32
PPP4R1-215ENST00000580182 OGFOD2Q6N063 350 aa17.04■□□□□ 0.32
PPP4R1-215ENST00000580182 MFSD12Q6NUT3 480 aa17.04■□□□□ 0.32
PPP4R1-215ENST00000580182 GALNT10Q86SR1 603 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms