RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 PLCXD3Q63HM9 321 aa2.81□□□□□ -1.96
KPNB1-208ENST00000580019 TYW3Q6IPR3 259 aaKnown RBP2.81□□□□□ -1.96
KPNB1-208ENST00000580019 P4HA3Q7Z4N8 544 aa2.81□□□□□ -1.96
KPNB1-208ENST00000580019 VTCN1Q7Z7D3 282 aa2.81□□□□□ -1.96
KPNB1-208ENST00000580019 C17orf64Q86WR6 236 aa2.81□□□□□ -1.96
KPNB1-208ENST00000580019 MICU2Q8IYU8 434 aa2.81□□□□□ -1.96
KPNB1-208ENST00000580019 ZNF34Q8IZ26 560 aa2.81□□□□□ -1.96
KPNB1-208ENST00000580019 CDK20Q8IZL9 346 aa2.81□□□□□ -1.96
KPNB1-208ENST00000580019 RNF113BQ8IZP6 322 aaKnown RBP2.81□□□□□ -1.96
KPNB1-208ENST00000580019 OR5AU1Q8NGC0 362 aa2.81□□□□□ -1.96
KPNB1-208ENST00000580019 OR11H4Q8NGC9 324 aa2.81□□□□□ -1.96
KPNB1-208ENST00000580019 OR4C15Q8NGM1 316 aa2.81□□□□□ -1.96
KPNB1-208ENST00000580019 GRHL3Q8TE85 626 aa2.81□□□□□ -1.96
KPNB1-208ENST00000580019 GLYATL2Q8WU03 294 aa2.81□□□□□ -1.96
KPNB1-208ENST00000580019 SLC38A5Q8WUX1 472 aa2.81□□□□□ -1.96
KPNB1-208ENST00000580019 ASB5Q8WWX0 329 aa2.81□□□□□ -1.96
KPNB1-208ENST00000580019 PIGCQ92535 297 aa2.81□□□□□ -1.96
KPNB1-208ENST00000580019 P3H4Q92791 437 aa2.81□□□□□ -1.96
KPNB1-208ENST00000580019 MYLPFQ96A32 169 aa2.81□□□□□ -1.96
KPNB1-208ENST00000580019 CIDECQ96AQ7 238 aaPredicted RBP2.81□□□□□ -1.96
KPNB1-208ENST00000580019 TMIGD2Q96BF3 282 aa2.81□□□□□ -1.96
KPNB1-208ENST00000580019 SH3YL1Q96HL8 342 aaPredicted RBP2.81□□□□□ -1.96
KPNB1-208ENST00000580019 ARL5BQ96KC2 179 aa2.81□□□□□ -1.96
KPNB1-208ENST00000580019 INPP4AQ96PE3 977 aaPredicted RBP2.81□□□□□ -1.96
KPNB1-208ENST00000580019 CDCA3Q99618 268 aaPredicted RBP2.81□□□□□ -1.96
KPNB1-208ENST00000580019 RTP3Q9BQQ7 232 aa2.81□□□□□ -1.96
KPNB1-208ENST00000580019 CCM2Q9BSQ5 444 aa2.81□□□□□ -1.96
KPNB1-208ENST00000580019 URM1Q9BTM9 101 aaKnown RBP2.81□□□□□ -1.96
KPNB1-208ENST00000580019 TRAF4Q9BUZ4 470 aaPredicted RBP2.81□□□□□ -1.96
KPNB1-208ENST00000580019 SPATA16Q9BXB7 569 aa2.81□□□□□ -1.96
KPNB1-208ENST00000580019 SYNDIG1Q9H7V2 258 aa2.81□□□□□ -1.96
KPNB1-208ENST00000580019 GEMIN7Q9H840 131 aaKnown RBP2.81□□□□□ -1.96
KPNB1-208ENST00000580019 MAP6D1Q9H9H5 199 aa2.81□□□□□ -1.96
KPNB1-208ENST00000580019 PARVGQ9HBI0 331 aa2.81□□□□□ -1.96
KPNB1-208ENST00000580019 MCCC2Q9HCC0 563 aa2.81□□□□□ -1.96
KPNB1-208ENST00000580019 ZNF160Q9HCG1 818 aa2.81□□□□□ -1.96
KPNB1-208ENST00000580019 RNF186Q9NXI6 227 aa2.81□□□□□ -1.96
KPNB1-208ENST00000580019 PDP1Q9P0J1 537 aaPredicted RBP2.81□□□□□ -1.96
KPNB1-208ENST00000580019 DBF4Q9UBU7 674 aaPredicted RBP2.81□□□□□ -1.96
KPNB1-208ENST00000580019 MIOXQ9UGB7 285 aa2.81□□□□□ -1.96
KPNB1-208ENST00000580019 PILRAQ9UKJ1 303 aa2.81□□□□□ -1.96
KPNB1-208ENST00000580019 ANGPTL2Q9UKU9 493 aa2.81□□□□□ -1.96
KPNB1-208ENST00000580019 ZNF346Q9UL40 294 aaKnown RBP2.81□□□□□ -1.96
KPNB1-208ENST00000580019 DIMT1Q9UNQ2 313 aaKnown RBP2.81□□□□□ -1.96
KPNB1-208ENST00000580019 BZW2Q9Y6E2 419 aaKnown RBP2.81□□□□□ -1.96
KPNB1-208ENST00000580019 RNF215Q9Y6U7 377 aa2.81□□□□□ -1.96
KPNB1-208ENST00000580019 KIAA0232Q92628 1395 aa2.81□□□□□ -1.96
KPNB1-208ENST00000580019 NAIPQ13075 1403 aa2.81□□□□□ -1.96
KPNB1-208ENST00000580019 ERBINQ96RT1 1412 aa2.81□□□□□ -1.96
KPNB1-208ENST00000580019 TNRC6CQ9HCJ0 1690 aaKnown RBP2.81□□□□□ -1.96
KPNB1-208ENST00000580019 ADAMTS7Q9UKP4 1686 aa2.81□□□□□ -1.96
KPNB1-208ENST00000580019 PARP4Q9UKK3 1724 aaKnown RBP2.81□□□□□ -1.96
KPNB1-208ENST00000580019 UNC80Q8N2C7 3258 aa2.81□□□□□ -1.96
KPNB1-208ENST00000580019 ARID2Q68CP9 1835 aa2.8□□□□□ -1.96
KPNB1-208ENST00000580019 MEGF6O75095 1541 aa2.8□□□□□ -1.96
KPNB1-208ENST00000580019 BCL9O00512 1426 aa2.8□□□□□ -1.96
KPNB1-208ENST00000580019 BRD4O60885 1362 aaPredicted RBP2.8□□□□□ -1.96
KPNB1-208ENST00000580019 CCDC7Q96M83 1385 aa2.8□□□□□ -1.96
KPNB1-208ENST00000580019 WDR17Q8IZU2 1322 aa2.8□□□□□ -1.96
KPNB1-208ENST00000580019 TRAV25A0A0B4J276 109 aa2.8□□□□□ -1.96
KPNB1-208ENST00000580019 TEX13DA0A0J9YY54 714 aaPredicted RBP2.8□□□□□ -1.96
KPNB1-208ENST00000580019 A0A1B0GVL5 298 aa2.8□□□□□ -1.96
KPNB1-208ENST00000580019 hDV102S1A0JD36 115 aa2.8□□□□□ -1.96
KPNB1-208ENST00000580019 A6NNC1 897 aa2.8□□□□□ -1.96
KPNB1-208ENST00000580019 WASHC1A8K0Z3 465 aa2.8□□□□□ -1.96
KPNB1-208ENST00000580019 A8MU76 341 aa2.8□□□□□ -1.96
KPNB1-208ENST00000580019 ZNF732B4DXR9 585 aa2.8□□□□□ -1.96
KPNB1-208ENST00000580019 PSMD11O00231 422 aa2.8□□□□□ -1.96
KPNB1-208ENST00000580019 CCSO14618 274 aa2.8□□□□□ -1.96
KPNB1-208ENST00000580019 POLR1CO15160 346 aaPredicted RBP2.8□□□□□ -1.96
KPNB1-208ENST00000580019 CFLARO15519 480 aa2.8□□□□□ -1.96
KPNB1-208ENST00000580019 TIMM8AO60220 97 aaPredicted RBP2.8□□□□□ -1.96
KPNB1-208ENST00000580019 ZNF254O75437 659 aa2.8□□□□□ -1.96
KPNB1-208ENST00000580019 UPK3AO75631 287 aa2.8□□□□□ -1.96
KPNB1-208ENST00000580019 NEBLO76041 1014 aa2.8□□□□□ -1.96
KPNB1-208ENST00000580019 WISP2O76076 250 aa2.8□□□□□ -1.96
KPNB1-208ENST00000580019 GAGE7O76087 117 aa2.8□□□□□ -1.96
KPNB1-208ENST00000580019 STK17BO94768 372 aa2.8□□□□□ -1.96
KPNB1-208ENST00000580019 IFNA2P01563 188 aa2.8□□□□□ -1.96
KPNB1-208ENST00000580019 FTH1P02794 183 aa2.8□□□□□ -1.96
KPNB1-208ENST00000580019 VTNP04004 478 aa2.8□□□□□ -1.96
KPNB1-208ENST00000580019 TFAP2AP05549 437 aa2.8□□□□□ -1.96
KPNB1-208ENST00000580019 CRYGBP07316 175 aa2.8□□□□□ -1.96
KPNB1-208ENST00000580019 GAGE12FP0CL80 117 aa2.8□□□□□ -1.96
KPNB1-208ENST00000580019 GAGE12GP0CL81 117 aa2.8□□□□□ -1.96
KPNB1-208ENST00000580019 GAGE12IP0CL82 117 aa2.8□□□□□ -1.96
KPNB1-208ENST00000580019 STAG3L2P0CL84 134 aa2.8□□□□□ -1.96
KPNB1-208ENST00000580019 GP1BBP13224 206 aa2.8□□□□□ -1.96
KPNB1-208ENST00000580019 TNNI1P19237 187 aa2.8□□□□□ -1.96
KPNB1-208ENST00000580019 PTNP21246 168 aa2.8□□□□□ -1.96
KPNB1-208ENST00000580019 ALDH1B1P30837 517 aa2.8□□□□□ -1.96
KPNB1-208ENST00000580019 CASP14P31944 242 aa2.8□□□□□ -1.96
KPNB1-208ENST00000580019 ATP5C1P36542 298 aaKnown RBP2.8□□□□□ -1.96
KPNB1-208ENST00000580019 FDFT1P37268 417 aa2.8□□□□□ -1.96
KPNB1-208ENST00000580019 PLA2G16P53816 162 aa2.8□□□□□ -1.96
KPNB1-208ENST00000580019 SELENOVP59797 346 aa2.8□□□□□ -1.96
KPNB1-208ENST00000580019 ZP1P60852 638 aa2.8□□□□□ -1.96
KPNB1-208ENST00000580019 PHEXP78562 749 aa2.8□□□□□ -1.96
KPNB1-208ENST00000580019 SRYQ05066 204 aa2.8□□□□□ -1.96
KPNB1-208ENST00000580019 LIPEQ05469 1076 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms