RNA–Protein interactions for RNA: ENST00000578845.2

CDKN2A-212, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 2 BASIC

Gene CDKN2A, Length 678 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-212ENST00000578845 C19orf53Q9UNZ5 99 aaPredicted RBP20.74■□□□□ 0.91
CDKN2A-212ENST00000578845 MTORP42345 2549 aa20.73■□□□□ 0.91
CDKN2A-212ENST00000578845 ZNF469Q96JG9 3925 aaPredicted RBP20.73■□□□□ 0.91
CDKN2A-212ENST00000578845 CYP4B1P13584 511 aa20.73■□□□□ 0.91
CDKN2A-212ENST00000578845 IL12BP29460 328 aa20.73■□□□□ 0.91
CDKN2A-212ENST00000578845 OPRM1P35372 400 aa20.73■□□□□ 0.91
CDKN2A-212ENST00000578845 KRT20P35900 424 aa20.73■□□□□ 0.91
CDKN2A-212ENST00000578845 MRPS22P82650 360 aaKnown RBP20.73■□□□□ 0.91
CDKN2A-212ENST00000578845 FLYWCH1Q4VC44 716 aa20.73■□□□□ 0.91
CDKN2A-212ENST00000578845 IFNEQ86WN2 208 aa20.73■□□□□ 0.91
CDKN2A-212ENST00000578845 SLC44A2Q8IWA5 706 aaPredicted RBP20.73■□□□□ 0.91
CDKN2A-212ENST00000578845 OR2L13Q8N349 312 aa20.73■□□□□ 0.91
CDKN2A-212ENST00000578845 ZFP3Q96NJ6 502 aa20.73■□□□□ 0.91
CDKN2A-212ENST00000578845 TUBA1CQ9BQE3 449 aa20.73■□□□□ 0.91
CDKN2A-212ENST00000578845 MIEF1Q9NQG6 463 aa20.73■□□□□ 0.91
CDKN2A-212ENST00000578845 RRAGDQ9NQL2 400 aaPredicted RBP20.73■□□□□ 0.91
CDKN2A-212ENST00000578845 TAS2R10Q9NYW0 307 aa20.73■□□□□ 0.91
CDKN2A-212ENST00000578845 FBXL2Q9UKC9 423 aa20.73■□□□□ 0.91
CDKN2A-212ENST00000578845 POLR3HQ9Y535 204 aaPredicted RBP20.73■□□□□ 0.91
CDKN2A-212ENST00000578845 B4DXG7 233 aa20.72■□□□□ 0.91
CDKN2A-212ENST00000578845 JUNP05412 331 aaKnown RBP20.72■□□□□ 0.91
CDKN2A-212ENST00000578845 UROSP10746 265 aa20.72■□□□□ 0.91
CDKN2A-212ENST00000578845 CPA3P15088 417 aa20.72■□□□□ 0.91
CDKN2A-212ENST00000578845 DNAJA1P31689 397 aaKnown RBP20.72■□□□□ 0.91
CDKN2A-212ENST00000578845 MC3RP41968 323 aa20.72■□□□□ 0.91
CDKN2A-212ENST00000578845 SLCO1A2P46721 670 aa20.72■□□□□ 0.91
CDKN2A-212ENST00000578845 NCBP2P52298 156 aaKnown RBP eCLIP20.72■□□□□ 0.91
CDKN2A-212ENST00000578845 KIAA0040Q15053 153 aa20.72■□□□□ 0.91
CDKN2A-212ENST00000578845 CYP27C1Q4G0S4 372 aa20.72■□□□□ 0.91
CDKN2A-212ENST00000578845 CFAP157Q5JU67 520 aa20.72■□□□□ 0.91
CDKN2A-212ENST00000578845 NOXRED1Q6NXP6 359 aa20.72■□□□□ 0.91
CDKN2A-212ENST00000578845 RNF165Q6ZSG1 346 aa20.72■□□□□ 0.91
CDKN2A-212ENST00000578845 TRIM42Q8IWZ5 723 aa20.72■□□□□ 0.91
CDKN2A-212ENST00000578845 C9orf106Q8NAJ2 232 aa20.72■□□□□ 0.91
CDKN2A-212ENST00000578845 OR4N2Q8NGD1 307 aa20.72■□□□□ 0.91
CDKN2A-212ENST00000578845 FAM222BQ8WU58 562 aa20.72■□□□□ 0.91
CDKN2A-212ENST00000578845 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.72■□□□□ 0.91
CDKN2A-212ENST00000578845 ZNF764Q96H86 408 aaPredicted RBP20.72■□□□□ 0.91
CDKN2A-212ENST00000578845 G6PC3Q9BUM1 346 aa20.72■□□□□ 0.91
CDKN2A-212ENST00000578845 GLIPR2Q9H4G4 154 aa20.72■□□□□ 0.91
CDKN2A-212ENST00000578845 DNAJB12Q9NXW2 375 aaKnown RBP20.72■□□□□ 0.91
CDKN2A-212ENST00000578845 DOCK7Q96N67 2140 aa20.72■□□□□ 0.91
CDKN2A-212ENST00000578845 CHMP24386 653 aa20.71■□□□□ 0.91
CDKN2A-212ENST00000578845 GRK2P25098 689 aa20.71■□□□□ 0.91
CDKN2A-212ENST00000578845 NTSP30990 170 aa20.71■□□□□ 0.91
CDKN2A-212ENST00000578845 LHX2P50458 406 aa20.71■□□□□ 0.91
CDKN2A-212ENST00000578845 SORDQ00796 357 aa20.71■□□□□ 0.91
CDKN2A-212ENST00000578845 SLC18A2Q05940 514 aa20.71■□□□□ 0.91
CDKN2A-212ENST00000578845 ZNF155Q12901 538 aaPredicted RBP20.71■□□□□ 0.91
CDKN2A-212ENST00000578845 SNTB1Q13884 538 aaKnown RBP20.71■□□□□ 0.91
CDKN2A-212ENST00000578845 LIPMQ5VYY2 423 aa20.71■□□□□ 0.91
CDKN2A-212ENST00000578845 AAGABQ6PD74 315 aa20.71■□□□□ 0.91
CDKN2A-212ENST00000578845 TMEM107Q6UX40 140 aa20.71■□□□□ 0.91
CDKN2A-212ENST00000578845 CDC26Q8NHZ8 85 aa20.71■□□□□ 0.91
CDKN2A-212ENST00000578845 UBLCP1Q8WVY7 318 aaPredicted RBP20.71■□□□□ 0.91
CDKN2A-212ENST00000578845 NINJ1Q92982 152 aa20.71■□□□□ 0.91
CDKN2A-212ENST00000578845 EFHD2Q96C19 240 aaPredicted RBP20.71■□□□□ 0.91
CDKN2A-212ENST00000578845 AMDHD1Q96NU7 426 aa20.71■□□□□ 0.91
CDKN2A-212ENST00000578845 L2HGDHQ9H9P8 463 aa20.71■□□□□ 0.91
CDKN2A-212ENST00000578845 RASSF1Q9NS23 344 aa20.71■□□□□ 0.91
CDKN2A-212ENST00000578845 CLCF1Q9UBD9 225 aa20.71■□□□□ 0.91
CDKN2A-212ENST00000578845 OR10H1Q9Y4A9 318 aa20.71■□□□□ 0.91
CDKN2A-212ENST00000578845 ITPR3Q14573 2671 aa20.7■□□□□ 0.9
CDKN2A-212ENST00000578845 H0Y3Z8 333 aa20.7■□□□□ 0.9
CDKN2A-212ENST00000578845 UPK1AO00322 258 aa20.7■□□□□ 0.9
CDKN2A-212ENST00000578845 COPEO14579 308 aa20.7■□□□□ 0.9
CDKN2A-212ENST00000578845 CRCPO75575 148 aa20.7■□□□□ 0.9
CDKN2A-212ENST00000578845 CD1EP15812 388 aa20.7■□□□□ 0.9
CDKN2A-212ENST00000578845 EVI2BP34910 448 aa20.7■□□□□ 0.9
CDKN2A-212ENST00000578845 FADS6Q8N9I5 356 aa20.7■□□□□ 0.9
CDKN2A-212ENST00000578845 EPS8L3Q8TE67 593 aaKnown RBP20.7■□□□□ 0.9
CDKN2A-212ENST00000578845 WNT2BQ93097 391 aa20.7■□□□□ 0.9
CDKN2A-212ENST00000578845 ELP4Q96EB1 424 aa20.7■□□□□ 0.9
CDKN2A-212ENST00000578845 FCRL1Q96LA6 429 aa20.7■□□□□ 0.9
CDKN2A-212ENST00000578845 TM9SF2Q99805 663 aa20.7■□□□□ 0.9
CDKN2A-212ENST00000578845 SFXN3Q9BWM7 321 aa20.7■□□□□ 0.9
CDKN2A-212ENST00000578845 C12orf65Q9H3J6 166 aaKnown RBP20.7■□□□□ 0.9
CDKN2A-212ENST00000578845 MID2Q9UJV3 735 aa20.7■□□□□ 0.9
CDKN2A-212ENST00000578845 ABCG2Q9UNQ0 655 aa20.7■□□□□ 0.9
CDKN2A-212ENST00000578845 AKAP6Q13023 2319 aa20.69■□□□□ 0.9
CDKN2A-212ENST00000578845 A6NNC1 897 aa20.69■□□□□ 0.9
CDKN2A-212ENST00000578845 FADS1O60427 444 aa20.69■□□□□ 0.9
CDKN2A-212ENST00000578845 ZIC3O60481 467 aa20.69■□□□□ 0.9
CDKN2A-212ENST00000578845 RCBTB2O95199 551 aa20.69■□□□□ 0.9
CDKN2A-212ENST00000578845 TMIGD3P0DMS9 266 aaPredicted RBP20.69■□□□□ 0.9
CDKN2A-212ENST00000578845 ZNF708P17019 499 aa20.69■□□□□ 0.9
CDKN2A-212ENST00000578845 KRT4P19013 534 aa20.69■□□□□ 0.9
CDKN2A-212ENST00000578845 CLDN18P56856 261 aa20.69■□□□□ 0.9
CDKN2A-212ENST00000578845 DAZAP2Q15038 168 aaPredicted RBP20.69■□□□□ 0.9
CDKN2A-212ENST00000578845 KIF18BQ86Y91 864 aa20.69■□□□□ 0.9
CDKN2A-212ENST00000578845 NRGNQ92686 78 aa20.69■□□□□ 0.9
CDKN2A-212ENST00000578845 GPATCH1Q9BRR8 931 aaKnown RBP20.69■□□□□ 0.9
CDKN2A-212ENST00000578845 LMF2Q9BU23 707 aaKnown RBP20.69■□□□□ 0.9
CDKN2A-212ENST00000578845 TRMOQ9BU70 441 aa20.69■□□□□ 0.9
CDKN2A-212ENST00000578845 POLDIP3Q9BY77 421 aaKnown RBP20.69■□□□□ 0.9
CDKN2A-212ENST00000578845 DDX18Q9NVP1 670 aaKnown RBP20.69■□□□□ 0.9
CDKN2A-212ENST00000578845 MKS1Q9NXB0 559 aa20.69■□□□□ 0.9
CDKN2A-212ENST00000578845 CBLCQ9ULV8 474 aa20.69■□□□□ 0.9
CDKN2A-212ENST00000578845 VPS13CQ709C8 3753 aa20.69■□□□□ 0.9
CDKN2A-212ENST00000578845 C2CD3Q4AC94 2353 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms