RNA–Protein interactions for RNA: ENST00000577686.1

SMARCD2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 394 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-205ENST00000577686 SOX18P35713 384 aa12.86□□□□□ -0.35
SMARCD2-205ENST00000577686 PSMD4P55036 377 aaKnown RBP12.86□□□□□ -0.35
SMARCD2-205ENST00000577686 CLDN18P56856 261 aa12.86□□□□□ -0.35
SMARCD2-205ENST00000577686 MRPS35P82673 323 aaKnown RBP12.86□□□□□ -0.35
SMARCD2-205ENST00000577686 GUCY2DQ02846 1103 aa12.86□□□□□ -0.35
SMARCD2-205ENST00000577686 GALNT1Q10472 559 aaPredicted RBP12.86□□□□□ -0.35
SMARCD2-205ENST00000577686 RASA2Q15283 850 aa12.86□□□□□ -0.35
SMARCD2-205ENST00000577686 SPIN4Q56A73 249 aa12.86□□□□□ -0.35
SMARCD2-205ENST00000577686 YTHDF3Q7Z739 585 aaKnown RBP12.86□□□□□ -0.35
SMARCD2-205ENST00000577686 C1orf52Q8N6N3 182 aaKnown RBP12.86□□□□□ -0.35
SMARCD2-205ENST00000577686 Q96MF0 132 aa12.86□□□□□ -0.35
SMARCD2-205ENST00000577686 SMR3AQ99954 134 aa12.86□□□□□ -0.35
SMARCD2-205ENST00000577686 KLHL28Q9NXS3 571 aa12.86□□□□□ -0.35
SMARCD2-205ENST00000577686 C6orf203Q9P0P8 240 aaPredicted RBP12.86□□□□□ -0.35
SMARCD2-205ENST00000577686 ABCG2Q9UNQ0 655 aa12.86□□□□□ -0.35
SMARCD2-205ENST00000577686 H7C1Q1 480 aa12.85□□□□□ -0.35
SMARCD2-205ENST00000577686 EMC8O43402 210 aa12.85□□□□□ -0.35
SMARCD2-205ENST00000577686 HK1P19367 917 aa12.85□□□□□ -0.35
SMARCD2-205ENST00000577686 HMOX2P30519 316 aa12.85□□□□□ -0.35
SMARCD2-205ENST00000577686 OCRLQ01968 901 aa12.85□□□□□ -0.35
SMARCD2-205ENST00000577686 CKAP4Q07065 602 aaKnown RBP12.85□□□□□ -0.35
SMARCD2-205ENST00000577686 ACSM2AQ08AH3 577 aa12.85□□□□□ -0.35
SMARCD2-205ENST00000577686 ZNF155Q12901 538 aaPredicted RBP12.85□□□□□ -0.35
SMARCD2-205ENST00000577686 ZNHIT3Q15649 155 aaPredicted RBP12.85□□□□□ -0.35
SMARCD2-205ENST00000577686 LTB4RQ15722 352 aa12.85□□□□□ -0.35
SMARCD2-205ENST00000577686 ZNF628Q5EBL2 1059 aa12.85□□□□□ -0.35
SMARCD2-205ENST00000577686 ACSM2BQ68CK6 577 aa12.85□□□□□ -0.35
SMARCD2-205ENST00000577686 C8orf74Q6P047 294 aa12.85□□□□□ -0.35
SMARCD2-205ENST00000577686 ZDHHC24Q6UX98 284 aa12.85□□□□□ -0.35
SMARCD2-205ENST00000577686 KRTAP1-3Q8IUG1 177 aa12.85□□□□□ -0.35
SMARCD2-205ENST00000577686 SLC44A2Q8IWA5 706 aaPredicted RBP12.85□□□□□ -0.35
SMARCD2-205ENST00000577686 UBQLNLQ8IYU4 475 aa12.85□□□□□ -0.35
SMARCD2-205ENST00000577686 ZNF483Q8TF39 744 aaPredicted RBP12.85□□□□□ -0.35
SMARCD2-205ENST00000577686 MTBPQ96DY7 904 aa12.85□□□□□ -0.35
SMARCD2-205ENST00000577686 ARSGQ96EG1 525 aa12.85□□□□□ -0.35
SMARCD2-205ENST00000577686 CNRIP1Q96F85 164 aaPredicted RBP12.85□□□□□ -0.35
SMARCD2-205ENST00000577686 ZNF681Q96N22 645 aa12.85□□□□□ -0.35
SMARCD2-205ENST00000577686 NSUN5Q96P11 429 aaKnown RBP12.85□□□□□ -0.35
SMARCD2-205ENST00000577686 BBS4Q96RK4 519 aa12.85□□□□□ -0.35
SMARCD2-205ENST00000577686 PIGQQ9BRB3 760 aa12.85□□□□□ -0.35
SMARCD2-205ENST00000577686 G6PC3Q9BUM1 346 aa12.85□□□□□ -0.35
SMARCD2-205ENST00000577686 FOLH1BQ9HBA9 442 aa12.85□□□□□ -0.35
SMARCD2-205ENST00000577686 ZBTB26Q9HCK0 441 aa12.85□□□□□ -0.35
SMARCD2-205ENST00000577686 FBXL2Q9UKC9 423 aa12.85□□□□□ -0.35
SMARCD2-205ENST00000577686 PROCRQ9UNN8 238 aa12.85□□□□□ -0.35
SMARCD2-205ENST00000577686 ACANP16112 2415 aa12.85□□□□□ -0.35
SMARCD2-205ENST00000577686 HMX2A2RU54 273 aa12.84□□□□□ -0.35
SMARCD2-205ENST00000577686 SCO2O43819 266 aa12.84□□□□□ -0.35
SMARCD2-205ENST00000577686 PCDH7O60245 1069 aa12.84□□□□□ -0.35
SMARCD2-205ENST00000577686 TSPAN2O60636 221 aa12.84□□□□□ -0.35
SMARCD2-205ENST00000577686 ULK1O75385 1050 aa12.84□□□□□ -0.35
SMARCD2-205ENST00000577686 TNFRSF21O75509 655 aa12.84□□□□□ -0.35
SMARCD2-205ENST00000577686 LY6G6DO95868 133 aa12.84□□□□□ -0.35
SMARCD2-205ENST00000577686 TGM6O95932 706 aa12.84□□□□□ -0.35
SMARCD2-205ENST00000577686 CD8BP10966 210 aa12.84□□□□□ -0.35
SMARCD2-205ENST00000577686 TCEA1P23193 301 aaKnown RBP12.84□□□□□ -0.35
SMARCD2-205ENST00000577686 EVI2BP34910 448 aa12.84□□□□□ -0.35
SMARCD2-205ENST00000577686 UGT2B10P36537 528 aa12.84□□□□□ -0.35
SMARCD2-205ENST00000577686 SIRPAP78324 504 aa12.84□□□□□ -0.35
SMARCD2-205ENST00000577686 FAM27E3Q08E93 113 aa12.84□□□□□ -0.35
SMARCD2-205ENST00000577686 CYP27C1Q4G0S4 372 aa12.84□□□□□ -0.35
SMARCD2-205ENST00000577686 LGSNQ5TDP6 509 aa12.84□□□□□ -0.35
SMARCD2-205ENST00000577686 DESI1Q6ICB0 168 aa12.84□□□□□ -0.35
SMARCD2-205ENST00000577686 CCDC116Q8IYX3 515 aa12.84□□□□□ -0.35
SMARCD2-205ENST00000577686 EXOSC8Q96B26 276 aaKnown RBP12.84□□□□□ -0.35
SMARCD2-205ENST00000577686 STARD4Q96DR4 205 aa12.84□□□□□ -0.35
SMARCD2-205ENST00000577686 VSTM2LQ96N03 204 aa12.84□□□□□ -0.35
SMARCD2-205ENST00000577686 WFIKKN1Q96NZ8 548 aa12.84□□□□□ -0.35
SMARCD2-205ENST00000577686 C3orf14Q9HBI5 128 aa12.84□□□□□ -0.35
SMARCD2-205ENST00000577686 FARSBQ9NSD9 589 aaKnown RBP12.84□□□□□ -0.35
SMARCD2-205ENST00000577686 EMC9Q9Y3B6 208 aa12.84□□□□□ -0.35
SMARCD2-205ENST00000577686 DEFB108AA8MXU0 73 aa12.83□□□□□ -0.36
SMARCD2-205ENST00000577686 SEC14L5O43304 696 aa12.83□□□□□ -0.36
SMARCD2-205ENST00000577686 PLOD3O60568 738 aa12.83□□□□□ -0.36
SMARCD2-205ENST00000577686 PLGP00747 810 aaPredicted RBP12.83□□□□□ -0.36
SMARCD2-205ENST00000577686 IL3P08700 152 aa12.83□□□□□ -0.36
SMARCD2-205ENST00000577686 CT45A8P0DMV1 189 aa12.83□□□□□ -0.36
SMARCD2-205ENST00000577686 CT45A9P0DMV2 189 aa12.83□□□□□ -0.36
SMARCD2-205ENST00000577686 MAGEA12P43365 314 aa12.83□□□□□ -0.36
SMARCD2-205ENST00000577686 NR1H2P55055 460 aa12.83□□□□□ -0.36
SMARCD2-205ENST00000577686 CORO7P57737 925 aa12.83□□□□□ -0.36
SMARCD2-205ENST00000577686 SGCBQ16585 318 aa12.83□□□□□ -0.36
SMARCD2-205ENST00000577686 DECR1Q16698 335 aa12.83□□□□□ -0.36
SMARCD2-205ENST00000577686 GLYR1Q49A26 553 aaPredicted RBP12.83□□□□□ -0.36
SMARCD2-205ENST00000577686 CT45A2Q5DJT8 189 aa12.83□□□□□ -0.36
SMARCD2-205ENST00000577686 BEX5Q5H9J7 111 aa12.83□□□□□ -0.36
SMARCD2-205ENST00000577686 OR5M10Q6IEU7 315 aa12.83□□□□□ -0.36
SMARCD2-205ENST00000577686 LETMD1Q6P1Q0 360 aa12.83□□□□□ -0.36
SMARCD2-205ENST00000577686 VWA1Q6PCB0 445 aa12.83□□□□□ -0.36
SMARCD2-205ENST00000577686 PLEKHM3Q6ZWE6 761 aa12.83□□□□□ -0.36
SMARCD2-205ENST00000577686 CNPY4Q8N129 248 aa12.83□□□□□ -0.36
SMARCD2-205ENST00000577686 PLD6Q8N2A8 252 aaKnown RBP12.83□□□□□ -0.36
SMARCD2-205ENST00000577686 LRRN4CLQ8ND94 238 aa12.83□□□□□ -0.36
SMARCD2-205ENST00000577686 OR9A2Q8NGT5 310 aa12.83□□□□□ -0.36
SMARCD2-205ENST00000577686 TMEM171Q8WVE6 324 aa12.83□□□□□ -0.36
SMARCD2-205ENST00000577686 KAT2AQ92830 837 aa12.83□□□□□ -0.36
SMARCD2-205ENST00000577686 EFHD2Q96C19 240 aaPredicted RBP12.83□□□□□ -0.36
SMARCD2-205ENST00000577686 PERPQ96FX8 193 aa12.83□□□□□ -0.36
SMARCD2-205ENST00000577686 C1QTNF3Q9BXJ4 246 aa12.83□□□□□ -0.36
SMARCD2-205ENST00000577686 PINK1Q9BXM7 581 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms