RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 B3GALT5-AS1P59052 145 aa12.02□□□□□ -0.49
COPS3-214ENST00000577246 IFT88Q13099 833 aa12.02□□□□□ -0.49
COPS3-214ENST00000577246 CAPRIN1Q14444 709 aaKnown RBP12.02□□□□□ -0.49
COPS3-214ENST00000577246 ERCC6LQ2NKX8 1250 aa12.02□□□□□ -0.49
COPS3-214ENST00000577246 CHRFAM7AQ494W8 412 aa12.02□□□□□ -0.49
COPS3-214ENST00000577246 FRG2Q64ET8 278 aa12.02□□□□□ -0.49
COPS3-214ENST00000577246 KLC3Q6P597 504 aa12.02□□□□□ -0.49
COPS3-214ENST00000577246 LARP4Q71RC2 724 aaKnown RBP eCLIP12.02□□□□□ -0.49
COPS3-214ENST00000577246 GOLGA7Q7Z5G4 137 aa12.02□□□□□ -0.49
COPS3-214ENST00000577246 CMC1Q7Z7K0 106 aa12.02□□□□□ -0.49
COPS3-214ENST00000577246 GAS2L3Q86XJ1 694 aa12.02□□□□□ -0.49
COPS3-214ENST00000577246 SAMD14Q8IZD0 417 aaPredicted RBP12.02□□□□□ -0.49
COPS3-214ENST00000577246 SLC35F6Q8N357 371 aa12.02□□□□□ -0.49
COPS3-214ENST00000577246 OR6K3Q8NGY3 331 aa12.02□□□□□ -0.49
COPS3-214ENST00000577246 FNDC9Q8TBE3 224 aa12.02□□□□□ -0.49
COPS3-214ENST00000577246 GTPBP3Q969Y2 492 aaKnown RBP12.02□□□□□ -0.49
COPS3-214ENST00000577246 PLPPR2Q96GM1 343 aa12.02□□□□□ -0.49
COPS3-214ENST00000577246 FRG2BQ96QU4 278 aa12.02□□□□□ -0.49
COPS3-214ENST00000577246 MRPL1Q9BYD6 325 aaKnown RBP12.02□□□□□ -0.49
COPS3-214ENST00000577246 OR10A4Q9H209 315 aa12.02□□□□□ -0.49
COPS3-214ENST00000577246 CES1P1Q9UKY3 287 aa12.02□□□□□ -0.49
COPS3-214ENST00000577246 LAMP3Q9UQV4 416 aa12.02□□□□□ -0.49
COPS3-214ENST00000577246 FREM3P0C091 2139 aa12.02□□□□□ -0.49
COPS3-214ENST00000577246 TSPAN2O60636 221 aa12.01□□□□□ -0.49
COPS3-214ENST00000577246 THBDP07204 575 aa12.01□□□□□ -0.49
COPS3-214ENST00000577246 PCSK2P16519 638 aa12.01□□□□□ -0.49
COPS3-214ENST00000577246 HK1P19367 917 aa12.01□□□□□ -0.49
COPS3-214ENST00000577246 CCNG1P51959 295 aa12.01□□□□□ -0.49
COPS3-214ENST00000577246 CTBP2P56545 445 aa12.01□□□□□ -0.49
COPS3-214ENST00000577246 DLG1Q12959 904 aa12.01□□□□□ -0.49
COPS3-214ENST00000577246 ACAP2Q15057 778 aa12.01□□□□□ -0.49
COPS3-214ENST00000577246 GUSBP1Q15486 140 aa12.01□□□□□ -0.49
COPS3-214ENST00000577246 SGCBQ16585 318 aa12.01□□□□□ -0.49
COPS3-214ENST00000577246 TRMT12Q53H54 448 aaKnown RBP12.01□□□□□ -0.49
COPS3-214ENST00000577246 BEND4Q6ZU67 534 aa12.01□□□□□ -0.49
COPS3-214ENST00000577246 C3orf62Q6ZUJ4 267 aa12.01□□□□□ -0.49
COPS3-214ENST00000577246 STK32CQ86UX6 486 aa12.01□□□□□ -0.49
COPS3-214ENST00000577246 METTL4Q8N3J2 472 aa12.01□□□□□ -0.49
COPS3-214ENST00000577246 METTL25Q8N6Q8 603 aa12.01□□□□□ -0.49
COPS3-214ENST00000577246 ZNF675Q8TD23 568 aa12.01□□□□□ -0.49
COPS3-214ENST00000577246 AKAP1Q92667 903 aaKnown RBP eCLIP12.01□□□□□ -0.49
COPS3-214ENST00000577246 NXNL1Q96CM4 212 aa12.01□□□□□ -0.49
COPS3-214ENST00000577246 TACO1Q9BSH4 297 aaKnown RBP12.01□□□□□ -0.49
COPS3-214ENST00000577246 TMEM204Q9BSN7 226 aa12.01□□□□□ -0.49
COPS3-214ENST00000577246 PRRG4Q9BZD6 226 aa12.01□□□□□ -0.49
COPS3-214ENST00000577246 SAYSD1Q9NPB0 183 aa12.01□□□□□ -0.49
COPS3-214ENST00000577246 PFDN4Q9NQP4 134 aa12.01□□□□□ -0.49
COPS3-214ENST00000577246 YAE1D1Q9NRH1 226 aa12.01□□□□□ -0.49
COPS3-214ENST00000577246 PLSCR4Q9NRQ2 329 aa12.01□□□□□ -0.49
COPS3-214ENST00000577246 NMRK1Q9NWW6 199 aa12.01□□□□□ -0.49
COPS3-214ENST00000577246 SNX8Q9Y5X2 465 aa12.01□□□□□ -0.49
COPS3-214ENST00000577246 ZANQ9Y493 2812 aa12.01□□□□□ -0.49
COPS3-214ENST00000577246 CHD3Q12873 2000 aaKnown RBP12□□□□□ -0.49
COPS3-214ENST00000577246 H3BML4 177 aa12□□□□□ -0.49
COPS3-214ENST00000577246 CCDC188H7C350 402 aa12□□□□□ -0.49
COPS3-214ENST00000577246 TP73O15350 636 aa12□□□□□ -0.49
COPS3-214ENST00000577246 FESP07332 822 aa12□□□□□ -0.49
COPS3-214ENST00000577246 EVI2BP34910 448 aa12□□□□□ -0.49
COPS3-214ENST00000577246 CLK3P49761 638 aaKnown RBP12□□□□□ -0.49
COPS3-214ENST00000577246 GAS1P54826 345 aa12□□□□□ -0.49
COPS3-214ENST00000577246 TRA2BP62995 288 aaKnown RBP12□□□□□ -0.49
COPS3-214ENST00000577246 CALCOCO2Q13137 446 aa12□□□□□ -0.49
COPS3-214ENST00000577246 NAB1Q13506 487 aa12□□□□□ -0.49
COPS3-214ENST00000577246 GLYR1Q49A26 553 aaPredicted RBP12□□□□□ -0.49
COPS3-214ENST00000577246 ADAM5Q6NVV9 412 aa12□□□□□ -0.49
COPS3-214ENST00000577246 STAC2Q6ZMT1 411 aa12□□□□□ -0.49
COPS3-214ENST00000577246 COMMD6Q7Z4G1 85 aa12□□□□□ -0.49
COPS3-214ENST00000577246 WFDC8Q8IUA0 241 aa12□□□□□ -0.49
COPS3-214ENST00000577246 FADS6Q8N9I5 356 aa12□□□□□ -0.49
COPS3-214ENST00000577246 MAPK1IP1LQ8NDC0 245 aa12□□□□□ -0.49
COPS3-214ENST00000577246 RNF138Q8WVD3 245 aa12□□□□□ -0.49
COPS3-214ENST00000577246 FBXW5Q969U6 566 aa12□□□□□ -0.49
COPS3-214ENST00000577246 ZBED6CLQ96FA7 236 aaPredicted RBP12□□□□□ -0.49
COPS3-214ENST00000577246 GMPPAQ96IJ6 420 aaPredicted RBP12□□□□□ -0.49
COPS3-214ENST00000577246 ACTR6Q9GZN1 396 aa12□□□□□ -0.49
COPS3-214ENST00000577246 DSN1Q9H410 356 aa12□□□□□ -0.49
COPS3-214ENST00000577246 ELOVL6Q9H5J4 265 aa12□□□□□ -0.49
COPS3-214ENST00000577246 NOL11Q9H8H0 719 aaKnown RBP12□□□□□ -0.49
COPS3-214ENST00000577246 BARX1Q9HBU1 254 aaPredicted RBP12□□□□□ -0.49
COPS3-214ENST00000577246 NGBQ9NPG2 151 aa12□□□□□ -0.49
COPS3-214ENST00000577246 GLRX2Q9NS18 164 aa12□□□□□ -0.49
COPS3-214ENST00000577246 PAQR5Q9NXK6 330 aaPredicted RBP12□□□□□ -0.49
COPS3-214ENST00000577246 ABCG2Q9UNQ0 655 aa12□□□□□ -0.49
COPS3-214ENST00000577246 SLC12A4Q9UP95 1085 aa12□□□□□ -0.49
COPS3-214ENST00000577246 GPR52Q9Y2T5 361 aa12□□□□□ -0.49
COPS3-214ENST00000577246 ZNF337Q9Y3M9 751 aa12□□□□□ -0.49
COPS3-214ENST00000577246 OR10H1Q9Y4A9 318 aa12□□□□□ -0.49
COPS3-214ENST00000577246 AP4B1Q9Y6B7 739 aa12□□□□□ -0.49
COPS3-214ENST00000577246 MXRA5Q9NR99 2828 aa12□□□□□ -0.49
COPS3-214ENST00000577246 RAI1Q7Z5J4 1906 aaPredicted RBP11.99□□□□□ -0.49
COPS3-214ENST00000577246 A8MV72 311 aaPredicted RBP11.99□□□□□ -0.49
COPS3-214ENST00000577246 OVOL3O00110 214 aa11.99□□□□□ -0.49
COPS3-214ENST00000577246 CT45A8P0DMV1 189 aa11.99□□□□□ -0.49
COPS3-214ENST00000577246 CT45A9P0DMV2 189 aa11.99□□□□□ -0.49
COPS3-214ENST00000577246 STX2P32856 288 aa11.99□□□□□ -0.49
COPS3-214ENST00000577246 ALDH9A1P49189 494 aa11.99□□□□□ -0.49
COPS3-214ENST00000577246 SUCLG1P53597 346 aaKnown RBP11.99□□□□□ -0.49
COPS3-214ENST00000577246 CLDN15P56746 228 aa11.99□□□□□ -0.49
COPS3-214ENST00000577246 MRPS35P82673 323 aaKnown RBP11.99□□□□□ -0.49
COPS3-214ENST00000577246 LTB4RQ15722 352 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms