RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 ABCB7O75027 752 aa9.07□□□□□ -0.96
NPLOC4-220ENST00000576940 ATP1B1P05026 303 aa9.07□□□□□ -0.96
NPLOC4-220ENST00000576940 DANCRP0C864 163 aa9.07□□□□□ -0.96
NPLOC4-220ENST00000576940 CTAGE8P0CG41 777 aa9.07□□□□□ -0.96
NPLOC4-220ENST00000576940 CT45A8P0DMV1 189 aa9.07□□□□□ -0.96
NPLOC4-220ENST00000576940 CT45A9P0DMV2 189 aa9.07□□□□□ -0.96
NPLOC4-220ENST00000576940 PPP3CBP16298 524 aa9.07□□□□□ -0.96
NPLOC4-220ENST00000576940 PCSK2P16519 638 aa9.07□□□□□ -0.96
NPLOC4-220ENST00000576940 CSNK2A2P19784 350 aaPredicted RBP9.07□□□□□ -0.96
NPLOC4-220ENST00000576940 SLC6A8P48029 635 aa9.07□□□□□ -0.96
NPLOC4-220ENST00000576940 CORO7P57737 925 aa9.07□□□□□ -0.96
NPLOC4-220ENST00000576940 SRSF2Q01130 221 aaKnown RBP9.07□□□□□ -0.96
NPLOC4-220ENST00000576940 GTF2H2Q13888 395 aa9.07□□□□□ -0.96
NPLOC4-220ENST00000576940 SGCBQ16585 318 aa9.07□□□□□ -0.96
NPLOC4-220ENST00000576940 PFKFB4Q16877 469 aa9.07□□□□□ -0.96
NPLOC4-220ENST00000576940 CT45A2Q5DJT8 189 aa9.07□□□□□ -0.96
NPLOC4-220ENST00000576940 RAET1LQ5VY80 246 aa9.07□□□□□ -0.96
NPLOC4-220ENST00000576940 PPP4R4Q6NUP7 873 aa9.07□□□□□ -0.96
NPLOC4-220ENST00000576940 SLC48A1Q6P1K1 146 aa9.07□□□□□ -0.96
NPLOC4-220ENST00000576940 GTF2H2CQ6P1K8 395 aa9.07□□□□□ -0.96
NPLOC4-220ENST00000576940 GOLGA7Q7Z5G4 137 aa9.07□□□□□ -0.96
NPLOC4-220ENST00000576940 CTAGE4Q8IX94 777 aa9.07□□□□□ -0.96
NPLOC4-220ENST00000576940 KLHL7Q8IXQ5 586 aa9.07□□□□□ -0.96
NPLOC4-220ENST00000576940 CCDC116Q8IYX3 515 aa9.07□□□□□ -0.96
NPLOC4-220ENST00000576940 OR2M3Q8NG83 312 aa9.07□□□□□ -0.96
NPLOC4-220ENST00000576940 OR4K17Q8NGC6 315 aa9.07□□□□□ -0.96
NPLOC4-220ENST00000576940 GTPBP3Q969Y2 492 aaKnown RBP9.07□□□□□ -0.96
NPLOC4-220ENST00000576940 EFHD2Q96C19 240 aaPredicted RBP9.07□□□□□ -0.96
NPLOC4-220ENST00000576940 TM4SF18Q96CE8 201 aa9.07□□□□□ -0.96
NPLOC4-220ENST00000576940 SLC35A4Q96G79 324 aa9.07□□□□□ -0.96
NPLOC4-220ENST00000576940 SERPINI1Q99574 410 aa9.07□□□□□ -0.96
NPLOC4-220ENST00000576940 NTMT1Q9BV86 223 aa9.07□□□□□ -0.96
NPLOC4-220ENST00000576940 MRPL1Q9BYD6 325 aaKnown RBP9.07□□□□□ -0.96
NPLOC4-220ENST00000576940 ACTR6Q9GZN1 396 aa9.07□□□□□ -0.96
NPLOC4-220ENST00000576940 NMRAL1Q9HBL8 299 aa9.07□□□□□ -0.96
NPLOC4-220ENST00000576940 TXNDC16Q9P2K2 825 aa9.07□□□□□ -0.96
NPLOC4-220ENST00000576940 PRODH2Q9UF12 536 aa9.07□□□□□ -0.96
NPLOC4-220ENST00000576940 GDF2Q9UK05 429 aaPredicted RBP9.07□□□□□ -0.96
NPLOC4-220ENST00000576940 LIPT1Q9Y234 373 aa9.07□□□□□ -0.96
NPLOC4-220ENST00000576940 MAGED1Q9Y5V3 778 aaPredicted RBP9.07□□□□□ -0.96
NPLOC4-220ENST00000576940 C1orf226A1L170 272 aa9.06□□□□□ -0.96
NPLOC4-220ENST00000576940 OR2M5A3KFT3 312 aa9.06□□□□□ -0.96
NPLOC4-220ENST00000576940 GOLGA6L10A6NI86 522 aa9.06□□□□□ -0.96
NPLOC4-220ENST00000576940 SHISA8B8ZZ34 492 aa9.06□□□□□ -0.96
NPLOC4-220ENST00000576940 HAX1O00165 279 aa9.06□□□□□ -0.96
NPLOC4-220ENST00000576940 CLOCKO15516 846 aa9.06□□□□□ -0.96
NPLOC4-220ENST00000576940 SCO2O43819 266 aa9.06□□□□□ -0.96
NPLOC4-220ENST00000576940 SEC31AO94979 1220 aaKnown RBP9.06□□□□□ -0.96
NPLOC4-220ENST00000576940 SIX3O95343 332 aaPredicted RBP9.06□□□□□ -0.96
NPLOC4-220ENST00000576940 IGHV4-39P01824 125 aa9.06□□□□□ -0.96
NPLOC4-220ENST00000576940 LTA4HP09960 611 aaKnown RBP9.06□□□□□ -0.96
NPLOC4-220ENST00000576940 FAM157CP0CG43 387 aa9.06□□□□□ -0.96
NPLOC4-220ENST00000576940 GP5P40197 560 aa9.06□□□□□ -0.96
NPLOC4-220ENST00000576940 MAPK12P53778 367 aa9.06□□□□□ -0.96
NPLOC4-220ENST00000576940 FGFBP1Q14512 234 aa9.06□□□□□ -0.96
NPLOC4-220ENST00000576940 TSC22D1Q15714 1073 aa9.06□□□□□ -0.96
NPLOC4-220ENST00000576940 SGO1Q5FBB7 561 aa9.06□□□□□ -0.96
NPLOC4-220ENST00000576940 FAM219BQ5XKK7 198 aa9.06□□□□□ -0.96
NPLOC4-220ENST00000576940 NPSR1Q6W5P4 371 aa9.06□□□□□ -0.96
NPLOC4-220ENST00000576940 DNM1P46Q6ZS02 220 aa9.06□□□□□ -0.96
NPLOC4-220ENST00000576940 LARP4Q71RC2 724 aaKnown RBP eCLIP9.06□□□□□ -0.96
NPLOC4-220ENST00000576940 SLC35F6Q8N357 371 aa9.06□□□□□ -0.96
NPLOC4-220ENST00000576940 FADS6Q8N9I5 356 aa9.06□□□□□ -0.96
NPLOC4-220ENST00000576940 L3MBTL4Q8NA19 623 aa9.06□□□□□ -0.96
NPLOC4-220ENST00000576940 PYROXD1Q8WU10 500 aa9.06□□□□□ -0.96
NPLOC4-220ENST00000576940 SMAP2Q8WU79 429 aaPredicted RBP9.06□□□□□ -0.96
NPLOC4-220ENST00000576940 CDKL2Q92772 493 aa9.06□□□□□ -0.96
NPLOC4-220ENST00000576940 KAT2AQ92830 837 aa9.06□□□□□ -0.96
NPLOC4-220ENST00000576940 KLHL29Q96CT2 875 aa9.06□□□□□ -0.96
NPLOC4-220ENST00000576940 CNRIP1Q96F85 164 aaPredicted RBP9.06□□□□□ -0.96
NPLOC4-220ENST00000576940 ZNF681Q96N22 645 aa9.06□□□□□ -0.96
NPLOC4-220ENST00000576940 CPNE1Q99829 537 aa9.06□□□□□ -0.96
NPLOC4-220ENST00000576940 LRRC1Q9BTT6 524 aa9.06□□□□□ -0.96
NPLOC4-220ENST00000576940 PRRG4Q9BZD6 226 aa9.06□□□□□ -0.96
NPLOC4-220ENST00000576940 RTN4RQ9BZR6 473 aa9.06□□□□□ -0.96
NPLOC4-220ENST00000576940 NOL11Q9H8H0 719 aaKnown RBP9.06□□□□□ -0.96
NPLOC4-220ENST00000576940 FOLH1BQ9HBA9 442 aa9.06□□□□□ -0.96
NPLOC4-220ENST00000576940 AHSPQ9NZD4 102 aa9.06□□□□□ -0.96
NPLOC4-220ENST00000576940 FLRT3Q9NZU0 649 aa9.06□□□□□ -0.96
NPLOC4-220ENST00000576940 PPP4R1LQ9P1A2 415 aa9.06□□□□□ -0.96
NPLOC4-220ENST00000576940 SNX24Q9Y343 169 aa9.06□□□□□ -0.96
NPLOC4-220ENST00000576940 ZNF175Q9Y473 711 aa9.06□□□□□ -0.96
NPLOC4-220ENST00000576940 UQCRHLA0A096LP55 91 aa9.05□□□□□ -0.96
NPLOC4-220ENST00000576940 OR7A17O14581 309 aa9.05□□□□□ -0.96
NPLOC4-220ENST00000576940 UGDHO60701 494 aa9.05□□□□□ -0.96
NPLOC4-220ENST00000576940 SEMA3DO95025 777 aa9.05□□□□□ -0.96
NPLOC4-220ENST00000576940 CLDN9O95484 217 aa9.05□□□□□ -0.96
NPLOC4-220ENST00000576940 NTN1O95631 604 aa9.05□□□□□ -0.96
NPLOC4-220ENST00000576940 OPN1LWP04000 364 aa9.05□□□□□ -0.96
NPLOC4-220ENST00000576940 GFAPP14136 432 aa9.05□□□□□ -0.96
NPLOC4-220ENST00000576940 IL11P20809 199 aa9.05□□□□□ -0.96
NPLOC4-220ENST00000576940 PTNP21246 168 aa9.05□□□□□ -0.96
NPLOC4-220ENST00000576940 IL12BP29460 328 aa9.05□□□□□ -0.96
NPLOC4-220ENST00000576940 SPRP35270 261 aaPredicted RBP9.05□□□□□ -0.96
NPLOC4-220ENST00000576940 ARL1P40616 181 aaPredicted RBP9.05□□□□□ -0.96
NPLOC4-220ENST00000576940 ALDH9A1P49189 494 aa9.05□□□□□ -0.96
NPLOC4-220ENST00000576940 PNLIPRP2P54317 469 aa9.05□□□□□ -0.96
NPLOC4-220ENST00000576940 RPS3AP61247 264 aaKnown RBP9.05□□□□□ -0.96
NPLOC4-220ENST00000576940 IRF9Q00978 393 aa9.05□□□□□ -0.96
NPLOC4-220ENST00000576940 DR1Q01658 176 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms