RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 PAQR8Q8TEZ7 354 aa5.7□□□□□ -1.5
NUP88-212ENST00000576708 TANKQ92844 425 aa5.7□□□□□ -1.5
NUP88-212ENST00000576708 RIT1Q92963 219 aa5.7□□□□□ -1.5
NUP88-212ENST00000576708 SPACA9Q96E40 222 aaPredicted RBP5.7□□□□□ -1.5
NUP88-212ENST00000576708 FBXL20Q96IG2 436 aa5.7□□□□□ -1.5
NUP88-212ENST00000576708 SGCZQ96LD1 299 aa5.7□□□□□ -1.5
NUP88-212ENST00000576708 BTBD2Q9BX70 525 aa5.7□□□□□ -1.5
NUP88-212ENST00000576708 WWTR1Q9GZV5 400 aa5.7□□□□□ -1.5
NUP88-212ENST00000576708 OR10A5Q9H207 317 aa5.7□□□□□ -1.5
NUP88-212ENST00000576708 VPS11Q9H270 941 aa5.7□□□□□ -1.5
NUP88-212ENST00000576708 LIME1Q9H400 295 aa5.7□□□□□ -1.5
NUP88-212ENST00000576708 ZNF703Q9H7S9 590 aaPredicted RBP5.7□□□□□ -1.5
NUP88-212ENST00000576708 ACTR8Q9H981 624 aa5.7□□□□□ -1.5
NUP88-212ENST00000576708 SNX15Q9NRS6 342 aa5.7□□□□□ -1.5
NUP88-212ENST00000576708 TEX10Q9NXF1 929 aaPredicted RBP5.7□□□□□ -1.5
NUP88-212ENST00000576708 CPSF2Q9P2I0 782 aaKnown RBP5.7□□□□□ -1.5
NUP88-212ENST00000576708 PHF11Q9UIL8 331 aa5.7□□□□□ -1.5
NUP88-212ENST00000576708 MAGEL2Q9UJ55 1249 aa5.7□□□□□ -1.5
NUP88-212ENST00000576708 CHCHD2Q9Y6H1 151 aaPredicted RBP5.7□□□□□ -1.5
NUP88-212ENST00000576708 NCKAP5O14513 1909 aa5.7□□□□□ -1.5
NUP88-212ENST00000576708 ZNF407Q9C0G0 2248 aa5.69□□□□□ -1.5
NUP88-212ENST00000576708 CELSR1Q9NYQ6 3014 aa5.69□□□□□ -1.5
NUP88-212ENST00000576708 A0A087X1B8 175 aa5.69□□□□□ -1.5
NUP88-212ENST00000576708 SYNDIG1LA6NDD5 238 aa5.69□□□□□ -1.5
NUP88-212ENST00000576708 H0YIV9 168 aa5.69□□□□□ -1.5
NUP88-212ENST00000576708 OR7A17O14581 309 aa5.69□□□□□ -1.5
NUP88-212ENST00000576708 HCN1O60741 890 aa5.69□□□□□ -1.5
NUP88-212ENST00000576708 TRIM13O60858 407 aa5.69□□□□□ -1.5
NUP88-212ENST00000576708 CYP7B1O75881 506 aa5.69□□□□□ -1.5
NUP88-212ENST00000576708 ACSL3O95573 720 aa5.69□□□□□ -1.5
NUP88-212ENST00000576708 KLK1P06870 262 aa5.69□□□□□ -1.5
NUP88-212ENST00000576708 NR2F6P10588 404 aa5.69□□□□□ -1.5
NUP88-212ENST00000576708 CPEP16870 476 aa5.69□□□□□ -1.5
NUP88-212ENST00000576708 BMP7P18075 431 aa5.69□□□□□ -1.5
NUP88-212ENST00000576708 TSPAN8P19075 237 aa5.69□□□□□ -1.5
NUP88-212ENST00000576708 CD40P25942 277 aa5.69□□□□□ -1.5
NUP88-212ENST00000576708 GDF1P27539 372 aa5.69□□□□□ -1.5
NUP88-212ENST00000576708 SERPINB1P30740 379 aa5.69□□□□□ -1.5
NUP88-212ENST00000576708 TLX1P31314 330 aaPredicted RBP5.69□□□□□ -1.5
NUP88-212ENST00000576708 CASQ1P31415 396 aa5.69□□□□□ -1.5
NUP88-212ENST00000576708 STX2P32856 288 aa5.69□□□□□ -1.5
NUP88-212ENST00000576708 LSP1P33241 339 aa5.69□□□□□ -1.5
NUP88-212ENST00000576708 ARL1P40616 181 aaPredicted RBP5.69□□□□□ -1.5
NUP88-212ENST00000576708 PEX19P40855 299 aa5.69□□□□□ -1.5
NUP88-212ENST00000576708 PIK3CBP42338 1070 aa5.69□□□□□ -1.5
NUP88-212ENST00000576708 AGFG1P52594 562 aaKnown RBP5.69□□□□□ -1.5
NUP88-212ENST00000576708 ART1P52961 327 aa5.69□□□□□ -1.5
NUP88-212ENST00000576708 RIPPLY3P57055 190 aa5.69□□□□□ -1.5
NUP88-212ENST00000576708 FBXW4P57775 412 aa5.69□□□□□ -1.5
NUP88-212ENST00000576708 ILF2Q12905 390 aaKnown RBP5.69□□□□□ -1.5
NUP88-212ENST00000576708 NNATQ16517 81 aa5.69□□□□□ -1.5
NUP88-212ENST00000576708 SGO1Q5FBB7 561 aa5.69□□□□□ -1.5
NUP88-212ENST00000576708 TECRLQ5HYJ1 363 aa5.69□□□□□ -1.5
NUP88-212ENST00000576708 WLSQ5T9L3 541 aa5.69□□□□□ -1.5
NUP88-212ENST00000576708 LIPJQ5W064 366 aa5.69□□□□□ -1.5
NUP88-212ENST00000576708 KANK2Q63ZY3 851 aa5.69□□□□□ -1.5
NUP88-212ENST00000576708 FAM180BQ6P0A1 224 aa5.69□□□□□ -1.5
NUP88-212ENST00000576708 CYP20A1Q6UW02 462 aa5.69□□□□□ -1.5
NUP88-212ENST00000576708 RPS27LQ71UM5 84 aaKnown RBP5.69□□□□□ -1.5
NUP88-212ENST00000576708 SLC29A4Q7RTT9 530 aa5.69□□□□□ -1.5
NUP88-212ENST00000576708 WDR53Q7Z5U6 358 aaPredicted RBP5.69□□□□□ -1.5
NUP88-212ENST00000576708 ZZZ3Q8IYH5 903 aa5.69□□□□□ -1.5
NUP88-212ENST00000576708 ULK2Q8IYT8 1036 aa5.69□□□□□ -1.5
NUP88-212ENST00000576708 ST13P4Q8IZP2 240 aaPredicted RBP5.69□□□□□ -1.5
NUP88-212ENST00000576708 LRRC25Q8N386 305 aaPredicted RBP5.69□□□□□ -1.5
NUP88-212ENST00000576708 FBXW8Q8N3Y1 598 aa5.69□□□□□ -1.5
NUP88-212ENST00000576708 ZCCHC7Q8N3Z6 543 aaKnown RBP5.69□□□□□ -1.5
NUP88-212ENST00000576708 PTGR2Q8N8N7 351 aaPredicted RBP5.69□□□□□ -1.5
NUP88-212ENST00000576708 ZNF441Q8N8Z8 693 aa5.69□□□□□ -1.5
NUP88-212ENST00000576708 ZNF610Q8N9Z0 462 aa5.69□□□□□ -1.5
NUP88-212ENST00000576708 RELL2Q8NC24 303 aaPredicted RBP5.69□□□□□ -1.5
NUP88-212ENST00000576708 CLRN3Q8NCR9 226 aa5.69□□□□□ -1.5
NUP88-212ENST00000576708 NAXEQ8NCW5 288 aa5.69□□□□□ -1.5
NUP88-212ENST00000576708 SIMC1Q8NDZ2 872 aa5.69□□□□□ -1.5
NUP88-212ENST00000576708 TNIP2Q8NFZ5 429 aa5.69□□□□□ -1.5
NUP88-212ENST00000576708 OR52B6Q8NGF0 335 aa5.69□□□□□ -1.5
NUP88-212ENST00000576708 WDR20Q8TBZ3 569 aa5.69□□□□□ -1.5
NUP88-212ENST00000576708 SARAFQ96BY9 339 aa5.69□□□□□ -1.5
NUP88-212ENST00000576708 PHF21BQ96EK2 531 aa5.69□□□□□ -1.5
NUP88-212ENST00000576708 FOXB1Q99853 325 aa5.69□□□□□ -1.5
NUP88-212ENST00000576708 LRRC1Q9BTT6 524 aa5.69□□□□□ -1.5
NUP88-212ENST00000576708 DOHHQ9BU89 302 aa5.69□□□□□ -1.5
NUP88-212ENST00000576708 NOL11Q9H8H0 719 aaKnown RBP5.69□□□□□ -1.5
NUP88-212ENST00000576708 DDX31Q9H8H2 851 aaKnown RBP5.69□□□□□ -1.5
NUP88-212ENST00000576708 CXorf21Q9HAI6 301 aa5.69□□□□□ -1.5
NUP88-212ENST00000576708 ZBTB26Q9HCK0 441 aa5.69□□□□□ -1.5
NUP88-212ENST00000576708 ZDHHC18Q9NUE0 388 aa5.69□□□□□ -1.5
NUP88-212ENST00000576708 LYARQ9NX58 379 aaKnown RBP5.69□□□□□ -1.5
NUP88-212ENST00000576708 NINJ2Q9NZG7 142 aa5.69□□□□□ -1.5
NUP88-212ENST00000576708 KCNN3Q9UGI6 736 aa5.69□□□□□ -1.5
NUP88-212ENST00000576708 MCM8Q9UJA3 840 aa5.69□□□□□ -1.5
NUP88-212ENST00000576708 CDC42EP3Q9UKI2 254 aa5.69□□□□□ -1.5
NUP88-212ENST00000576708 BOKQ9UMX3 212 aaPredicted RBP5.69□□□□□ -1.5
NUP88-212ENST00000576708 SLC6A5Q9Y345 797 aa5.69□□□□□ -1.5
NUP88-212ENST00000576708 UTP11Q9Y3A2 253 aaKnown RBP5.69□□□□□ -1.5
NUP88-212ENST00000576708 L3MBTL1Q9Y468 752 aa5.69□□□□□ -1.5
NUP88-212ENST00000576708 HIVEP1P15822 2718 aa5.68□□□□□ -1.5
NUP88-212ENST00000576708 C15orf38-AP3S2A0A0A6YYH1 394 aa5.68□□□□□ -1.5
NUP88-212ENST00000576708 C2orf92A0A1B0GVN3 265 aa5.68□□□□□ -1.5
NUP88-212ENST00000576708 SYCE1LA8MT33 242 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms