RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 TRHRP34981 398 aaPredicted RBP17.88■□□□□ 0.45
SCARF1-206ENST00000573852 OMPP47874 163 aa17.88■□□□□ 0.45
SCARF1-206ENST00000573852 GZMKP49863 264 aa17.88■□□□□ 0.45
SCARF1-206ENST00000573852 CTBP2P56545 445 aa17.88■□□□□ 0.45
SCARF1-206ENST00000573852 ERVFC1P60507 584 aa17.88■□□□□ 0.45
SCARF1-206ENST00000573852 ZNF311Q5JNZ3 666 aa17.88■□□□□ 0.45
SCARF1-206ENST00000573852 VASNQ6EMK4 673 aa17.88■□□□□ 0.45
SCARF1-206ENST00000573852 METAP1DQ6UB28 335 aaPredicted RBP17.88■□□□□ 0.45
SCARF1-206ENST00000573852 FAM20CQ8IXL6 584 aa17.88■□□□□ 0.45
SCARF1-206ENST00000573852 BBS1Q8NFJ9 593 aa17.88■□□□□ 0.45
SCARF1-206ENST00000573852 DIO2Q92813 273 aa17.88■□□□□ 0.45
SCARF1-206ENST00000573852 HHIPL1Q96JK4 782 aa17.88■□□□□ 0.45
SCARF1-206ENST00000573852 PCBD2Q9H0N5 130 aa17.88■□□□□ 0.45
SCARF1-206ENST00000573852 C11orf49Q9H6J7 331 aa17.88■□□□□ 0.45
SCARF1-206ENST00000573852 POLMQ9NP87 494 aaPredicted RBP17.88■□□□□ 0.45
SCARF1-206ENST00000573852 NTNG1Q9Y2I2 539 aa17.88■□□□□ 0.45
SCARF1-206ENST00000573852 CHST2Q9Y4C5 530 aa17.88■□□□□ 0.45
SCARF1-206ENST00000573852 CARNS1A5YM72 827 aa17.88■□□□□ 0.45
SCARF1-206ENST00000573852 GNG2P59768 71 aa17.88■□□□□ 0.45
SCARF1-206ENST00000573852 TRA2BP62995 288 aaKnown RBP17.88■□□□□ 0.45
SCARF1-206ENST00000573852 TRAM2Q15035 370 aa17.88■□□□□ 0.45
SCARF1-206ENST00000573852 PIP5KL1Q5T9C9 394 aa17.88■□□□□ 0.45
SCARF1-206ENST00000573852 METRNLQ641Q3 311 aa17.88■□□□□ 0.45
SCARF1-206ENST00000573852 TMEM107Q6UX40 140 aa17.88■□□□□ 0.45
SCARF1-206ENST00000573852 PEX5LQ8IYB4 626 aa17.88■□□□□ 0.45
SCARF1-206ENST00000573852 TMIEQ8NEW7 156 aa17.88■□□□□ 0.45
SCARF1-206ENST00000573852 OTUB2Q96DC9 234 aa17.88■□□□□ 0.45
SCARF1-206ENST00000573852 CNRIP1Q96F85 164 aaPredicted RBP17.88■□□□□ 0.45
SCARF1-206ENST00000573852 KCNJ15Q99712 375 aa17.88■□□□□ 0.45
SCARF1-206ENST00000573852 IRAK3Q9Y616 596 aa17.88■□□□□ 0.45
SCARF1-206ENST00000573852 LTBP2Q14767 1821 aa17.88■□□□□ 0.45
SCARF1-206ENST00000573852 A0A0G2JMP0 313 aa17.87■□□□□ 0.45
SCARF1-206ENST00000573852 LOC102723532A0A0G2JNH3 316 aa17.87■□□□□ 0.45
SCARF1-206ENST00000573852 SURF4O15260 269 aa17.87■□□□□ 0.45
SCARF1-206ENST00000573852 HLA-DPB1P04440 258 aa17.87■□□□□ 0.45
SCARF1-206ENST00000573852 ADH5P11766 374 aa17.87■□□□□ 0.45
SCARF1-206ENST00000573852 IFNGR2P38484 337 aa17.87■□□□□ 0.45
SCARF1-206ENST00000573852 CLDN20P56880 219 aa17.87■□□□□ 0.45
SCARF1-206ENST00000573852 GPLD1P80108 840 aa17.87■□□□□ 0.45
SCARF1-206ENST00000573852 WSCD2Q2TBF2 565 aa17.87■□□□□ 0.45
SCARF1-206ENST00000573852 FNDC3BQ53EP0 1204 aaKnown RBP17.87■□□□□ 0.45
SCARF1-206ENST00000573852 TIGD3Q6B0B8 471 aa17.87■□□□□ 0.45
SCARF1-206ENST00000573852 LYPD8Q6UX82 237 aa17.87■□□□□ 0.45
SCARF1-206ENST00000573852 ERN2Q76MJ5 926 aaKnown RBP17.87■□□□□ 0.45
SCARF1-206ENST00000573852 NKAIN4Q8IVV8 208 aa17.87■□□□□ 0.45
SCARF1-206ENST00000573852 SPRYD4Q8WW59 207 aaPredicted RBP17.87■□□□□ 0.45
SCARF1-206ENST00000573852 OR8D1Q8WZ84 308 aa17.87■□□□□ 0.45
SCARF1-206ENST00000573852 GON7Q9BXV9 100 aa17.87■□□□□ 0.45
SCARF1-206ENST00000573852 SLC38A1Q9H2H9 487 aa17.87■□□□□ 0.45
SCARF1-206ENST00000573852 IL20RAQ9UHF4 553 aa17.87■□□□□ 0.45
SCARF1-206ENST00000573852 TBX21Q9UL17 535 aa17.87■□□□□ 0.45
SCARF1-206ENST00000573852 A0A1W2PR48 441 aa17.87■□□□□ 0.45
SCARF1-206ENST00000573852 ZNF780AO75290 641 aaPredicted RBP17.87■□□□□ 0.45
SCARF1-206ENST00000573852 CLEC3AO75596 197 aa17.87■□□□□ 0.45
SCARF1-206ENST00000573852 SLC2A10O95528 541 aa17.87■□□□□ 0.45
SCARF1-206ENST00000573852 HSD17B2P37059 387 aa17.87■□□□□ 0.45
SCARF1-206ENST00000573852 ABATP80404 500 aa17.87■□□□□ 0.45
SCARF1-206ENST00000573852 TMEM64Q6YI46 380 aa17.87■□□□□ 0.45
SCARF1-206ENST00000573852 TRILQ7L0X0 811 aa17.87■□□□□ 0.45
SCARF1-206ENST00000573852 OR8K5Q8NH50 307 aa17.87■□□□□ 0.45
SCARF1-206ENST00000573852 CAMK1GQ96NX5 476 aa17.87■□□□□ 0.45
SCARF1-206ENST00000573852 ARHGDIGQ99819 225 aa17.87■□□□□ 0.45
SCARF1-206ENST00000573852 ATG4BQ9Y4P1 393 aa17.87■□□□□ 0.45
SCARF1-206ENST00000573852 RPN2P04844 631 aa17.86■□□□□ 0.45
SCARF1-206ENST00000573852 IL12RB1P42701 662 aa17.86■□□□□ 0.45
SCARF1-206ENST00000573852 CLCNKAP51800 687 aa17.86■□□□□ 0.45
SCARF1-206ENST00000573852 FZD5Q13467 585 aa17.86■□□□□ 0.45
SCARF1-206ENST00000573852 DSG2Q14126 1118 aa17.86■□□□□ 0.45
SCARF1-206ENST00000573852 HNRNPA1L2Q32P51 320 aaKnown RBP17.86■□□□□ 0.45
SCARF1-206ENST00000573852 TMEM52BQ4KMG9 183 aa17.86■□□□□ 0.45
SCARF1-206ENST00000573852 EOGTQ5NDL2 527 aa17.86■□□□□ 0.45
SCARF1-206ENST00000573852 B3GLCTQ6Y288 498 aa17.86■□□□□ 0.45
SCARF1-206ENST00000573852 TMEM91Q6ZNR0 172 aa17.86■□□□□ 0.45
SCARF1-206ENST00000573852 RRM2BQ7LG56 351 aa17.86■□□□□ 0.45
SCARF1-206ENST00000573852 LRRTM4Q86VH4 590 aa17.86■□□□□ 0.45
SCARF1-206ENST00000573852 SFTPA1Q8IWL2 248 aa17.86■□□□□ 0.45
SCARF1-206ENST00000573852 SMG7Q92540 1137 aaKnown RBP17.86■□□□□ 0.45
SCARF1-206ENST00000573852 TRIM63Q969Q1 353 aa17.86■□□□□ 0.45
SCARF1-206ENST00000573852 FAIM2Q9BWQ8 316 aa17.86■□□□□ 0.45
SCARF1-206ENST00000573852 PITHD1Q9GZP4 211 aaPredicted RBP17.86■□□□□ 0.45
SCARF1-206ENST00000573852 XKR8Q9H6D3 395 aa17.86■□□□□ 0.45
SCARF1-206ENST00000573852 EQTNQ9NQ60 294 aa17.86■□□□□ 0.45
SCARF1-206ENST00000573852 TMEM39AQ9NV64 488 aa17.86■□□□□ 0.45
SCARF1-206ENST00000573852 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.86■□□□□ 0.45
SCARF1-206ENST00000573852 SMLR1H3BR10 107 aa17.86■□□□□ 0.45
SCARF1-206ENST00000573852 TNFRSF10AO00220 468 aa17.86■□□□□ 0.45
SCARF1-206ENST00000573852 AKR7A2O43488 359 aa17.86■□□□□ 0.45
SCARF1-206ENST00000573852 AKAP8O43823 692 aaKnown RBP17.86■□□□□ 0.45
SCARF1-206ENST00000573852 LINC00271P0C7V0 271 aa17.86■□□□□ 0.45
SCARF1-206ENST00000573852 CHRNB1P11230 501 aa17.86■□□□□ 0.45
SCARF1-206ENST00000573852 HOXB3P14651 431 aaPredicted RBP17.86■□□□□ 0.45
SCARF1-206ENST00000573852 GPR4P46093 362 aa17.86■□□□□ 0.45
SCARF1-206ENST00000573852 RIN1Q13671 783 aa17.86■□□□□ 0.45
SCARF1-206ENST00000573852 GNA13Q14344 377 aa17.86■□□□□ 0.45
SCARF1-206ENST00000573852 KLHL36Q8N4N3 616 aa17.86■□□□□ 0.45
SCARF1-206ENST00000573852 PIGXQ8TBF5 258 aa17.86■□□□□ 0.45
SCARF1-206ENST00000573852 DNAJA4Q8WW22 397 aaPredicted RBP17.86■□□□□ 0.45
SCARF1-206ENST00000573852 RFKQ969G6 155 aa17.86■□□□□ 0.45
SCARF1-206ENST00000573852 OR7D2Q96RA2 312 aa17.86■□□□□ 0.45
SCARF1-206ENST00000573852 MARVELD1Q9BSK0 173 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms