RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 ALDH6A1Q02252 535 aaKnown RBP14.51□□□□□ -0.09
CHD3-215ENST00000572750 LASP1Q14847 261 aaKnown RBP14.51□□□□□ -0.09
CHD3-215ENST00000572750 ZNHIT3Q15649 155 aaPredicted RBP14.51□□□□□ -0.09
CHD3-215ENST00000572750 PAOXQ6QHF9 649 aa14.51□□□□□ -0.09
CHD3-215ENST00000572750 GK5Q6ZS86 529 aa14.51□□□□□ -0.09
CHD3-215ENST00000572750 SIAH3Q8IW03 269 aa14.51□□□□□ -0.09
CHD3-215ENST00000572750 MIER2Q8N344 545 aa14.51□□□□□ -0.09
CHD3-215ENST00000572750 ZFP62Q8NB50 900 aaPredicted RBP14.51□□□□□ -0.09
CHD3-215ENST00000572750 GALNT11Q8NCW6 608 aa14.51□□□□□ -0.09
CHD3-215ENST00000572750 SPPL2AQ8TCT8 520 aa14.51□□□□□ -0.09
CHD3-215ENST00000572750 PIK3R3Q92569 461 aa14.51□□□□□ -0.09
CHD3-215ENST00000572750 SLC9A6Q92581 669 aa14.51□□□□□ -0.09
CHD3-215ENST00000572750 HGDQ93099 445 aa14.51□□□□□ -0.09
CHD3-215ENST00000572750 C16orf58Q96GQ5 468 aa14.51□□□□□ -0.09
CHD3-215ENST00000572750 ADOQ96SZ5 270 aa14.51□□□□□ -0.09
CHD3-215ENST00000572750 FAM173AQ9BQD7 235 aa14.51□□□□□ -0.09
CHD3-215ENST00000572750 YIPF4Q9BSR8 244 aa14.51□□□□□ -0.09
CHD3-215ENST00000572750 CCDC28BQ9BUN5 200 aa14.51□□□□□ -0.09
CHD3-215ENST00000572750 PROK2Q9HC23 129 aa14.51□□□□□ -0.09
CHD3-215ENST00000572750 TUBA8Q9NY65 449 aaPredicted RBP14.51□□□□□ -0.09
CHD3-215ENST00000572750 A0A0G2JND7 137 aa14.5□□□□□ -0.09
CHD3-215ENST00000572750 RNF103-CHMP3A0A140T963 221 aa14.5□□□□□ -0.09
CHD3-215ENST00000572750 GXYLT2A0PJZ3 443 aa14.5□□□□□ -0.09
CHD3-215ENST00000572750 HS6ST1O60243 411 aa14.5□□□□□ -0.09
CHD3-215ENST00000572750 SCN2BO60939 215 aa14.5□□□□□ -0.09
CHD3-215ENST00000572750 REM1O75628 298 aa14.5□□□□□ -0.09
CHD3-215ENST00000572750 SLC22A3O75751 556 aa14.5□□□□□ -0.09
CHD3-215ENST00000572750 HMGN2P05204 90 aaKnown RBP14.5□□□□□ -0.09
CHD3-215ENST00000572750 PGRP06401 933 aa14.5□□□□□ -0.09
CHD3-215ENST00000572750 VIMP08670 466 aaKnown RBP14.5□□□□□ -0.09
CHD3-215ENST00000572750 ACP2P11117 423 aa14.5□□□□□ -0.09
CHD3-215ENST00000572750 EDN3P14138 238 aa14.5□□□□□ -0.09
CHD3-215ENST00000572750 CNR1P21554 472 aa14.5□□□□□ -0.09
CHD3-215ENST00000572750 GABRA3P34903 492 aa14.5□□□□□ -0.09
CHD3-215ENST00000572750 KRT20P35900 424 aa14.5□□□□□ -0.09
CHD3-215ENST00000572750 ZFP36L2P47974 494 aaKnown RBP14.5□□□□□ -0.09
CHD3-215ENST00000572750 RFX3P48380 749 aa14.5□□□□□ -0.09
CHD3-215ENST00000572750 CCT3P49368 545 aaKnown RBP14.5□□□□□ -0.09
CHD3-215ENST00000572750 STX1BP61266 288 aa14.5□□□□□ -0.09
CHD3-215ENST00000572750 RPS26P62854 115 aaKnown RBP14.5□□□□□ -0.09
CHD3-215ENST00000572750 PLGLB1Q02325 96 aa14.5□□□□□ -0.09
CHD3-215ENST00000572750 SF3A3Q12874 501 aaKnown RBP eCLIP14.5□□□□□ -0.09
CHD3-215ENST00000572750 GAB1Q13480 694 aa14.5□□□□□ -0.09
CHD3-215ENST00000572750 DUSP5Q16690 384 aa14.5□□□□□ -0.09
CHD3-215ENST00000572750 TIGD2Q4W5G0 525 aa14.5□□□□□ -0.09
CHD3-215ENST00000572750 ANXA8L1Q5VT79 327 aa14.5□□□□□ -0.09
CHD3-215ENST00000572750 CGB2Q6NT52 195 aa14.5□□□□□ -0.09
CHD3-215ENST00000572750 GALNT10Q86SR1 603 aa14.5□□□□□ -0.09
CHD3-215ENST00000572750 CDRT4Q8N9R6 151 aa14.5□□□□□ -0.09
CHD3-215ENST00000572750 POGLUT1Q8NBL1 392 aa14.5□□□□□ -0.09
CHD3-215ENST00000572750 SLC16A11Q8NCK7 471 aa14.5□□□□□ -0.09
CHD3-215ENST00000572750 ST6GALNAC3Q8NDV1 305 aa14.5□□□□□ -0.09
CHD3-215ENST00000572750 OR56A1Q8NGH5 318 aa14.5□□□□□ -0.09
CHD3-215ENST00000572750 DNAJB8Q8NHS0 232 aa14.5□□□□□ -0.09
CHD3-215ENST00000572750 SFXN5Q8TD22 340 aa14.5□□□□□ -0.09
CHD3-215ENST00000572750 GPR151Q8TDV0 419 aa14.5□□□□□ -0.09
CHD3-215ENST00000572750 HOXB13Q92826 284 aaPredicted RBP14.5□□□□□ -0.09
CHD3-215ENST00000572750 RMND5BQ96G75 393 aaPredicted RBP14.5□□□□□ -0.09
CHD3-215ENST00000572750 RILPQ96NA2 401 aa14.5□□□□□ -0.09
CHD3-215ENST00000572750 COL21A1Q96P44 957 aa14.5□□□□□ -0.09
CHD3-215ENST00000572750 NODALQ96S42 347 aa14.5□□□□□ -0.09
CHD3-215ENST00000572750 DOHHQ9BU89 302 aa14.5□□□□□ -0.09
CHD3-215ENST00000572750 TTTY12Q9BZ98 90 aa14.5□□□□□ -0.09
CHD3-215ENST00000572750 METTL7AQ9H8H3 244 aa14.5□□□□□ -0.09
CHD3-215ENST00000572750 Q9N2J8 555 aa14.5□□□□□ -0.09
CHD3-215ENST00000572750 RYDENQ9NUL5 291 aaKnown RBP14.5□□□□□ -0.09
CHD3-215ENST00000572750 FAM120CQ9NX05 1096 aaKnown RBP14.5□□□□□ -0.09
CHD3-215ENST00000572750 ZIM2Q9NZV7 527 aa14.5□□□□□ -0.09
CHD3-215ENST00000572750 CNIH4Q9P003 139 aa14.5□□□□□ -0.09
CHD3-215ENST00000572750 CBLCQ9ULV8 474 aa14.5□□□□□ -0.09
CHD3-215ENST00000572750 PRSS51A0A1B0GVH4 220 aa14.49□□□□□ -0.09
CHD3-215ENST00000572750 ANKUB1A6NFN9 424 aa14.49□□□□□ -0.09
CHD3-215ENST00000572750 OR6C70A6NIJ9 312 aa14.49□□□□□ -0.09
CHD3-215ENST00000572750 LRRC3CA6NJW4 275 aa14.49□□□□□ -0.09
CHD3-215ENST00000572750 NPIPA5E9PKD4 350 aa14.49□□□□□ -0.09
CHD3-215ENST00000572750 TSPAN2O60636 221 aa14.49□□□□□ -0.09
CHD3-215ENST00000572750 UNC5CO95185 931 aa14.49□□□□□ -0.09
CHD3-215ENST00000572750 CBX6O95503 412 aa14.49□□□□□ -0.09
CHD3-215ENST00000572750 CPSF4O95639 269 aaKnown RBP14.49□□□□□ -0.09
CHD3-215ENST00000572750 NAGAP17050 411 aa14.49□□□□□ -0.09
CHD3-215ENST00000572750 COL8A1P27658 744 aa14.49□□□□□ -0.09
CHD3-215ENST00000572750 MDH1P40925 334 aaKnown RBP14.49□□□□□ -0.09
CHD3-215ENST00000572750 MAP3K8P41279 467 aa14.49□□□□□ -0.09
CHD3-215ENST00000572750 KCNK10P57789 538 aa14.49□□□□□ -0.09
CHD3-215ENST00000572750 PSPHP78330 225 aa14.49□□□□□ -0.09
CHD3-215ENST00000572750 FOXO1Q12778 655 aa14.49□□□□□ -0.09
CHD3-215ENST00000572750 VPS26BQ4G0F5 336 aa14.49□□□□□ -0.09
CHD3-215ENST00000572750 DNAJC14Q6Y2X3 702 aaPredicted RBP14.49□□□□□ -0.09
CHD3-215ENST00000572750 GLB1L3Q8NCI6 653 aaPredicted RBP14.49□□□□□ -0.09
CHD3-215ENST00000572750 CHMP6Q96FZ7 201 aa14.49□□□□□ -0.09
CHD3-215ENST00000572750 SLC35A4Q96G79 324 aa14.49□□□□□ -0.09
CHD3-215ENST00000572750 JSRP1Q96MG2 331 aaPredicted RBP14.49□□□□□ -0.09
CHD3-215ENST00000572750 OR52E6Q96RD3 313 aa14.49□□□□□ -0.09
CHD3-215ENST00000572750 CCDC134Q9H6E4 229 aa14.49□□□□□ -0.09
CHD3-215ENST00000572750 GALNT9Q9HCQ5 603 aa14.49□□□□□ -0.09
CHD3-215ENST00000572750 GPATCH2Q9NW75 528 aa14.49□□□□□ -0.09
CHD3-215ENST00000572750 KLRF1Q9NZS2 232 aa14.49□□□□□ -0.09
CHD3-215ENST00000572750 SEC14L3Q9UDX4 400 aa14.49□□□□□ -0.09
CHD3-215ENST00000572750 NPIPA1Q9UND3 350 aa14.49□□□□□ -0.09
CHD3-215ENST00000572750 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms