RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 GPLD1P80108 840 aa10.11□□□□□ -0.79
CCDC40-207ENST00000572253 SLC9A5Q14940 896 aa10.11□□□□□ -0.79
CCDC40-207ENST00000572253 OLIG3Q7RTU3 272 aa10.11□□□□□ -0.79
CCDC40-207ENST00000572253 PRICKLE2Q7Z3G6 844 aa10.11□□□□□ -0.79
CCDC40-207ENST00000572253 ZNF547Q8IVP9 402 aa10.11□□□□□ -0.79
CCDC40-207ENST00000572253 SPRYD4Q8WW59 207 aaPredicted RBP10.11□□□□□ -0.79
CCDC40-207ENST00000572253 C17orf62Q9BQA9 187 aa10.11□□□□□ -0.79
CCDC40-207ENST00000572253 ANKRD19PQ9H560 264 aa10.11□□□□□ -0.79
CCDC40-207ENST00000572253 B3GAT2Q9NPZ5 323 aa10.11□□□□□ -0.79
CCDC40-207ENST00000572253 NCKAP1Q9Y2A7 1128 aa10.11□□□□□ -0.79
CCDC40-207ENST00000572253 PRKAB1Q9Y478 270 aa10.11□□□□□ -0.79
CCDC40-207ENST00000572253 CEP350Q5VT06 3117 aa10.11□□□□□ -0.79
CCDC40-207ENST00000572253 OBSL1O75147 1896 aa10.11□□□□□ -0.79
CCDC40-207ENST00000572253 KIAA0355O15063 1070 aa10.11□□□□□ -0.79
CCDC40-207ENST00000572253 LRRTM2O43300 516 aa10.11□□□□□ -0.79
CCDC40-207ENST00000572253 CXCL14O95715 111 aa10.11□□□□□ -0.79
CCDC40-207ENST00000572253 ACP5P13686 325 aa10.11□□□□□ -0.79
CCDC40-207ENST00000572253 P2RX3P56373 397 aa10.11□□□□□ -0.79
CCDC40-207ENST00000572253 RGS8P57771 180 aaPredicted RBP10.11□□□□□ -0.79
CCDC40-207ENST00000572253 SNRPD2P62316 118 aaKnown RBP10.11□□□□□ -0.79
CCDC40-207ENST00000572253 BTG1P62324 171 aa10.11□□□□□ -0.79
CCDC40-207ENST00000572253 ABATP80404 500 aa10.11□□□□□ -0.79
CCDC40-207ENST00000572253 TGM3Q08188 693 aa10.11□□□□□ -0.79
CCDC40-207ENST00000572253 C9orf64Q5T6V5 341 aa10.11□□□□□ -0.79
CCDC40-207ENST00000572253 SLC30A6Q6NXT4 461 aa10.11□□□□□ -0.79
CCDC40-207ENST00000572253 C16orf62Q7Z3J2 963 aa10.11□□□□□ -0.79
CCDC40-207ENST00000572253 KIAA0907Q7Z7F0 614 aaPredicted RBP10.11□□□□□ -0.79
CCDC40-207ENST00000572253 FAM109AQ8N4B1 249 aa10.11□□□□□ -0.79
CCDC40-207ENST00000572253 FGF11Q92914 225 aa10.11□□□□□ -0.79
CCDC40-207ENST00000572253 UPRTQ96BW1 309 aa10.11□□□□□ -0.79
CCDC40-207ENST00000572253 FCRL4Q96PJ5 515 aa10.11□□□□□ -0.79
CCDC40-207ENST00000572253 KIAA1671Q9BY89 1806 aa10.1□□□□□ -0.79
CCDC40-207ENST00000572253 C2orf92A0A1B0GVN3 265 aa10.1□□□□□ -0.79
CCDC40-207ENST00000572253 A0A1W2PQ72 361 aa10.1□□□□□ -0.79
CCDC40-207ENST00000572253 C12orf71A8MTZ7 269 aa10.1□□□□□ -0.79
CCDC40-207ENST00000572253 ERVH48-1M5A8F1 160 aa10.1□□□□□ -0.79
CCDC40-207ENST00000572253 NRG2O14511 850 aaPredicted RBP10.1□□□□□ -0.79
CCDC40-207ENST00000572253 CLEC3AO75596 197 aa10.1□□□□□ -0.79
CCDC40-207ENST00000572253 PAPLNO95428 1278 aa10.1□□□□□ -0.79
CCDC40-207ENST00000572253 CRYZL1O95825 349 aa10.1□□□□□ -0.79
CCDC40-207ENST00000572253 HMGN2P05204 90 aaKnown RBP10.1□□□□□ -0.79
CCDC40-207ENST00000572253 SLC35G4P0C7Q5 338 aa10.1□□□□□ -0.79
CCDC40-207ENST00000572253 ACSM1Q08AH1 577 aa10.1□□□□□ -0.79
CCDC40-207ENST00000572253 TMEM35AQ53FP2 167 aa10.1□□□□□ -0.79
CCDC40-207ENST00000572253 LUZP2Q86TE4 346 aa10.1□□□□□ -0.79
CCDC40-207ENST00000572253 KLBQ86Z14 1044 aa10.1□□□□□ -0.79
CCDC40-207ENST00000572253 OR8D4Q8NGM9 314 aa10.1□□□□□ -0.79
CCDC40-207ENST00000572253 CXorf40AQ8TE69 158 aa10.1□□□□□ -0.79
CCDC40-207ENST00000572253 RFT1Q96AA3 541 aa10.1□□□□□ -0.79
CCDC40-207ENST00000572253 HCFC1R1Q9NWW0 138 aa10.1□□□□□ -0.79
CCDC40-207ENST00000572253 MRPL39Q9NYK5 338 aaKnown RBP10.1□□□□□ -0.79
CCDC40-207ENST00000572253 GALP22466 123 aa10.1□□□□□ -0.79
CCDC40-207ENST00000572253 HTR1FP30939 366 aa10.1□□□□□ -0.79
CCDC40-207ENST00000572253 CCR2P41597 374 aa10.1□□□□□ -0.79
CCDC40-207ENST00000572253 CTBP2P56545 445 aa10.1□□□□□ -0.79
CCDC40-207ENST00000572253 LSM11P83369 360 aaKnown RBP eCLIP10.1□□□□□ -0.79
CCDC40-207ENST00000572253 DPTQ07507 201 aa10.1□□□□□ -0.79
CCDC40-207ENST00000572253 PGGHGQ32M88 737 aa10.1□□□□□ -0.79
CCDC40-207ENST00000572253 FNDC3BQ53EP0 1204 aaKnown RBP10.1□□□□□ -0.79
CCDC40-207ENST00000572253 TMCO2Q7Z6W1 182 aaPredicted RBP10.1□□□□□ -0.79
CCDC40-207ENST00000572253 COMTD1Q86VU5 262 aa10.1□□□□□ -0.79
CCDC40-207ENST00000572253 CCDC28AQ8IWP9 274 aa10.1□□□□□ -0.79
CCDC40-207ENST00000572253 SLAIN1Q8ND83 568 aa10.1□□□□□ -0.79
CCDC40-207ENST00000572253 OR5K2Q8NHB8 316 aa10.1□□□□□ -0.79
CCDC40-207ENST00000572253 DNAJA4Q8WW22 397 aaPredicted RBP10.1□□□□□ -0.79
CCDC40-207ENST00000572253 ACOT11Q8WXI4 607 aaPredicted RBP10.1□□□□□ -0.79
CCDC40-207ENST00000572253 TTC9Q92623 222 aa10.1□□□□□ -0.79
CCDC40-207ENST00000572253 TCEAL4Q96EI5 215 aa10.1□□□□□ -0.79
CCDC40-207ENST00000572253 MKRN2Q9H000 416 aaKnown RBP10.1□□□□□ -0.79
CCDC40-207ENST00000572253 GALNT9Q9HCQ5 603 aa10.1□□□□□ -0.79
CCDC40-207ENST00000572253 LIPT1Q9Y234 373 aa10.1□□□□□ -0.79
CCDC40-207ENST00000572253 TSC22D2O75157 780 aa10.1□□□□□ -0.79
CCDC40-207ENST00000572253 TBX6O95947 436 aaPredicted RBP10.1□□□□□ -0.79
CCDC40-207ENST00000572253 CSNK2A2P19784 350 aaPredicted RBP10.1□□□□□ -0.79
CCDC40-207ENST00000572253 FPR3P25089 353 aa10.1□□□□□ -0.79
CCDC40-207ENST00000572253 CD79BP40259 229 aa10.1□□□□□ -0.79
CCDC40-207ENST00000572253 OR3A3P47888 321 aa10.1□□□□□ -0.79
CCDC40-207ENST00000572253 MTNR1BP49286 362 aa10.1□□□□□ -0.79
CCDC40-207ENST00000572253 LRRTM4Q86VH4 590 aa10.1□□□□□ -0.79
CCDC40-207ENST00000572253 ELMOD2Q8IZ81 293 aa10.1□□□□□ -0.79
CCDC40-207ENST00000572253 OR2T33Q8NG76 320 aa10.1□□□□□ -0.79
CCDC40-207ENST00000572253 SLC28A3Q9HAS3 691 aa10.1□□□□□ -0.79
CCDC40-207ENST00000572253 MARK1Q9P0L2 795 aa10.1□□□□□ -0.79
CCDC40-207ENST00000572253 ZNF624Q9P2J8 865 aaPredicted RBP10.1□□□□□ -0.79
CCDC40-207ENST00000572253 CKAP5Q14008 2032 aa10.1□□□□□ -0.79
CCDC40-207ENST00000572253 PSMB5P28074 263 aa10.09□□□□□ -0.79
CCDC40-207ENST00000572253 ACSL1P33121 698 aa10.09□□□□□ -0.79
CCDC40-207ENST00000572253 AADACL4Q5VUY2 407 aa10.09□□□□□ -0.79
CCDC40-207ENST00000572253 LRRC28Q86X40 367 aaPredicted RBP10.09□□□□□ -0.79
CCDC40-207ENST00000572253 GID4Q8IVV7 300 aa10.09□□□□□ -0.79
CCDC40-207ENST00000572253 ARIH2OSQ8N7S6 290 aa10.09□□□□□ -0.79
CCDC40-207ENST00000572253 OR8H1Q8NGG4 311 aa10.09□□□□□ -0.79
CCDC40-207ENST00000572253 OR5H6Q8NGV6 325 aa10.09□□□□□ -0.79
CCDC40-207ENST00000572253 ZBP1Q9H171 429 aa10.09□□□□□ -0.79
CCDC40-207ENST00000572253 ENAMQ9NRM1 1142 aa10.09□□□□□ -0.79
CCDC40-207ENST00000572253 CDH10Q9Y6N8 788 aa10.09□□□□□ -0.79
CCDC40-207ENST00000572253 SCN5AQ14524 2016 aa10.09□□□□□ -0.79
CCDC40-207ENST00000572253 A0A0A6YYD5 115 aa10.09□□□□□ -0.79
CCDC40-207ENST00000572253 GLOD5A6NK44 160 aa10.09□□□□□ -0.79
CCDC40-207ENST00000572253 SURF4O15260 269 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms