RNA–Protein interactions for RNA: ENST00000571252.2

PCDHGA4-201, Transcript of protocadherin gamma subfamily A, 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA4, Length 4,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4-201ENST00000571252 DOK1Q99704 481 aa10.52□□□□□ -0.73
PCDHGA4-201ENST00000571252 SLC6A15Q9H2J7 730 aa10.52□□□□□ -0.73
PCDHGA4-201ENST00000571252 NANSQ9NR45 359 aa10.52□□□□□ -0.73
PCDHGA4-201ENST00000571252 COQ3Q9NZJ6 369 aa10.52□□□□□ -0.73
PCDHGA4-201ENST00000571252 MLXQ9UH92 298 aa10.52□□□□□ -0.73
PCDHGA4-201ENST00000571252 ZNF225Q9UK10 706 aa10.52□□□□□ -0.73
PCDHGA4-201ENST00000571252 ASB4Q9Y574 426 aa10.52□□□□□ -0.73
PCDHGA4-201ENST00000571252 KANTRA0A1W2PQU2 76 aa10.52□□□□□ -0.73
PCDHGA4-201ENST00000571252 SOX30O94993 753 aa10.52□□□□□ -0.73
PCDHGA4-201ENST00000571252 LHCGRP22888 699 aa10.52□□□□□ -0.73
PCDHGA4-201ENST00000571252 PITPNBP48739 271 aa10.52□□□□□ -0.73
PCDHGA4-201ENST00000571252 ARRB1P49407 418 aaPredicted RBP10.52□□□□□ -0.73
PCDHGA4-201ENST00000571252 LBX1P52954 281 aa10.52□□□□□ -0.73
PCDHGA4-201ENST00000571252 PUM1Q14671 1186 aaKnown RBP eCLIP10.52□□□□□ -0.73
PCDHGA4-201ENST00000571252 DEFB134Q4QY38 66 aa10.52□□□□□ -0.73
PCDHGA4-201ENST00000571252 TMEM35AQ53FP2 167 aa10.52□□□□□ -0.73
PCDHGA4-201ENST00000571252 TMEM164Q5U3C3 297 aa10.52□□□□□ -0.73
PCDHGA4-201ENST00000571252 PRAMEF17Q5VTA0 474 aa10.52□□□□□ -0.73
PCDHGA4-201ENST00000571252 PDZD3Q86UT5 571 aa10.52□□□□□ -0.73
PCDHGA4-201ENST00000571252 SDR16C5Q8N3Y7 309 aa10.52□□□□□ -0.73
PCDHGA4-201ENST00000571252 TRMT10AQ8TBZ6 339 aaKnown RBP10.52□□□□□ -0.73
PCDHGA4-201ENST00000571252 SPRYD4Q8WW59 207 aaPredicted RBP10.52□□□□□ -0.73
PCDHGA4-201ENST00000571252 CTRCQ99895 268 aa10.52□□□□□ -0.73
PCDHGA4-201ENST00000571252 RLIMQ9NVW2 624 aa10.52□□□□□ -0.73
PCDHGA4-201ENST00000571252 HTR1AP08908 422 aa10.51□□□□□ -0.73
PCDHGA4-201ENST00000571252 IMPA1P29218 277 aa10.51□□□□□ -0.73
PCDHGA4-201ENST00000571252 NKX3-2P78367 333 aa10.51□□□□□ -0.73
PCDHGA4-201ENST00000571252 ELAVL3Q14576 367 aaKnown RBP10.51□□□□□ -0.73
PCDHGA4-201ENST00000571252 TMEM69Q5SWH9 247 aa10.51□□□□□ -0.73
PCDHGA4-201ENST00000571252 RPL13AP3Q6NVV1 102 aa10.51□□□□□ -0.73
PCDHGA4-201ENST00000571252 OR8K3Q8NH51 312 aa10.51□□□□□ -0.73
PCDHGA4-201ENST00000571252 FOXJ1Q92949 421 aa10.51□□□□□ -0.73
PCDHGA4-201ENST00000571252 ISG20Q96AZ6 181 aaKnown RBP10.51□□□□□ -0.73
PCDHGA4-201ENST00000571252 TREX2Q9BQ50 279 aaPredicted RBP10.51□□□□□ -0.73
PCDHGA4-201ENST00000571252 ALG8Q9BVK2 526 aa10.51□□□□□ -0.73
PCDHGA4-201ENST00000571252 CPEB1Q9BZB8 566 aaKnown RBP10.51□□□□□ -0.73
PCDHGA4-201ENST00000571252 CWH43Q9H720 699 aa10.51□□□□□ -0.73
PCDHGA4-201ENST00000571252 PDFQ9HBH1 243 aa10.51□□□□□ -0.73
PCDHGA4-201ENST00000571252 WDR90Q96KV7 1748 aa10.51□□□□□ -0.73
PCDHGA4-201ENST00000571252 OR2AT4A6NND4 320 aa10.51□□□□□ -0.73
PCDHGA4-201ENST00000571252 B4GALT3O60512 393 aa10.51□□□□□ -0.73
PCDHGA4-201ENST00000571252 RFPL3O75679 317 aa10.51□□□□□ -0.73
PCDHGA4-201ENST00000571252 EPCAMP16422 314 aa10.51□□□□□ -0.73
PCDHGA4-201ENST00000571252 ILKQ13418 452 aa10.51□□□□□ -0.73
PCDHGA4-201ENST00000571252 COL9A2Q14055 689 aaPredicted RBP10.51□□□□□ -0.73
PCDHGA4-201ENST00000571252 KLHL24Q6TFL4 600 aa10.51□□□□□ -0.73
PCDHGA4-201ENST00000571252 TCEAL8Q8IYN2 117 aa10.51□□□□□ -0.73
PCDHGA4-201ENST00000571252 SIMC1Q8NDZ2 872 aa10.51□□□□□ -0.73
PCDHGA4-201ENST00000571252 SLC38A5Q8WUX1 472 aa10.51□□□□□ -0.73
PCDHGA4-201ENST00000571252 THEM6Q8WUY1 208 aa10.51□□□□□ -0.73
PCDHGA4-201ENST00000571252 PRRC1Q96M27 445 aa10.51□□□□□ -0.73
PCDHGA4-201ENST00000571252 CLSTN3Q9BQT9 956 aa10.51□□□□□ -0.73
PCDHGA4-201ENST00000571252 THAP7Q9BT49 309 aaPredicted RBP10.51□□□□□ -0.73
PCDHGA4-201ENST00000571252 MKRN2Q9H000 416 aaKnown RBP10.51□□□□□ -0.73
PCDHGA4-201ENST00000571252 TXNL4BQ9NX01 149 aaKnown RBP10.51□□□□□ -0.73
PCDHGA4-201ENST00000571252 RBBP9O75884 186 aa10.51□□□□□ -0.73
PCDHGA4-201ENST00000571252 RHOP08100 348 aa10.51□□□□□ -0.73
PCDHGA4-201ENST00000571252 C1SP09871 688 aa10.51□□□□□ -0.73
PCDHGA4-201ENST00000571252 RPS19P39019 145 aaKnown RBP10.51□□□□□ -0.73
PCDHGA4-201ENST00000571252 GRIN2CQ14957 1233 aa10.51□□□□□ -0.73
PCDHGA4-201ENST00000571252 SCGB2B2Q4G0G5 96 aa10.51□□□□□ -0.73
PCDHGA4-201ENST00000571252 GARNL3Q5VVW2 1013 aa10.51□□□□□ -0.73
PCDHGA4-201ENST00000571252 ALKBH2Q6NS38 261 aa10.51□□□□□ -0.73
PCDHGA4-201ENST00000571252 RASGEF1AQ8N9B8 481 aa10.51□□□□□ -0.73
PCDHGA4-201ENST00000571252 YIPF6Q96EC8 236 aa10.51□□□□□ -0.73
PCDHGA4-201ENST00000571252 SLC41A3Q96GZ6 507 aa10.51□□□□□ -0.73
PCDHGA4-201ENST00000571252 SLC22A12Q96S37 553 aa10.51□□□□□ -0.73
PCDHGA4-201ENST00000571252 B3GNT4Q9C0J1 378 aa10.51□□□□□ -0.73
PCDHGA4-201ENST00000571252 ARL6Q9H0F7 186 aa10.51□□□□□ -0.73
PCDHGA4-201ENST00000571252 TRPV4Q9HBA0 871 aa10.51□□□□□ -0.73
PCDHGA4-201ENST00000571252 VNN3Q9NY84 501 aa10.51□□□□□ -0.73
PCDHGA4-201ENST00000571252 NPAP1Q9NZP6 1156 aa10.51□□□□□ -0.73
PCDHGA4-201ENST00000571252 CLEC2DQ9UHP7 191 aa10.51□□□□□ -0.73
PCDHGA4-201ENST00000571252 ANTXRLA6NF34 631 aa10.5□□□□□ -0.73
PCDHGA4-201ENST00000571252 SMAD9O15198 467 aaKnown RBP10.5□□□□□ -0.73
PCDHGA4-201ENST00000571252 FMO6PO60774 539 aa10.5□□□□□ -0.73
PCDHGA4-201ENST00000571252 BMP1P13497 986 aa10.5□□□□□ -0.73
PCDHGA4-201ENST00000571252 ACPPP15309 386 aa10.5□□□□□ -0.73
PCDHGA4-201ENST00000571252 ZNF823P16415 610 aa10.5□□□□□ -0.73
PCDHGA4-201ENST00000571252 MAPK3P27361 379 aaPredicted RBP10.5□□□□□ -0.73
PCDHGA4-201ENST00000571252 DHPSP49366 369 aaPredicted RBP10.5□□□□□ -0.73
PCDHGA4-201ENST00000571252 POU6F2P78424 691 aaPredicted RBP10.5□□□□□ -0.73
PCDHGA4-201ENST00000571252 HOXC5Q00444 222 aa10.5□□□□□ -0.73
PCDHGA4-201ENST00000571252 GAB1Q13480 694 aa10.5□□□□□ -0.73
PCDHGA4-201ENST00000571252 SMCO1Q147U7 214 aa10.5□□□□□ -0.73
PCDHGA4-201ENST00000571252 SWI5Q1ZZU3 235 aa10.5□□□□□ -0.73
PCDHGA4-201ENST00000571252 FLYWCH1Q4VC44 716 aa10.5□□□□□ -0.73
PCDHGA4-201ENST00000571252 SLC9B2Q86UD5 537 aa10.5□□□□□ -0.73
PCDHGA4-201ENST00000571252 ATCAYQ86WG3 371 aa10.5□□□□□ -0.73
PCDHGA4-201ENST00000571252 KIF18BQ86Y91 864 aa10.5□□□□□ -0.73
PCDHGA4-201ENST00000571252 OR4N5Q8IXE1 308 aa10.5□□□□□ -0.73
PCDHGA4-201ENST00000571252 CYB561A3Q8NBI2 242 aa10.5□□□□□ -0.73
PCDHGA4-201ENST00000571252 OR4F15Q8NGB8 312 aa10.5□□□□□ -0.73
PCDHGA4-201ENST00000571252 LINC00597Q9H2U6 94 aa10.5□□□□□ -0.73
PCDHGA4-201ENST00000571252 DDX31Q9H8H2 851 aaKnown RBP10.5□□□□□ -0.73
PCDHGA4-201ENST00000571252 Q9N2J8 555 aa10.5□□□□□ -0.73
PCDHGA4-201ENST00000571252 C5orf51A6NDU8 294 aa10.5□□□□□ -0.73
PCDHGA4-201ENST00000571252 TMEM221A6NGB7 291 aa10.5□□□□□ -0.73
PCDHGA4-201ENST00000571252 FAM183AA6NL82 134 aa10.5□□□□□ -0.73
PCDHGA4-201ENST00000571252 LRRTM2O43300 516 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms