RNA–Protein interactions for RNA: ENST00000569895.3

RBFOX1-219, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 3

Gene RBFOX1, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-219ENST00000569895 SNTB1Q13884 538 aaKnown RBP20.49■□□□□ 0.87
RBFOX1-219ENST00000569895 IKBIPQ70UQ0 350 aa20.49■□□□□ 0.87
RBFOX1-219ENST00000569895 GSPT2Q8IYD1 628 aaKnown RBP20.49■□□□□ 0.87
RBFOX1-219ENST00000569895 SDHAF3Q9NRP4 125 aa20.49■□□□□ 0.87
RBFOX1-219ENST00000569895 OXSMQ9NWU1 459 aa20.49■□□□□ 0.87
RBFOX1-219ENST00000569895 CRIM1Q9NZV1 1036 aa20.49■□□□□ 0.87
RBFOX1-219ENST00000569895 C19orf53Q9UNZ5 99 aaPredicted RBP20.49■□□□□ 0.87
RBFOX1-219ENST00000569895 POLR3HQ9Y535 204 aaPredicted RBP20.49■□□□□ 0.87
RBFOX1-219ENST00000569895 PLOD2O00469 737 aa20.48■□□□□ 0.87
RBFOX1-219ENST00000569895 NME6O75414 186 aaPredicted RBP20.48■□□□□ 0.87
RBFOX1-219ENST00000569895 SHBGP04278 402 aa20.48■□□□□ 0.87
RBFOX1-219ENST00000569895 TMIGD3P0DMS9 266 aaPredicted RBP20.48■□□□□ 0.87
RBFOX1-219ENST00000569895 CHMP24386 653 aa20.48■□□□□ 0.87
RBFOX1-219ENST00000569895 GRK2P25098 689 aa20.48■□□□□ 0.87
RBFOX1-219ENST00000569895 EEF1A1P68104 462 aaKnown RBP20.48■□□□□ 0.87
RBFOX1-219ENST00000569895 ZNHIT3Q15649 155 aaPredicted RBP20.48■□□□□ 0.87
RBFOX1-219ENST00000569895 FLYWCH1Q4VC44 716 aa20.48■□□□□ 0.87
RBFOX1-219ENST00000569895 EEF1A1P5Q5VTE0 462 aa20.48■□□□□ 0.87
RBFOX1-219ENST00000569895 NOXRED1Q6NXP6 359 aa20.48■□□□□ 0.87
RBFOX1-219ENST00000569895 POMZP3Q6PJE2 187 aa20.48■□□□□ 0.87
RBFOX1-219ENST00000569895 NPSR1Q6W5P4 371 aa20.48■□□□□ 0.87
RBFOX1-219ENST00000569895 PUM2Q8TB72 1066 aaKnown RBP eCLIP20.48■□□□□ 0.87
RBFOX1-219ENST00000569895 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.48■□□□□ 0.87
RBFOX1-219ENST00000569895 SFXN2Q96NB2 322 aa20.48■□□□□ 0.87
RBFOX1-219ENST00000569895 UCN2Q96RP3 112 aa20.48■□□□□ 0.87
RBFOX1-219ENST00000569895 IQCGQ9H095 443 aaKnown RBP20.48■□□□□ 0.87
RBFOX1-219ENST00000569895 ACBD3Q9H3P7 528 aa20.48■□□□□ 0.87
RBFOX1-219ENST00000569895 DDX18Q9NVP1 670 aaKnown RBP20.48■□□□□ 0.87
RBFOX1-219ENST00000569895 TUBAL3A6NHL2 446 aa20.47■□□□□ 0.87
RBFOX1-219ENST00000569895 SMIM23A6NLE4 172 aa20.47■□□□□ 0.87
RBFOX1-219ENST00000569895 EEF1E1-BLOC1S5C9J1V9 151 aa20.47■□□□□ 0.87
RBFOX1-219ENST00000569895 SLC28A1O00337 649 aa20.47■□□□□ 0.87
RBFOX1-219ENST00000569895 EEF1E1O43324 174 aaKnown RBP20.47■□□□□ 0.87
RBFOX1-219ENST00000569895 SEC22BO75396 215 aa20.47■□□□□ 0.87
RBFOX1-219ENST00000569895 KRT4P19013 534 aa20.47■□□□□ 0.87
RBFOX1-219ENST00000569895 DNAJA1P31689 397 aaKnown RBP20.47■□□□□ 0.87
RBFOX1-219ENST00000569895 MC3RP41968 323 aa20.47■□□□□ 0.87
RBFOX1-219ENST00000569895 CLK3P49761 638 aaKnown RBP20.47■□□□□ 0.87
RBFOX1-219ENST00000569895 GFRA1P56159 465 aa20.47■□□□□ 0.87
RBFOX1-219ENST00000569895 PSG6Q00889 435 aa20.47■□□□□ 0.87
RBFOX1-219ENST00000569895 DECR1Q16698 335 aa20.47■□□□□ 0.87
RBFOX1-219ENST00000569895 SH2D4BQ5SQS7 431 aa20.47■□□□□ 0.87
RBFOX1-219ENST00000569895 LIPMQ5VYY2 423 aa20.47■□□□□ 0.87
RBFOX1-219ENST00000569895 OR4K17Q8NGC6 315 aa20.47■□□□□ 0.87
RBFOX1-219ENST00000569895 GOT1L1Q8NHS2 421 aaPredicted RBP20.47■□□□□ 0.87
RBFOX1-219ENST00000569895 WNT2BQ93097 391 aa20.47■□□□□ 0.87
RBFOX1-219ENST00000569895 EFHD2Q96C19 240 aaPredicted RBP20.47■□□□□ 0.87
RBFOX1-219ENST00000569895 TUBA1CQ9BQE3 449 aa20.47■□□□□ 0.87
RBFOX1-219ENST00000569895 CLEC4MQ9H2X3 399 aaPredicted RBP20.47■□□□□ 0.87
RBFOX1-219ENST00000569895 Q9N2J8 555 aa20.47■□□□□ 0.87
RBFOX1-219ENST00000569895 RASSF1Q9NS23 344 aa20.47■□□□□ 0.87
RBFOX1-219ENST00000569895 PPP4R1LQ9P1A2 415 aa20.47■□□□□ 0.87
RBFOX1-219ENST00000569895 FBXL2Q9UKC9 423 aa20.47■□□□□ 0.87
RBFOX1-219ENST00000569895 ARHGAP21Q5T5U3 1957 aa20.46■□□□□ 0.87
RBFOX1-219ENST00000569895 TTC36A6NLP5 189 aa20.46■□□□□ 0.87
RBFOX1-219ENST00000569895 RGS14O43566 566 aa20.46■□□□□ 0.87
RBFOX1-219ENST00000569895 RCBTB2O95199 551 aa20.46■□□□□ 0.87
RBFOX1-219ENST00000569895 DPP4P27487 766 aa20.46■□□□□ 0.87
RBFOX1-219ENST00000569895 EVI2BP34910 448 aa20.46■□□□□ 0.87
RBFOX1-219ENST00000569895 AGFG1P52594 562 aaKnown RBP20.46■□□□□ 0.87
RBFOX1-219ENST00000569895 ART1P52961 327 aa20.46■□□□□ 0.87
RBFOX1-219ENST00000569895 PSMD4P55036 377 aaKnown RBP20.46■□□□□ 0.87
RBFOX1-219ENST00000569895 DSCR4P56555 118 aaPredicted RBP20.46■□□□□ 0.87
RBFOX1-219ENST00000569895 GAB1Q13480 694 aa20.46■□□□□ 0.87
RBFOX1-219ENST00000569895 OR5M10Q6IEU7 315 aa20.46■□□□□ 0.87
RBFOX1-219ENST00000569895 TMEM107Q6UX40 140 aa20.46■□□□□ 0.87
RBFOX1-219ENST00000569895 CHMP1BQ7LBR1 199 aa20.46■□□□□ 0.87
RBFOX1-219ENST00000569895 OR2L13Q8N349 312 aa20.46■□□□□ 0.87
RBFOX1-219ENST00000569895 C9orf106Q8NAJ2 232 aa20.46■□□□□ 0.87
RBFOX1-219ENST00000569895 OR4N2Q8NGD1 307 aa20.46■□□□□ 0.87
RBFOX1-219ENST00000569895 RNF138Q8WVD3 245 aa20.46■□□□□ 0.87
RBFOX1-219ENST00000569895 NINJ1Q92982 152 aa20.46■□□□□ 0.87
RBFOX1-219ENST00000569895 GPATCH1Q9BRR8 931 aaKnown RBP20.46■□□□□ 0.87
RBFOX1-219ENST00000569895 SFXN3Q9BWM7 321 aa20.46■□□□□ 0.87
RBFOX1-219ENST00000569895 GLIPR2Q9H4G4 154 aa20.46■□□□□ 0.87
RBFOX1-219ENST00000569895 C3orf14Q9HBI5 128 aa20.46■□□□□ 0.87
RBFOX1-219ENST00000569895 CBLCQ9ULV8 474 aa20.46■□□□□ 0.87
RBFOX1-219ENST00000569895 POLQO75417 2590 aa20.45■□□□□ 0.86
RBFOX1-219ENST00000569895 FREM3P0C091 2139 aa20.45■□□□□ 0.86
RBFOX1-219ENST00000569895 A6NNC1 897 aa20.45■□□□□ 0.86
RBFOX1-219ENST00000569895 UPK1AO00322 258 aa20.45■□□□□ 0.86
RBFOX1-219ENST00000569895 CHEK2O96017 543 aa20.45■□□□□ 0.86
RBFOX1-219ENST00000569895 LHX2P50458 406 aa20.45■□□□□ 0.86
RBFOX1-219ENST00000569895 SORDQ00796 357 aa20.45■□□□□ 0.86
RBFOX1-219ENST00000569895 DAZAP2Q15038 168 aaPredicted RBP20.45■□□□□ 0.86
RBFOX1-219ENST00000569895 BCL2A1Q16548 175 aa20.45■□□□□ 0.86
RBFOX1-219ENST00000569895 ELP4Q96EB1 424 aa20.45■□□□□ 0.86
RBFOX1-219ENST00000569895 AMDHD1Q96NU7 426 aa20.45■□□□□ 0.86
RBFOX1-219ENST00000569895 TRMOQ9BU70 441 aa20.45■□□□□ 0.86
RBFOX1-219ENST00000569895 LRTM1Q9HBL6 345 aa20.45■□□□□ 0.86
RBFOX1-219ENST00000569895 C1orf109Q9NX04 203 aa20.45■□□□□ 0.86
RBFOX1-219ENST00000569895 ABCG2Q9UNQ0 655 aa20.45■□□□□ 0.86
RBFOX1-219ENST00000569895 EXPH5Q8NEV8 1989 aa20.45■□□□□ 0.86
RBFOX1-219ENST00000569895 FAM221AA4D161 298 aa20.44■□□□□ 0.86
RBFOX1-219ENST00000569895 CLCA1A8K7I4 914 aa20.44■□□□□ 0.86
RBFOX1-219ENST00000569895 ZIC3O60481 467 aa20.44■□□□□ 0.86
RBFOX1-219ENST00000569895 IFI6P09912 130 aa20.44■□□□□ 0.86
RBFOX1-219ENST00000569895 EPXP11678 715 aa20.44■□□□□ 0.86
RBFOX1-219ENST00000569895 PRPH2P23942 346 aa20.44■□□□□ 0.86
RBFOX1-219ENST00000569895 STARP49675 285 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms