RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 TRILQ7L0X0 811 aa12.65□□□□□ -0.38
HERPUD1-218ENST00000569569 DOLPP1Q86YN1 238 aa12.65□□□□□ -0.38
HERPUD1-218ENST00000569569 RIMKLAQ8IXN7 391 aa12.65□□□□□ -0.38
HERPUD1-218ENST00000569569 EID3Q8N140 333 aa12.65□□□□□ -0.38
HERPUD1-218ENST00000569569 KRTCAP2Q8N6L1 136 aa12.65□□□□□ -0.38
HERPUD1-218ENST00000569569 NUP43Q8NFH3 380 aa12.65□□□□□ -0.38
HERPUD1-218ENST00000569569 OR4N2Q8NGD1 307 aa12.65□□□□□ -0.38
HERPUD1-218ENST00000569569 SH3GL2Q99962 352 aa12.65□□□□□ -0.38
HERPUD1-218ENST00000569569 LMF2Q9BU23 707 aaKnown RBP12.65□□□□□ -0.38
HERPUD1-218ENST00000569569 BHLHE41Q9C0J9 482 aaPredicted RBP12.65□□□□□ -0.38
HERPUD1-218ENST00000569569 Q9N2J8 555 aa12.65□□□□□ -0.38
HERPUD1-218ENST00000569569 ACKR4Q9NPB9 350 aa12.65□□□□□ -0.38
HERPUD1-218ENST00000569569 KLRF1Q9NZS2 232 aa12.65□□□□□ -0.38
HERPUD1-218ENST00000569569 MRTO4Q9UKD2 239 aaKnown RBP12.65□□□□□ -0.38
HERPUD1-218ENST00000569569 CBLCQ9ULV8 474 aa12.65□□□□□ -0.38
HERPUD1-218ENST00000569569 MED12Q93074 2177 aa12.64□□□□□ -0.39
HERPUD1-218ENST00000569569 TRGV5A0A0B4J1U4 118 aa12.64□□□□□ -0.39
HERPUD1-218ENST00000569569 TRPC5OSA6NMA1 111 aa12.64□□□□□ -0.39
HERPUD1-218ENST00000569569 AQP7O14520 342 aa12.64□□□□□ -0.39
HERPUD1-218ENST00000569569 HDAC3O15379 428 aa12.64□□□□□ -0.39
HERPUD1-218ENST00000569569 CELA3AP09093 270 aa12.64□□□□□ -0.39
HERPUD1-218ENST00000569569 KITP10721 976 aa12.64□□□□□ -0.39
HERPUD1-218ENST00000569569 GP1BBP13224 206 aa12.64□□□□□ -0.39
HERPUD1-218ENST00000569569 EFNA1P20827 205 aaPredicted RBP12.64□□□□□ -0.39
HERPUD1-218ENST00000569569 ELAVL4P26378 380 aaKnown RBP12.64□□□□□ -0.39
HERPUD1-218ENST00000569569 PTGDSP41222 190 aa12.64□□□□□ -0.39
HERPUD1-218ENST00000569569 MAN2A2P49641 1150 aa12.64□□□□□ -0.39
HERPUD1-218ENST00000569569 PRKAG1P54619 331 aa12.64□□□□□ -0.39
HERPUD1-218ENST00000569569 DIO3P55073 304 aa12.64□□□□□ -0.39
HERPUD1-218ENST00000569569 PRR5P85299 388 aa12.64□□□□□ -0.39
HERPUD1-218ENST00000569569 OCRLQ01968 901 aa12.64□□□□□ -0.39
HERPUD1-218ENST00000569569 DECR1Q16698 335 aa12.64□□□□□ -0.39
HERPUD1-218ENST00000569569 VPS26BQ4G0F5 336 aa12.64□□□□□ -0.39
HERPUD1-218ENST00000569569 TTMPQ5BVD1 217 aa12.64□□□□□ -0.39
HERPUD1-218ENST00000569569 FNDC7Q5VTL7 733 aa12.64□□□□□ -0.39
HERPUD1-218ENST00000569569 TIGD3Q6B0B8 471 aa12.64□□□□□ -0.39
HERPUD1-218ENST00000569569 ZCCHC12Q6PEW1 402 aa12.64□□□□□ -0.39
HERPUD1-218ENST00000569569 CAMKMTQ7Z624 323 aa12.64□□□□□ -0.39
HERPUD1-218ENST00000569569 CD163Q86VB7 1156 aa12.64□□□□□ -0.39
HERPUD1-218ENST00000569569 CDRT4Q8N9R6 151 aa12.64□□□□□ -0.39
HERPUD1-218ENST00000569569 OR1J4Q8NGS1 313 aa12.64□□□□□ -0.39
HERPUD1-218ENST00000569569 NUDT8Q8WV74 236 aa12.64□□□□□ -0.39
HERPUD1-218ENST00000569569 OR5P2Q8WZ92 322 aa12.64□□□□□ -0.39
HERPUD1-218ENST00000569569 ZNF75CPQ92670 426 aaPredicted RBP12.64□□□□□ -0.39
HERPUD1-218ENST00000569569 HOXB13Q92826 284 aaPredicted RBP12.64□□□□□ -0.39
HERPUD1-218ENST00000569569 CCDC120Q96HB5 630 aa12.64□□□□□ -0.39
HERPUD1-218ENST00000569569 GNRHR2Q96P88 292 aa12.64□□□□□ -0.39
HERPUD1-218ENST00000569569 DUSP26Q9BV47 211 aa12.64□□□□□ -0.39
HERPUD1-218ENST00000569569 OSBPL11Q9BXB4 747 aa12.64□□□□□ -0.39
HERPUD1-218ENST00000569569 DPY30Q9C005 99 aa12.64□□□□□ -0.39
HERPUD1-218ENST00000569569 EXO5Q9H790 373 aa12.64□□□□□ -0.39
HERPUD1-218ENST00000569569 EQTNQ9NQ60 294 aa12.64□□□□□ -0.39
HERPUD1-218ENST00000569569 MEMO1Q9Y316 297 aa12.64□□□□□ -0.39
HERPUD1-218ENST00000569569 LIPGQ9Y5X9 500 aa12.64□□□□□ -0.39
HERPUD1-218ENST00000569569 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.63□□□□□ -0.39
HERPUD1-218ENST00000569569 PRAMEF25A6NGN4 478 aa12.63□□□□□ -0.39
HERPUD1-218ENST00000569569 HMGB1P1B2RPK0 211 aaPredicted RBP12.63□□□□□ -0.39
HERPUD1-218ENST00000569569 NPIPA2E9PIF3 369 aa12.63□□□□□ -0.39
HERPUD1-218ENST00000569569 E9PLN8 166 aa12.63□□□□□ -0.39
HERPUD1-218ENST00000569569 NPIPA3F8WFD2 350 aa12.63□□□□□ -0.39
HERPUD1-218ENST00000569569 SDHDO14521 159 aa12.63□□□□□ -0.39
HERPUD1-218ENST00000569569 GNB5O14775 395 aa12.63□□□□□ -0.39
HERPUD1-218ENST00000569569 BCKDKO14874 412 aa12.63□□□□□ -0.39
HERPUD1-218ENST00000569569 GDF1P27539 372 aa12.63□□□□□ -0.39
HERPUD1-218ENST00000569569 GABRA3P34903 492 aa12.63□□□□□ -0.39
HERPUD1-218ENST00000569569 MAP3K8P41279 467 aa12.63□□□□□ -0.39
HERPUD1-218ENST00000569569 PSMD4P55036 377 aaKnown RBP12.63□□□□□ -0.39
HERPUD1-218ENST00000569569 GXYLT1Q4G148 440 aa12.63□□□□□ -0.39
HERPUD1-218ENST00000569569 OGFOD2Q6N063 350 aa12.63□□□□□ -0.39
HERPUD1-218ENST00000569569 ANGPTL8Q6UXH0 198 aa12.63□□□□□ -0.39
HERPUD1-218ENST00000569569 SZRD1Q7Z422 152 aa12.63□□□□□ -0.39
HERPUD1-218ENST00000569569 WDR53Q7Z5U6 358 aaPredicted RBP12.63□□□□□ -0.39
HERPUD1-218ENST00000569569 WDR75Q8IWA0 830 aaKnown RBP12.63□□□□□ -0.39
HERPUD1-218ENST00000569569 PSMA8Q8TAA3 256 aa12.63□□□□□ -0.39
HERPUD1-218ENST00000569569 PIWIL2Q8TC59 973 aaKnown RBP12.63□□□□□ -0.39
HERPUD1-218ENST00000569569 SARAFQ96BY9 339 aa12.63□□□□□ -0.39
HERPUD1-218ENST00000569569 EFHD2Q96C19 240 aaPredicted RBP12.63□□□□□ -0.39
HERPUD1-218ENST00000569569 FAM120BQ96EK7 910 aaKnown RBP12.63□□□□□ -0.39
HERPUD1-218ENST00000569569 GIMAP5Q96F15 307 aa12.63□□□□□ -0.39
HERPUD1-218ENST00000569569 MS4A4EQ96PG1 132 aa12.63□□□□□ -0.39
HERPUD1-218ENST00000569569 VKORC1Q9BQB6 163 aa12.63□□□□□ -0.39
HERPUD1-218ENST00000569569 UBQLN3Q9H347 655 aa12.63□□□□□ -0.39
HERPUD1-218ENST00000569569 GALNT9Q9HCQ5 603 aa12.63□□□□□ -0.39
HERPUD1-218ENST00000569569 SIRT3Q9NTG7 399 aaPredicted RBP12.63□□□□□ -0.39
HERPUD1-218ENST00000569569 MARCOQ9UEW3 520 aaPredicted RBP12.63□□□□□ -0.39
HERPUD1-218ENST00000569569 PLEKHB1Q9UF11 243 aaPredicted RBP12.63□□□□□ -0.39
HERPUD1-218ENST00000569569 A1L4Q6 167 aa12.62□□□□□ -0.39
HERPUD1-218ENST00000569569 C2orf72A6NCS6 295 aa12.62□□□□□ -0.39
HERPUD1-218ENST00000569569 SNPHO15079 494 aa12.62□□□□□ -0.39
HERPUD1-218ENST00000569569 CBR3O75828 277 aa12.62□□□□□ -0.39
HERPUD1-218ENST00000569569 TRAPPC6AO75865 159 aa12.62□□□□□ -0.39
HERPUD1-218ENST00000569569 NKX2-2O95096 273 aa12.62□□□□□ -0.39
HERPUD1-218ENST00000569569 KCNH1O95259 989 aa12.62□□□□□ -0.39
HERPUD1-218ENST00000569569 IL33O95760 270 aa12.62□□□□□ -0.39
HERPUD1-218ENST00000569569 C6orf47O95873 294 aa12.62□□□□□ -0.39
HERPUD1-218ENST00000569569 HPNP05981 417 aa12.62□□□□□ -0.39
HERPUD1-218ENST00000569569 CYP4B1P13584 511 aa12.62□□□□□ -0.39
HERPUD1-218ENST00000569569 PTPN6P29350 595 aa12.62□□□□□ -0.39
HERPUD1-218ENST00000569569 CCT3P49368 545 aaKnown RBP12.62□□□□□ -0.39
HERPUD1-218ENST00000569569 PRIM2P49643 509 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms